RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 ZNF573Q86YE8 665 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 CLEC18CQ8NCF0 446 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 MBD3L1Q8WWY6 194 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 SPTSSAQ969W0 71 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 GPHA2Q96T91 129 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 OR51B6Q9H340 312 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 ZNF442Q9H7R0 627 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 RTTNQ86VV8 2226 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 H3BP45 60 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 OTX1P32242 354 aaPredicted RBP12.89□□□□□ -0.35
XRCC1-201ENST00000262887 GALR1P47211 349 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 MRPS34P82930 218 aaKnown RBP12.89□□□□□ -0.35
XRCC1-201ENST00000262887 Q6ZPA2 131 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 PLPPR1Q8TBJ4 325 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 OR5B12Q96R08 314 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 SMIM7Q9BQ49 75 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 SLC7A10Q9NS82 523 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 AQP7P3A6NL99 342 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 TNFSF12O43508 249 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 PAX9P55771 341 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 FAM3BP58499 235 aaPredicted RBP12.89□□□□□ -0.35
XRCC1-201ENST00000262887 RBX1P62877 108 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 MRPS21P82921 87 aaKnown RBP12.89□□□□□ -0.35
XRCC1-201ENST00000262887 NMSQ5H8A3 153 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 OR51G1Q8NGK1 321 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 TMEM37Q8WXS4 190 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 RSG1Q9BU20 258 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 VSIRQ9H7M9 311 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 METTL7AQ9H8H3 244 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 MYOTQ9UBF9 498 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 PRSS50Q9UI38 385 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 PCDH15Q96QU1 1955 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 IGKV1-12A0A0C4DH73 117 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 A0A1B0GX78 115 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 TMEM210A6NLX4 147 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 PDCD6O75340 191 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 IGKV1D-12P01611 117 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 VDAC1P21796 283 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 SHBQ15464 509 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 OR8B8Q15620 311 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 ZNF726P1Q15940 193 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 TMEM241Q24JQ0 296 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 MRGPRGQ86SM5 289 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 CPEB3Q8NE35 698 aaKnown RBP12.89□□□□□ -0.35
XRCC1-201ENST00000262887 RBM24Q9BX46 236 aaKnown RBP12.89□□□□□ -0.35
XRCC1-201ENST00000262887 Q9N2K0 584 aa12.89□□□□□ -0.35
XRCC1-201ENST00000262887 DUXBA0A1W2PPF3 345 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 H7BYZ3 331 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 IFNA1P01562 189 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 TCN2P20062 427 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 NPBWR2P48146 333 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 CCR5P51681 352 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 PHYHD1Q5SRE7 291 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 C1orf194Q5T5A4 169 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 LHFPL2Q6ZUX7 228 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 SCGB1C1Q8TD33 95 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 DIRC2Q96SL1 478 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 PCGF1Q9BSM1 259 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 PLSCR2Q9NRY7 297 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 RNF115Q9Y4L5 304 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 SCGB1D1O95968 90 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 BSXQ3C1V8 233 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 TMEM211Q6ICI0 200 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 FAM180AQ6UWF9 173 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 ZNF818PQ6ZRF7 136 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 CYP2G1PQ6ZSU1 146 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 SSX7Q7RTT5 188 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 RABEPKQ7Z6M1 372 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 WDR5BQ86VZ2 330 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 NABP1Q96AH0 204 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 AGMATQ9BSE5 352 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 PARD6AQ9NPB6 346 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 SEMA5BQ9P283 1151 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 FUT9Q9Y231 359 aa12.88□□□□□ -0.35
XRCC1-201ENST00000262887 EXPH5Q8NEV8 1989 aa12.87□□□□□ -0.35
XRCC1-201ENST00000262887 B4E171 279 aa12.87□□□□□ -0.35
XRCC1-201ENST00000262887 TMEM267Q0VDI3 215 aaPredicted RBP12.87□□□□□ -0.35
XRCC1-201ENST00000262887 GAPTQ8N292 157 aa12.87□□□□□ -0.35
XRCC1-201ENST00000262887 C22orf15Q8WYQ4 148 aa12.87□□□□□ -0.35
XRCC1-201ENST00000262887 RBKSQ9H477 322 aa12.87□□□□□ -0.35
XRCC1-201ENST00000262887 FKBP11Q9NYL4 201 aa12.87□□□□□ -0.35
XRCC1-201ENST00000262887 RNF150Q9ULK6 438 aa12.87□□□□□ -0.35
XRCC1-201ENST00000262887 TRBV11-1A0A0K0K1C0 115 aa12.87□□□□□ -0.35
XRCC1-201ENST00000262887 TCF21O43680 179 aa12.87□□□□□ -0.35
XRCC1-201ENST00000262887 OR7C1O76099 320 aaPredicted RBP12.87□□□□□ -0.35
XRCC1-201ENST00000262887 CST2P09228 141 aa12.87□□□□□ -0.35
XRCC1-201ENST00000262887 DRD1P21728 446 aa12.87□□□□□ -0.35
XRCC1-201ENST00000262887 CLEC12BQ2HXU8 276 aa12.87□□□□□ -0.35
XRCC1-201ENST00000262887 DEFB133Q30KQ1 61 aa12.87□□□□□ -0.35
XRCC1-201ENST00000262887 ACOT6Q3I5F7 207 aaPredicted RBP12.87□□□□□ -0.35
XRCC1-201ENST00000262887 ACTL10Q5JWF8 245 aa12.87□□□□□ -0.35
XRCC1-201ENST00000262887 FAM69BQ5VUD6 431 aa12.87□□□□□ -0.35
XRCC1-201ENST00000262887 FBXW9Q5XUX1 488 aa12.87□□□□□ -0.35
XRCC1-201ENST00000262887 OR10G3Q8NGC4 313 aa12.87□□□□□ -0.35
XRCC1-201ENST00000262887 RALGAPA1Q6GYQ0 2036 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 A0A1W2PPQ1 181 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 EPOPA6NHQ4 379 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 ITGB1BP1O14713 200 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 RPS18P62269 152 aaKnown RBP12.86□□□□□ -0.35
XRCC1-201ENST00000262887 SHHQ15465 462 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms