RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 LGALS8O00214 317 aa12.49□□□□□ -0.41
MBD4-201ENST00000249910 NXPH2O95156 264 aa12.49□□□□□ -0.41
MBD4-201ENST00000249910 OR2H2O95918 312 aa12.49□□□□□ -0.41
MBD4-201ENST00000249910 PMELP40967 661 aa12.49□□□□□ -0.41
MBD4-201ENST00000249910 PRSS54Q6PEW0 395 aa12.49□□□□□ -0.41
MBD4-201ENST00000249910 GAPTQ8N292 157 aa12.49□□□□□ -0.41
MBD4-201ENST00000249910 EDARADDQ8WWZ3 215 aa12.49□□□□□ -0.41
MBD4-201ENST00000249910 MSI2Q96DH6 328 aaKnown RBP12.49□□□□□ -0.41
MBD4-201ENST00000249910 ABHD17AQ96GS6 310 aa12.49□□□□□ -0.41
MBD4-201ENST00000249910 KIRREL1Q96J84 757 aa12.49□□□□□ -0.41
MBD4-201ENST00000249910 PKIBQ9C010 78 aa12.49□□□□□ -0.41
MBD4-201ENST00000249910 PLK3Q9H4B4 646 aa12.49□□□□□ -0.41
MBD4-201ENST00000249910 OR2S2Q9NQN1 319 aa12.49□□□□□ -0.41
MBD4-201ENST00000249910 MLXQ9UH92 298 aa12.49□□□□□ -0.41
MBD4-201ENST00000249910 LSM5Q9Y4Y9 91 aaKnown RBP12.49□□□□□ -0.41
MBD4-201ENST00000249910 IGHV1-18A0A0C4DH31 117 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 hCG_1807616A0A1W2PRN6 198 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 LRP5LA4QPB2 252 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 IQCF6A8MYZ5 107 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 DNASE2O00115 360 aaPredicted RBP12.48□□□□□ -0.41
MBD4-201ENST00000249910 HSD17B6O14756 317 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 SPCS3P61009 180 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 Q6P435 159 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 ZNF474Q6S9Z5 364 aaPredicted RBP12.48□□□□□ -0.41
MBD4-201ENST00000249910 LDLRAD3Q86YD5 345 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 PIK3IP1Q96FE7 263 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 GALNT14Q96FL9 552 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 REG4Q9BYZ8 158 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 ATRXP46100 2492 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 MBD3L4A6NDZ8 208 aaPredicted RBP12.48□□□□□ -0.41
MBD4-201ENST00000249910 MBD3L3A6NE82 208 aaPredicted RBP12.48□□□□□ -0.41
MBD4-201ENST00000249910 MBD3L5A6NJ08 208 aaPredicted RBP12.48□□□□□ -0.41
MBD4-201ENST00000249910 TRDCB7Z8K6 153 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 IFNA21P01568 189 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 EIF2S3P41091 472 aaKnown RBP12.48□□□□□ -0.41
MBD4-201ENST00000249910 UBA52P62987 128 aaKnown RBP12.48□□□□□ -0.41
MBD4-201ENST00000249910 PAN3Q58A45 887 aaKnown RBP12.48□□□□□ -0.41
MBD4-201ENST00000249910 PRAMEF6Q5VXH4 476 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 PCSK4Q6UW60 755 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 Q6ZR03 302 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 BHLHA15Q7RTS1 189 aaPredicted RBP12.48□□□□□ -0.41
MBD4-201ENST00000249910 PDZD9Q8IXQ8 264 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 OR52M1Q8NGK5 317 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 MBD3L2Q8NHZ7 208 aaPredicted RBP12.48□□□□□ -0.41
MBD4-201ENST00000249910 SYT3Q9BQG1 590 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 RSRP1Q9BUV0 290 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 CCL28Q9NRJ3 127 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 TMEM100Q9NV29 134 aa12.48□□□□□ -0.41
MBD4-201ENST00000249910 OR5H1A6NKK0 313 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 A6NLC8 198 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 J3QW42 95 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 MPPED1O15442 326 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 TIMM8AO60220 97 aaPredicted RBP12.47□□□□□ -0.41
MBD4-201ENST00000249910 ACAA1P09110 424 aaPredicted RBP12.47□□□□□ -0.41
MBD4-201ENST00000249910 ERVK11-1P61568 191 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 PLPPR1Q8TBJ4 325 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 NRIP2Q9BQI9 281 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 SPACA1Q9HBV2 294 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 NDRG3Q9UGV2 375 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 DUSP13Q9UII6 198 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 PURGQ9UJV8 347 aaKnown RBP12.47□□□□□ -0.41
MBD4-201ENST00000249910 CHD8Q9HCK8 2581 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 IGHV2OR16-5A0A0B4J2B6 119 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 H2AFB1P0C5Y9 115 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 GPX4P36969 197 aaPredicted RBP12.47□□□□□ -0.41
MBD4-201ENST00000249910 ZNF83P51522 516 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 LIAT1Q6ZQX7 453 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 C22orf34Q6ZV56 151 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 TBC1D26Q86UD7 250 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 DMRTC2Q8IXT2 367 aaPredicted RBP12.47□□□□□ -0.41
MBD4-201ENST00000249910 SLC35G3Q8N808 338 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 S100PBPQ96BU1 408 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 POM121Q96HA1 1249 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 CNTNAP3BQ96NU0 1288 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 CNTNAP3Q9BZ76 1288 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 CYTL1Q9NRR1 136 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 OR1A1Q9P1Q5 309 aa12.47□□□□□ -0.41
MBD4-201ENST00000249910 PKDREJQ9NTG1 2253 aa12.46□□□□□ -0.41
MBD4-201ENST00000249910 KIR2DS1A0A191URI9 304 aa12.46□□□□□ -0.41
MBD4-201ENST00000249910 C3orf85A0A1B0GTC6 90 aa12.46□□□□□ -0.41
MBD4-201ENST00000249910 ZNF729A6NN14 1252 aaPredicted RBP12.46□□□□□ -0.41
MBD4-201ENST00000249910 SLC33A1O00400 549 aaPredicted RBP12.46□□□□□ -0.41
MBD4-201ENST00000249910 PSPNO60542 156 aa12.46□□□□□ -0.41
MBD4-201ENST00000249910 S100A9P06702 114 aaKnown RBP12.46□□□□□ -0.41
MBD4-201ENST00000249910 PGA5P0DJD9 388 aa12.46□□□□□ -0.41
MBD4-201ENST00000249910 KIR2DS4P43632 304 aa12.46□□□□□ -0.41
MBD4-201ENST00000249910 KCNJ3P48549 501 aa12.46□□□□□ -0.41
MBD4-201ENST00000249910 UCP3P55916 312 aa12.46□□□□□ -0.41
MBD4-201ENST00000249910 SNTB1Q13884 538 aaKnown RBP12.46□□□□□ -0.41
MBD4-201ENST00000249910 KIR2DS1Q14954 304 aa12.46□□□□□ -0.41
MBD4-201ENST00000249910 MSMPQ1L6U9 139 aa12.46□□□□□ -0.41
MBD4-201ENST00000249910 TMEM268Q5VZI3 342 aa12.46□□□□□ -0.41
MBD4-201ENST00000249910 LRP11Q86VZ4 500 aa12.46□□□□□ -0.41
MBD4-201ENST00000249910 C1orf162Q8NEQ5 155 aaPredicted RBP12.46□□□□□ -0.41
MBD4-201ENST00000249910 OR8G5Q8NG78 346 aa12.46□□□□□ -0.41
MBD4-201ENST00000249910 SCNM1Q9BWG6 230 aa12.46□□□□□ -0.41
MBD4-201ENST00000249910 SLC5A7Q9GZV3 580 aa12.46□□□□□ -0.41
MBD4-201ENST00000249910 NIT2Q9NQR4 276 aa12.46□□□□□ -0.41
MBD4-201ENST00000249910 MIOXQ9UGB7 285 aa12.46□□□□□ -0.41
MBD4-201ENST00000249910 POLDIP2Q9Y2S7 368 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms