RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 BTBD17A6NE02 478 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 NXPH3O95157 252 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 ARR3P36575 388 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 SP5Q6BEB4 398 aaPredicted RBP13.01□□□□□ -0.33
DDX56-201ENST00000258772 TMEM105Q8N8V8 129 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 OR5P3Q8WZ94 311 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 GNPNAT1Q96EK6 184 aaPredicted RBP13.01□□□□□ -0.33
DDX56-201ENST00000258772 ZNF488Q96MN9 340 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 ZPBPQ9BS86 351 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 PLK3Q9H4B4 646 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 TAAR3PQ9P1P4 343 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 RNF115Q9Y4L5 304 aa13.01□□□□□ -0.33
DDX56-201ENST00000258772 PUS1Q9Y606 427 aaKnown RBP eCLIP13.01□□□□□ -0.33
DDX56-201ENST00000258772 KMT2EQ8IZD2 1858 aa13□□□□□ -0.33
DDX56-201ENST00000258772 WRBO00258 174 aa13□□□□□ -0.33
DDX56-201ENST00000258772 SLC33A1O00400 549 aaPredicted RBP13□□□□□ -0.33
DDX56-201ENST00000258772 HS3ST1O14792 307 aa13□□□□□ -0.33
DDX56-201ENST00000258772 ZNF14P17017 642 aaPredicted RBP13□□□□□ -0.33
DDX56-201ENST00000258772 EPHA1P21709 976 aa13□□□□□ -0.33
DDX56-201ENST00000258772 F2RP25116 425 aa13□□□□□ -0.33
DDX56-201ENST00000258772 ITGA3P26006 1051 aa13□□□□□ -0.33
DDX56-201ENST00000258772 MAGEA5P43359 124 aa13□□□□□ -0.33
DDX56-201ENST00000258772 PAX9P55771 341 aa13□□□□□ -0.33
DDX56-201ENST00000258772 LINC00596Q86U02 117 aa13□□□□□ -0.33
DDX56-201ENST00000258772 RDH5Q92781 318 aa13□□□□□ -0.33
DDX56-201ENST00000258772 APH1AQ96BI3 265 aa13□□□□□ -0.33
DDX56-201ENST00000258772 SPRY4Q9C004 299 aa13□□□□□ -0.33
DDX56-201ENST00000258772 KIAA1456Q9P272 454 aa13□□□□□ -0.33
DDX56-201ENST00000258772 TRBV6-6A0A0A6YYG2 114 aa13□□□□□ -0.33
DDX56-201ENST00000258772 FAM166BA8MTA8 275 aa13□□□□□ -0.33
DDX56-201ENST00000258772 CBR1P16152 277 aa13□□□□□ -0.33
DDX56-201ENST00000258772 S100A12P80511 92 aa13□□□□□ -0.33
DDX56-201ENST00000258772 ZNF154Q13106 437 aa13□□□□□ -0.33
DDX56-201ENST00000258772 HIKESHIQ53FT3 197 aa13□□□□□ -0.33
DDX56-201ENST00000258772 ABHD17BQ5VST6 288 aa13□□□□□ -0.33
DDX56-201ENST00000258772 ZNF324BQ6AW86 544 aaPredicted RBP13□□□□□ -0.33
DDX56-201ENST00000258772 ADAM5Q6NVV9 412 aa13□□□□□ -0.33
DDX56-201ENST00000258772 MALSU1Q96EH3 234 aa13□□□□□ -0.33
DDX56-201ENST00000258772 OR2W1Q9Y3N9 320 aa13□□□□□ -0.33
DDX56-201ENST00000258772 FAM186AA6NE01 2351 aa12.99□□□□□ -0.33
DDX56-201ENST00000258772 TRAV24A0A0B4J272 114 aa12.99□□□□□ -0.33
DDX56-201ENST00000258772 LILRA1O75019 489 aa12.99□□□□□ -0.33
DDX56-201ENST00000258772 CEACAM1P13688 526 aa12.99□□□□□ -0.33
DDX56-201ENST00000258772 HOXB1P14653 301 aaPredicted RBP12.99□□□□□ -0.33
DDX56-201ENST00000258772 SPINK2P20155 84 aa12.99□□□□□ -0.33
DDX56-201ENST00000258772 B2MP61769 119 aa12.99□□□□□ -0.33
DDX56-201ENST00000258772 RUNX1Q01196 453 aa12.99□□□□□ -0.33
DDX56-201ENST00000258772 PLP2Q04941 152 aa12.99□□□□□ -0.33
DDX56-201ENST00000258772 TTTY12Q9BZ98 90 aa12.99□□□□□ -0.33
DDX56-201ENST00000258772 OPA3Q9H6K4 179 aa12.99□□□□□ -0.33
DDX56-201ENST00000258772 TNRC18O15417 2968 aaPredicted RBP12.99□□□□□ -0.33
DDX56-201ENST00000258772 ARHGAP21Q5T5U3 1957 aa12.99□□□□□ -0.33
DDX56-201ENST00000258772 A0A0G2JRQ6 117 aa12.99□□□□□ -0.33
DDX56-201ENST00000258772 S100A8P05109 93 aa12.99□□□□□ -0.33
DDX56-201ENST00000258772 MAS1LP35410 378 aa12.99□□□□□ -0.33
DDX56-201ENST00000258772 RPS23P62266 143 aaKnown RBP12.99□□□□□ -0.33
DDX56-201ENST00000258772 IL24Q13007 206 aa12.99□□□□□ -0.33
DDX56-201ENST00000258772 RBMS3Q6XE24 437 aaKnown RBP12.99□□□□□ -0.33
DDX56-201ENST00000258772 OR10J5Q8NHC4 309 aa12.99□□□□□ -0.33
DDX56-201ENST00000258772 GPR146Q96CH1 333 aa12.99□□□□□ -0.33
DDX56-201ENST00000258772 CDX2Q99626 313 aaPredicted RBP12.99□□□□□ -0.33
DDX56-201ENST00000258772 UNKLQ9H9P5 680 aaKnown RBP12.99□□□□□ -0.33
DDX56-201ENST00000258772 METTL1Q9UBP6 276 aaKnown RBP12.99□□□□□ -0.33
DDX56-201ENST00000258772 MED13Q9UHV7 2174 aa12.98□□□□□ -0.33
DDX56-201ENST00000258772 ANKRD30BLA7E2S9 258 aa12.98□□□□□ -0.33
DDX56-201ENST00000258772 C3orf80F5H4A9 247 aa12.98□□□□□ -0.33
DDX56-201ENST00000258772 SRP19P09132 144 aaKnown RBP12.98□□□□□ -0.33
DDX56-201ENST00000258772 S100GP29377 79 aa12.98□□□□□ -0.33
DDX56-201ENST00000258772 FABP9Q0Z7S8 132 aa12.98□□□□□ -0.33
DDX56-201ENST00000258772 RNPS1Q15287 305 aaKnown RBP12.98□□□□□ -0.33
DDX56-201ENST00000258772 OR1C1Q15619 314 aa12.98□□□□□ -0.33
DDX56-201ENST00000258772 HAGHQ16775 308 aa12.98□□□□□ -0.33
DDX56-201ENST00000258772 AKR1C8PQ5T2L2 129 aa12.98□□□□□ -0.33
DDX56-201ENST00000258772 ZNF880Q6PDB4 577 aa12.98□□□□□ -0.33
DDX56-201ENST00000258772 ZNF573Q86YE8 665 aa12.98□□□□□ -0.33
DDX56-201ENST00000258772 H1FOOQ8IZA3 346 aaPredicted RBP12.98□□□□□ -0.33
DDX56-201ENST00000258772 FAM58AQ8N1B3 248 aa12.98□□□□□ -0.33
DDX56-201ENST00000258772 ATP5SQ99766 215 aa12.98□□□□□ -0.33
DDX56-201ENST00000258772 STRADBQ9C0K7 418 aa12.98□□□□□ -0.33
DDX56-201ENST00000258772 ERRFI1Q9UJM3 462 aaPredicted RBP12.98□□□□□ -0.33
DDX56-201ENST00000258772 MPC1Q9Y5U8 109 aa12.98□□□□□ -0.33
DDX56-201ENST00000258772 C9orf172C9J069 976 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 OR2C1O95371 312 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 IGHV2-5P01817 119 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 WNT5AP41221 380 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 GNG3P63215 75 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 OR8G1Q15617 311 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 NUFIP2Q7Z417 695 aaKnown RBP12.97□□□□□ -0.33
DDX56-201ENST00000258772 C17orf78Q8N4C9 275 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 TMEM251Q8N6I4 163 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 DLL3Q9NYJ7 618 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 PLA2G3Q9NZ20 509 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 LIPGQ9Y5X9 500 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 ZDBF2Q9HCK1 2354 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 MED12LQ86YW9 2145 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 A0A1B0GU03 582 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 C19orf67A6NJJ6 358 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 OR5B21A6NL26 309 aa12.97□□□□□ -0.33
DDX56-201ENST00000258772 KIAA1324LA8MWY0 1029 aaPredicted RBP12.97□□□□□ -0.33
DDX56-201ENST00000258772 JMJD7P0C870 316 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms