RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 ZNF565Q8N9K5 539 aa23.3■■□□□ 1.32
CCM2-201ENST00000258781 MBNL3Q9NUK0 354 aaKnown RBP23.3■■□□□ 1.32
CCM2-201ENST00000258781 RP2O75695 350 aa23.29■■□□□ 1.32
CCM2-201ENST00000258781 OR2F2O95006 317 aa23.29■■□□□ 1.32
CCM2-201ENST00000258781 HOXB5P09067 269 aa23.29■■□□□ 1.32
CCM2-201ENST00000258781 OR5AC1P0C628 307 aa23.29■■□□□ 1.32
CCM2-201ENST00000258781 OR2F1Q13607 317 aa23.29■■□□□ 1.32
CCM2-201ENST00000258781 LRRC29Q8WV35 223 aa23.29■■□□□ 1.32
CCM2-201ENST00000258781 OR10C1Q96KK4 312 aa23.29■■□□□ 1.32
CCM2-201ENST00000258781 TRAPPC2LQ9UL33 140 aa23.29■■□□□ 1.32
CCM2-201ENST00000258781 GNLYP22749 145 aa23.28■■□□□ 1.32
CCM2-201ENST00000258781 CHRNB4P30926 498 aa23.28■■□□□ 1.32
CCM2-201ENST00000258781 GNRHRP30968 328 aa23.28■■□□□ 1.32
CCM2-201ENST00000258781 EXOSC2Q13868 293 aaKnown RBP23.28■■□□□ 1.32
CCM2-201ENST00000258781 ATXN7L3Q14CW9 347 aaPredicted RBP23.28■■□□□ 1.32
CCM2-201ENST00000258781 H1FOOQ8IZA3 346 aaPredicted RBP23.28■■□□□ 1.32
CCM2-201ENST00000258781 OR11L1Q8NGX0 322 aa23.28■■□□□ 1.32
CCM2-201ENST00000258781 OR10J5Q8NHC4 309 aa23.28■■□□□ 1.32
CCM2-201ENST00000258781 FAM210AQ96ND0 272 aa23.28■■□□□ 1.32
CCM2-201ENST00000258781 MBD2Q9UBB5 411 aa23.28■■□□□ 1.32
CCM2-201ENST00000258781 MPTX1A8MV57 137 aa23.28■■□□□ 1.32
CCM2-201ENST00000258781 IFNA21P01568 189 aa23.28■■□□□ 1.32
CCM2-201ENST00000258781 CEBPDP49716 269 aaPredicted RBP23.28■■□□□ 1.32
CCM2-201ENST00000258781 LDLRAD3Q86YD5 345 aa23.28■■□□□ 1.32
CCM2-201ENST00000258781 FAM90A1Q86YD7 464 aa23.28■■□□□ 1.32
CCM2-201ENST00000258781 KCNRGQ8N5I3 272 aa23.28■■□□□ 1.32
CCM2-201ENST00000258781 SECTM1Q8WVN6 248 aa23.28■■□□□ 1.32
CCM2-201ENST00000258781 MEGF10Q96KG7 1140 aa23.28■■□□□ 1.32
CCM2-201ENST00000258781 MRPL37Q9BZE1 423 aaKnown RBP23.28■■□□□ 1.32
CCM2-201ENST00000258781 UBQLN2Q9UHD9 624 aa23.28■■□□□ 1.32
CCM2-201ENST00000258781 MAB21L2Q9Y586 359 aa23.28■■□□□ 1.32
CCM2-201ENST00000258781 TMEM30CPA0ZSE6 113 aa23.27■■□□□ 1.32
CCM2-201ENST00000258781 FAM90A27PA6NNH2 459 aa23.27■■□□□ 1.32
CCM2-201ENST00000258781 GPR31O00270 319 aa23.27■■□□□ 1.32
CCM2-201ENST00000258781 PSPNO60542 156 aa23.27■■□□□ 1.32
CCM2-201ENST00000258781 PRB1P04280 392 aa23.27■■□□□ 1.32
CCM2-201ENST00000258781 IL15RAQ13261 267 aa23.27■■□□□ 1.32
CCM2-201ENST00000258781 HMGN3Q15651 99 aa23.27■■□□□ 1.32
CCM2-201ENST00000258781 LIAT1Q6ZQX7 453 aa23.27■■□□□ 1.32
CCM2-201ENST00000258781 WFDC8Q8IUA0 241 aa23.27■■□□□ 1.32
CCM2-201ENST00000258781 SLC5A7Q9GZV3 580 aa23.27■■□□□ 1.32
CCM2-201ENST00000258781 SEBOXQ9HB31 216 aaPredicted RBP23.27■■□□□ 1.32
CCM2-201ENST00000258781 SRRM5B3KS81 715 aa23.26■■□□□ 1.31
CCM2-201ENST00000258781 MPPED1O15442 326 aa23.26■■□□□ 1.31
CCM2-201ENST00000258781 THBDP07204 575 aa23.26■■□□□ 1.31
CCM2-201ENST00000258781 SLC35E4Q6ICL7 350 aa23.26■■□□□ 1.31
CCM2-201ENST00000258781 ACOT7LQ6ZUV0 252 aa23.26■■□□□ 1.31
CCM2-201ENST00000258781 MRPL24Q96A35 216 aaKnown RBP23.26■■□□□ 1.31
CCM2-201ENST00000258781 KIRREL1Q96J84 757 aa23.26■■□□□ 1.31
CCM2-201ENST00000258781 OR2V2Q96R30 315 aa23.26■■□□□ 1.31
CCM2-201ENST00000258781 COQ3Q9NZJ6 369 aa23.26■■□□□ 1.31
CCM2-201ENST00000258781 OR2W1Q9Y3N9 320 aa23.26■■□□□ 1.31
CCM2-201ENST00000258781 IGKV1D-13A0A0B4J2D9 117 aa23.26■■□□□ 1.31
CCM2-201ENST00000258781 CFDP00746 253 aaPredicted RBP23.26■■□□□ 1.31
CCM2-201ENST00000258781 IGKV1-13P0DP09 117 aa23.26■■□□□ 1.31
CCM2-201ENST00000258781 ASCL1P50553 236 aa23.26■■□□□ 1.31
CCM2-201ENST00000258781 GALNT11Q8NCW6 608 aa23.26■■□□□ 1.31
CCM2-201ENST00000258781 S100A1P23297 94 aa23.25■■□□□ 1.31
CCM2-201ENST00000258781 SP6Q3SY56 376 aa23.25■■□□□ 1.31
CCM2-201ENST00000258781 LGI3Q8N145 548 aa23.25■■□□□ 1.31
CCM2-201ENST00000258781 GLYATL2Q8WU03 294 aa23.25■■□□□ 1.31
CCM2-201ENST00000258781 RNF222A6NCQ9 220 aa23.24■■□□□ 1.31
CCM2-201ENST00000258781 NKX2-6A6NCS4 301 aa23.24■■□□□ 1.31
CCM2-201ENST00000258781 LYL1P12980 280 aa23.24■■□□□ 1.31
CCM2-201ENST00000258781 SRPXP78539 464 aa23.24■■□□□ 1.31
CCM2-201ENST00000258781 GGNBP1Q5YKI7 109 aa23.24■■□□□ 1.31
CCM2-201ENST00000258781 MSI2Q96DH6 328 aaKnown RBP23.24■■□□□ 1.31
CCM2-201ENST00000258781 RNF126Q9BV68 326 aa23.24■■□□□ 1.31
CCM2-201ENST00000258781 FBXO9Q9UK97 447 aaPredicted RBP23.24■■□□□ 1.31
CCM2-201ENST00000258781 PET100P0DJ07 73 aa23.24■■□□□ 1.31
CCM2-201ENST00000258781 GATA4P43694 442 aa23.24■■□□□ 1.31
CCM2-201ENST00000258781 AP2S1P53680 142 aaPredicted RBP23.24■■□□□ 1.31
CCM2-201ENST00000258781 PRSS54Q6PEW0 395 aa23.24■■□□□ 1.31
CCM2-201ENST00000258781 ZNF818PQ6ZRF7 136 aa23.24■■□□□ 1.31
CCM2-201ENST00000258781 INO80EQ8NBZ0 244 aaPredicted RBP23.24■■□□□ 1.31
CCM2-201ENST00000258781 C18orf12Q96KH6 178 aa23.24■■□□□ 1.31
CCM2-201ENST00000258781 C3orf85A0A1B0GTC6 90 aa23.23■■□□□ 1.31
CCM2-201ENST00000258781 DPRXA6NFQ7 191 aa23.23■■□□□ 1.31
CCM2-201ENST00000258781 PHF1O43189 567 aaPredicted RBP23.23■■□□□ 1.31
CCM2-201ENST00000258781 SPRY3O43610 288 aa23.23■■□□□ 1.31
CCM2-201ENST00000258781 IAH1Q2TAA2 248 aaPredicted RBP23.23■■□□□ 1.31
CCM2-201ENST00000258781 SLC51BQ86UW2 128 aa23.23■■□□□ 1.31
CCM2-201ENST00000258781 LILRB1Q8NHL6 650 aaPredicted RBP23.23■■□□□ 1.31
CCM2-201ENST00000258781 TRAV39A0A0B4J263 110 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 EGR1P18146 543 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 OR3A1P47881 315 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 HOXA4Q00056 320 aaPredicted RBP23.22■■□□□ 1.31
CCM2-201ENST00000258781 COL10A1Q03692 680 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 TBC1D26Q86UD7 250 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 OR8H3Q8N146 312 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 IL1F10Q8WWZ1 152 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 TAF9BQ9HBM6 251 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 KCNIP1Q9NZI2 227 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 ERRFI1Q9UJM3 462 aaPredicted RBP23.22■■□□□ 1.31
CCM2-201ENST00000258781 SPTBN1Q01082 2364 aaKnown RBP23.22■■□□□ 1.31
CCM2-201ENST00000258781 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP23.22■■□□□ 1.31
CCM2-201ENST00000258781 ABCD4O14678 606 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 PAX5Q02548 391 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 FBXL19-AS1Q494R0 122 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 MOGAT3Q86VF5 341 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms