RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 ST6GALNAC2Q9UJ37 374 aa12.05□□□□□ -0.48
CDH1-201ENST00000261769 SYNGR1O43759 233 aa12.05□□□□□ -0.48
CDH1-201ENST00000261769 ARG1P05089 322 aa12.05□□□□□ -0.48
CDH1-201ENST00000261769 ISG15P05161 165 aa12.05□□□□□ -0.48
CDH1-201ENST00000261769 TAGLNQ01995 201 aaKnown RBP12.05□□□□□ -0.48
CDH1-201ENST00000261769 HIST2H3PS2Q5TEC6 136 aa12.05□□□□□ -0.48
CDH1-201ENST00000261769 DBX2Q6ZNG2 339 aa12.05□□□□□ -0.48
CDH1-201ENST00000261769 GVQW1Q8N7I0 195 aa12.05□□□□□ -0.48
CDH1-201ENST00000261769 SMCO4Q9NRQ5 59 aa12.05□□□□□ -0.48
CDH1-201ENST00000261769 TRBV23-1A0A0A0MS06 115 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 CTDSPLO15194 276 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 NAT2P11245 290 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 PI4KAP42356 2102 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 DHRS2Q13268 280 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 SLC25A53Q5H9E4 307 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 MARC2Q969Z3 335 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 GNG7O60262 68 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 DUS4LO95620 317 aaKnown RBP12.04□□□□□ -0.48
CDH1-201ENST00000261769 OR5AC1P0C628 307 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 VDAC1P21796 283 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 IRF3Q14653 427 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 TMED6Q8WW62 240 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 AICDAQ9GZX7 198 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 LSM2Q9Y333 95 aaKnown RBP12.04□□□□□ -0.48
CDH1-201ENST00000261769 UBE2L5PA0A1B0GUS4 154 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 UMAD1C9J7I0 102 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 EGR4Q05215 589 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 SLC38A11Q08AI6 406 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 ATP6V1FQ16864 119 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 Q9N2K0 584 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 MRPL22Q9NWU5 206 aaKnown RBP12.04□□□□□ -0.48
CDH1-201ENST00000261769 GNG13Q9P2W3 67 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 ARHGEF17Q96PE2 2063 aaPredicted RBP12.04□□□□□ -0.48
CDH1-201ENST00000261769 A0A0G2JMM0 328 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 A0A1W2PPB8 328 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 A0A1W2PRS3 328 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 KIR3DP1A8MWS1 328 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 AKR1C3P42330 323 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 NANOS3P60323 173 aaKnown RBP12.04□□□□□ -0.48
CDH1-201ENST00000261769 PPP1R1AQ13522 171 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 ZNF787Q6DD87 383 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 TXN2Q99757 166 aa12.04□□□□□ -0.48
CDH1-201ENST00000261769 ANKRD20A5PA0PJZ0 165 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 KRBOX1C9JBD0 128 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 TMEM30BQ3MIR4 351 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 TBC1D26Q86UD7 250 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 OR52B4Q8NGK2 314 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 OR1L8Q8NGR8 309 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 AP1S3Q96PC3 154 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 PDCD11Q14690 1871 aaKnown RBP12.03□□□□□ -0.48
CDH1-201ENST00000261769 SMLR1H3BR10 107 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 OPN1MWP04001 364 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 OPN1MW2P0DN77 364 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 OPN1MW3P0DN78 364 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 SAXO1Q8IYX7 474 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 OR1L4Q8NGR5 311 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 ABHD14AQ9BUJ0 271 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 PATZ1Q9HBE1 687 aaKnown RBP12.03□□□□□ -0.48
CDH1-201ENST00000261769 RHOFQ9HBH0 211 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 LOC105371242A0A075B767 164 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 ZNF320A2RRD8 509 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 LIAT1Q6ZQX7 453 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 ZNF826PQ6ZT77 177 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 BSCL2Q96G97 398 aaPredicted RBP12.03□□□□□ -0.48
CDH1-201ENST00000261769 PPIAL4CA0A0B4J2A2 164 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 PPIAL4GP0DN37 164 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 SLC25A4P12235 298 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 GGNBP1Q5YKI7 109 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 C9orf106Q8NAJ2 232 aa12.03□□□□□ -0.48
CDH1-201ENST00000261769 WDR89Q96FK6 387 aaPredicted RBP12.03□□□□□ -0.48
CDH1-201ENST00000261769 CECR9P0C854 216 aa12.02□□□□□ -0.48
CDH1-201ENST00000261769 CNN1P51911 297 aaKnown RBP12.02□□□□□ -0.48
CDH1-201ENST00000261769 FNDC7Q5VTL7 733 aa12.02□□□□□ -0.48
CDH1-201ENST00000261769 SAMD10Q9BYL1 202 aa12.02□□□□□ -0.48
CDH1-201ENST00000261769 TMEM231Q9H6L2 316 aa12.02□□□□□ -0.48
CDH1-201ENST00000261769 CCL28Q9NRJ3 127 aa12.02□□□□□ -0.48
CDH1-201ENST00000261769 C9orf170A2RU37 121 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 LEUTXA8MZ59 168 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 GSTZ1O43708 216 aaPredicted RBP12.02□□□□□ -0.49
CDH1-201ENST00000261769 LIPFP07098 398 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 PHYHD1Q5SRE7 291 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 GAPTQ8N292 157 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 ABHD1Q96SE0 405 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 KCNK15Q9H427 330 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 ZNF331Q9NQX6 463 aaPredicted RBP12.02□□□□□ -0.49
CDH1-201ENST00000261769 MTCL1Q9Y4B5 1905 aaKnown RBP12.02□□□□□ -0.49
CDH1-201ENST00000261769 IGLV3-32A0A0A0MS00 114 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 TRAV39A0A0B4J263 110 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 NUPL2O15504 423 aaKnown RBP12.02□□□□□ -0.49
CDH1-201ENST00000261769 NEURL1O76050 574 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 WFDC6Q9BQY6 131 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 TMEM208Q9BTX3 173 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 PARP12Q9H0J9 701 aaKnown RBP12.02□□□□□ -0.49
CDH1-201ENST00000261769 SEMA5BQ9P283 1151 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 ALPK2Q86TB3 2170 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 RAB4AP20338 218 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 HTR1DP28221 377 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 GSX2Q9BZM3 304 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 SLC45A2Q9UMX9 530 aa12.02□□□□□ -0.49
CDH1-201ENST00000261769 GREB1Q4ZG55 1949 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms