RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 PRRC2CQ9Y520 2896 aaKnown RBP13.66□□□□□ -0.22
LMNB1-201ENST00000261366 SLC22A20A6NK97 555 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 CYB5R3P00387 301 aaPredicted RBP13.65□□□□□ -0.22
LMNB1-201ENST00000261366 RPS16P62249 146 aaKnown RBP13.65□□□□□ -0.22
LMNB1-201ENST00000261366 ZNF726P1Q15940 193 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 SCGB1C1Q8TD33 95 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 ELOVL1Q9BW60 279 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 RBKSQ9H477 322 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 TAAR3PQ9P1P4 343 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 SOX15O60248 233 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 PIAS2O75928 621 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 BCL3P20749 454 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 HERPUD1Q15011 391 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 RHBDD2Q6NTF9 364 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 PLPPR1Q8TBJ4 325 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 CHRNA10Q9GZZ6 450 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 A0A1W2PPQ1 181 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 XKRY2A2RUG3 117 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 ETV2O00321 342 aaPredicted RBP13.65□□□□□ -0.22
LMNB1-201ENST00000261366 CCL3P10147 92 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 VDAC1P21796 283 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 BMP5P22003 454 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 ZFP36L1Q07352 338 aaKnown RBP13.65□□□□□ -0.22
LMNB1-201ENST00000261366 ZNF66Q6ZN08 573 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 ZIC4Q8N9L1 334 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 SRXN1Q9BYN0 137 aa13.65□□□□□ -0.22
LMNB1-201ENST00000261366 A0A0J9YW62 118 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 CNOT4O95628 575 aaKnown RBP13.64□□□□□ -0.23
LMNB1-201ENST00000261366 IDH3GP51553 393 aaPredicted RBP13.64□□□□□ -0.23
LMNB1-201ENST00000261366 UCP3P55916 312 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 SRPXP78539 464 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 ID3Q02535 119 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 EXT1Q16394 746 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 NMSQ5H8A3 153 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 C10orf128Q5T292 105 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 SLC23A3Q6PIS1 610 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 OR13D1Q8NGV5 346 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 TMEM54Q969K7 222 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 SMIM7Q9BQ49 75 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 DKKL1Q9UK85 242 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 EREGO14944 169 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 GALR2O43603 387 aaPredicted RBP13.64□□□□□ -0.23
LMNB1-201ENST00000261366 SYNGR3O43761 229 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 CRYGSP22914 178 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 ARL16Q0P5N6 197 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 HLA-BQ31612 363 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 C16orf82Q7Z2V1 217 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 WDR5BQ86VZ2 330 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 SLC25A45Q8N413 288 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 OR10A7Q8NGE5 316 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 TMEM56Q96MV1 263 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 HIST1H2AAQ96QV6 131 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 SDF2L1Q9HCN8 221 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 Q9N2K0 584 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 AURKAIP1Q9NWT8 199 aaPredicted RBP13.64□□□□□ -0.23
LMNB1-201ENST00000261366 PITPNC1Q9UKF7 332 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 CHCHD2Q9Y6H1 151 aaPredicted RBP13.64□□□□□ -0.23
LMNB1-201ENST00000261366 R4GN57 208 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 TMEM56-RWDD3S4R434 201 aa13.64□□□□□ -0.23
LMNB1-201ENST00000261366 COL5A1P20908 1838 aaPredicted RBP13.64□□□□□ -0.23
LMNB1-201ENST00000261366 DOCK11Q5JSL3 2073 aa13.63□□□□□ -0.23
LMNB1-201ENST00000261366 HS3ST1O14792 307 aa13.63□□□□□ -0.23
LMNB1-201ENST00000261366 TCAPO15273 167 aa13.63□□□□□ -0.23
LMNB1-201ENST00000261366 PSG2P11465 335 aa13.63□□□□□ -0.23
LMNB1-201ENST00000261366 GPM6AP51674 278 aa13.63□□□□□ -0.23
LMNB1-201ENST00000261366 H3F3AP84243 136 aa13.63□□□□□ -0.23
LMNB1-201ENST00000261366 PSG4Q00888 419 aa13.63□□□□□ -0.23
LMNB1-201ENST00000261366 DAZAP2Q15038 168 aaPredicted RBP13.63□□□□□ -0.23
LMNB1-201ENST00000261366 IGFBP7Q16270 282 aa13.63□□□□□ -0.23
LMNB1-201ENST00000261366 Q6ZRM9 215 aa13.63□□□□□ -0.23
LMNB1-201ENST00000261366 RCC1LQ96I51 464 aaKnown RBP13.63□□□□□ -0.23
LMNB1-201ENST00000261366 ZNF488Q96MN9 340 aa13.63□□□□□ -0.23
LMNB1-201ENST00000261366 CRIM1Q9NZV1 1036 aa13.63□□□□□ -0.23
LMNB1-201ENST00000261366 OR14J1Q9UGF5 321 aa13.63□□□□□ -0.23
LMNB1-201ENST00000261366 SERPINE2P07093 398 aa13.63□□□□□ -0.23
LMNB1-201ENST00000261366 DEFA4P12838 97 aa13.63□□□□□ -0.23
LMNB1-201ENST00000261366 NR2C1P13056 603 aa13.63□□□□□ -0.23
LMNB1-201ENST00000261366 YRDCQ86U90 279 aaKnown RBP13.63□□□□□ -0.23
LMNB1-201ENST00000261366 GPR146Q96CH1 333 aa13.63□□□□□ -0.23
LMNB1-201ENST00000261366 PCGF1Q9BSM1 259 aa13.63□□□□□ -0.23
LMNB1-201ENST00000261366 RAB35Q15286 201 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 FAM27BQ5VT28 67 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 TMEM211Q6ICI0 200 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 OR8G2PQ6IF36 304 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 TMEM183AQ8IXX5 376 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 OR8G5Q8NG78 346 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 RDH5Q92781 318 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 FREM1Q5H8C1 2179 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 IGKV1-6A0A0C4DH72 117 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 ARGFXA6NJG6 315 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 GZMHP20718 246 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 FGF7P21781 194 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 IL24Q13007 206 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 SPANXN5Q5MJ07 72 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 NCR3LG1Q68D85 454 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 GATAD1Q8WUU5 269 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 IER2Q9BTL4 223 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 CACNG5Q9UF02 275 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 RNF115Q9Y4L5 304 aa13.62□□□□□ -0.23
LMNB1-201ENST00000261366 WDFY4Q6ZS81 3184 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms