RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 AVPR2P30518 371 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 CDC34P49427 236 aaPredicted RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 RPS4XP62701 263 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 MOB3BQ86TA1 216 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 KCNK17Q96T54 332 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 IFT22Q9H7X7 185 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 RCL1Q9Y2P8 373 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 SMAD9O15198 467 aaKnown RBP3.78□□□□□ -1.81
VPS13C-202ENST00000261517 GGCTO75223 188 aaKnown RBP3.78□□□□□ -1.81
VPS13C-202ENST00000261517 SLC35E4Q6ICL7 350 aa3.78□□□□□ -1.81
VPS13C-202ENST00000261517 UNQ9370/PRO34162Q6UXP9 181 aa3.78□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF645Q8N7E2 425 aa3.78□□□□□ -1.81
VPS13C-202ENST00000261517 CELF2-AS1Q8N7Q2 184 aa3.78□□□□□ -1.81
VPS13C-202ENST00000261517 NUDCD2Q8WVJ2 157 aa3.78□□□□□ -1.81
VPS13C-202ENST00000261517 TTTY12Q9BZ98 90 aa3.78□□□□□ -1.81
VPS13C-202ENST00000261517 PYCARD-AS1I3L0S3 204 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 F2RL2O00254 374 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 SYNGR2O43760 224 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 HOXA4Q00056 320 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-202ENST00000261517 KLRB1Q12918 225 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 CLEC2AQ6UVW9 174 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 OR5AS1Q8N127 324 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 OR10AD1Q8NGE0 317 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 C20orf141Q9NUB4 165 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 FOXH1O75593 365 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 S1PR2O95136 353 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 PPYP01298 95 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 CLEC2LP0C7M8 214 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 PMCHP20382 165 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 GPR6P46095 362 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-202ENST00000261517 ETFDHQ16134 617 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 RPEL1Q2QD12 228 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 CORO6Q6QEF8 472 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 PQLC2Q6ZP29 291 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 TMEM182Q6ZP80 229 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-202ENST00000261517 FAM169BQ8N8A8 192 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 JMJD8Q96S16 334 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 TNFSF18Q9UNG2 199 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 A0A096LPE4 126 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 A0A1W2PPZ6 126 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 TMEM229AB2RXF0 380 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 KCNAB3O43448 404 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 KIR3DL2P43630 455 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 HIST1H3AP68431 136 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF658BQ4V348 819 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-202ENST00000261517 TMEM186Q96B77 213 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 PLSCR2Q9NRY7 297 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 ONECUT1Q9UBC0 465 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 G3V3Y1 287 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 M0R143 59 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 SSTR2P30874 369 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 KLF9Q13886 244 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-202ENST00000261517 ETV3LQ6ZN32 361 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 Q6ZT83 130 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 SPNS2Q8IVW8 549 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 MRGPRDQ8TDS7 321 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 C14orf79Q96F83 325 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 PIMREGQ9BSJ6 248 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 PSMG3Q9BT73 122 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-202ENST00000261517 MTCH1Q9NZJ7 389 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 A0A1W2PR77 199 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 RER1O15258 196 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 SYNGR1O43759 233 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 FAM157BP0CG42 384 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 DNM1P46Q6ZS02 220 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 TGIF2LYQ8IUE0 185 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 TGIF2LXQ8IUE1 241 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 R3HDM4Q96D70 268 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 BSCL2Q96G97 398 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-202ENST00000261517 SEC22AQ96IW7 307 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 MAP1LC3B2A6NCE7 125 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 TSPOP30536 169 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 INPP5JQ15735 1006 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-202ENST00000261517 MAP1LC3BQ9GZQ8 125 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 FLRT3Q9NZU0 649 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 FRRS1LQ9P0K9 344 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 MFNGO00587 321 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 SYNGR3O43761 229 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 SPEM2Q0P670 501 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 DEFB124Q8NES8 71 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 HSPB6O14558 160 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 IGKV3-11P04433 115 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 PPP1CCP36873 323 aaKnown RBP3.77□□□□□ -1.81
VPS13C-202ENST00000261517 SUMO1P63165 101 aaKnown RBP3.77□□□□□ -1.81
VPS13C-202ENST00000261517 PSG9Q00887 426 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 OR4D10Q8NGI6 311 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 TNFRSF14Q92956 283 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 TEX50A0A1B0GTY4 177 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 LEUTXA8MZ59 168 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 SOX8P57073 446 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 RPL8P62917 257 aaKnown RBP3.77□□□□□ -1.81
VPS13C-202ENST00000261517 RELQ04864 619 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-202ENST00000261517 GAMTQ14353 236 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 TOR2AQ5JU69 321 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 FA2HQ7L5A8 372 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 SLC35E3Q7Z769 313 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 OR2D2Q9H210 308 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 ST6GALNAC2Q9UJ37 374 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 KCNE3Q9Y6H6 103 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 SEC14L6B5MCN3 397 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms