RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 MUCL1Q96DR8 90 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 DNTTIP1Q9H147 329 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 SDHAF2Q9NX18 166 aa19.35■□□□□ 0.69
HOXD9-201ENST00000249499 LOC400499M0QZD8 3231 aa19.34■□□□□ 0.69
HOXD9-201ENST00000249499 IGKV1D-13A0A0B4J2D9 117 aa19.34■□□□□ 0.69
HOXD9-201ENST00000249499 MSGN1A6NI15 193 aa19.34■□□□□ 0.69
HOXD9-201ENST00000249499 IGKV1-13P0DP09 117 aa19.34■□□□□ 0.69
HOXD9-201ENST00000249499 FABP6P51161 128 aa19.34■□□□□ 0.69
HOXD9-201ENST00000249499 SPACA3Q8IXA5 215 aa19.34■□□□□ 0.69
HOXD9-201ENST00000249499 BAP18Q8IXM2 172 aa19.34■□□□□ 0.69
HOXD9-201ENST00000249499 PLPPR1Q8TBJ4 325 aa19.34■□□□□ 0.69
HOXD9-201ENST00000249499 IL22RA2Q969J5 263 aa19.34■□□□□ 0.69
HOXD9-201ENST00000249499 S100PBPQ96BU1 408 aa19.34■□□□□ 0.69
HOXD9-201ENST00000249499 CXorf58Q96LI9 332 aa19.34■□□□□ 0.69
HOXD9-201ENST00000249499 PIGMQ9H3S5 423 aa19.34■□□□□ 0.69
HOXD9-201ENST00000249499 E5RGE8 158 aa19.33■□□□□ 0.69
HOXD9-201ENST00000249499 SHOXO15266 292 aa19.33■□□□□ 0.69
HOXD9-201ENST00000249499 HKR1P10072 659 aa19.33■□□□□ 0.69
HOXD9-201ENST00000249499 HSD17B13Q7Z5P4 300 aaPredicted RBP19.33■□□□□ 0.69
HOXD9-201ENST00000249499 RPRMLQ8N4K4 120 aa19.33■□□□□ 0.69
HOXD9-201ENST00000249499 BVESQ8NE79 360 aa19.33■□□□□ 0.69
HOXD9-201ENST00000249499 LILRB1Q8NHL6 650 aaPredicted RBP19.33■□□□□ 0.69
HOXD9-201ENST00000249499 SPIN2AQ99865 258 aa19.33■□□□□ 0.69
HOXD9-201ENST00000249499 SPIN2BQ9BPZ2 258 aa19.33■□□□□ 0.69
HOXD9-201ENST00000249499 USB1Q9BQ65 265 aaKnown RBP19.33■□□□□ 0.69
HOXD9-201ENST00000249499 NSG2Q9Y328 171 aa19.33■□□□□ 0.69
HOXD9-201ENST00000249499 UBE2J1Q9Y385 318 aaPredicted RBP19.33■□□□□ 0.69
HOXD9-201ENST00000249499 SHANK1Q9Y566 2161 aa19.33■□□□□ 0.68
HOXD9-201ENST00000249499 GTF3C1Q12789 2109 aa19.33■□□□□ 0.68
HOXD9-201ENST00000249499 IFNL4K9M1U5 179 aa19.33■□□□□ 0.68
HOXD9-201ENST00000249499 PTBP3O95758 552 aaKnown RBP19.33■□□□□ 0.68
HOXD9-201ENST00000249499 GLI4P10075 376 aa19.33■□□□□ 0.68
HOXD9-201ENST00000249499 ZNF250P15622 560 aa19.33■□□□□ 0.68
HOXD9-201ENST00000249499 UCP1P25874 307 aa19.33■□□□□ 0.68
HOXD9-201ENST00000249499 TDGF1P3P51864 188 aa19.33■□□□□ 0.68
HOXD9-201ENST00000249499 HMGN3Q15651 99 aa19.33■□□□□ 0.68
HOXD9-201ENST00000249499 WDR82Q6UXN9 313 aa19.33■□□□□ 0.68
HOXD9-201ENST00000249499 LHFPL5Q8TAF8 219 aa19.33■□□□□ 0.68
HOXD9-201ENST00000249499 TRAPPC2LQ9UL33 140 aa19.33■□□□□ 0.68
HOXD9-201ENST00000249499 H0Y980 276 aa19.32■□□□□ 0.68
HOXD9-201ENST00000249499 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.32■□□□□ 0.68
HOXD9-201ENST00000249499 K7EPK0 472 aa19.32■□□□□ 0.68
HOXD9-201ENST00000249499 CRYAAP02489 173 aa19.32■□□□□ 0.68
HOXD9-201ENST00000249499 CD200P41217 278 aa19.32■□□□□ 0.68
HOXD9-201ENST00000249499 ACP7Q6ZNF0 438 aa19.32■□□□□ 0.68
HOXD9-201ENST00000249499 FAM71E2Q8N5Q1 922 aa19.32■□□□□ 0.68
HOXD9-201ENST00000249499 SLC35G3Q8N808 338 aa19.32■□□□□ 0.68
HOXD9-201ENST00000249499 TP53TG5Q9Y2B4 290 aa19.32■□□□□ 0.68
HOXD9-201ENST00000249499 PRRC2CQ9Y520 2896 aaKnown RBP19.32■□□□□ 0.68
HOXD9-201ENST00000249499 DSPP15924 2871 aaKnown RBP19.32■□□□□ 0.68
HOXD9-201ENST00000249499 TMEM30CPA0ZSE6 113 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 PRRG2O14669 202 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 KCNAB3O43448 404 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 MBPP02686 304 aaPredicted RBP19.31■□□□□ 0.68
HOXD9-201ENST00000249499 RPL12P30050 165 aaKnown RBP19.31■□□□□ 0.68
HOXD9-201ENST00000249499 GLRXP35754 106 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 TMEM268Q5VZI3 342 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 SLC35E4Q6ICL7 350 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 ABHD14BQ96IU4 210 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 AKR1E2Q96JD6 320 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 SEBOXQ9HB31 216 aaPredicted RBP19.31■□□□□ 0.68
HOXD9-201ENST00000249499 CCL28Q9NRJ3 127 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 LUZP4Q9P127 313 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 INTS1Q8N201 2190 aaKnown RBP19.31■□□□□ 0.68
HOXD9-201ENST00000249499 USP24Q9UPU5 2620 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 A6NLC8 198 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 A8MXE2 369 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 K7ENP7 123 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 IGHV3-13P01766 116 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 SMIM21Q3B7S5 101 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 ZNF695Q8IW36 515 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 RELL2Q8NC24 303 aaPredicted RBP19.31■□□□□ 0.68
HOXD9-201ENST00000249499 OR5D13Q8NGL4 314 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 OR10Z1Q8NGY1 313 aa19.31■□□□□ 0.68
HOXD9-201ENST00000249499 CLEC18AA5D8T8 446 aa19.3■□□□□ 0.68
HOXD9-201ENST00000249499 ST8SIA3O43173 380 aa19.3■□□□□ 0.68
HOXD9-201ENST00000249499 GAPDHP04406 335 aaKnown RBP19.3■□□□□ 0.68
HOXD9-201ENST00000249499 ZNF83P51522 516 aa19.3■□□□□ 0.68
HOXD9-201ENST00000249499 RPS23P62266 143 aaKnown RBP19.3■□□□□ 0.68
HOXD9-201ENST00000249499 NKX6-1P78426 367 aaPredicted RBP19.3■□□□□ 0.68
HOXD9-201ENST00000249499 MEX3BQ6ZN04 569 aaKnown RBP19.3■□□□□ 0.68
HOXD9-201ENST00000249499 C5orf24Q7Z6I8 188 aa19.3■□□□□ 0.68
HOXD9-201ENST00000249499 CLEC18CQ8NCF0 446 aa19.3■□□□□ 0.68
HOXD9-201ENST00000249499 OR10V1Q8NGI7 309 aa19.3■□□□□ 0.68
HOXD9-201ENST00000249499 OR4D5Q8NGN0 318 aa19.3■□□□□ 0.68
HOXD9-201ENST00000249499 DMRTA2Q96SC8 542 aa19.3■□□□□ 0.68
HOXD9-201ENST00000249499 M0R1B8 84 aa19.29■□□□□ 0.68
HOXD9-201ENST00000249499 FGF2P09038 288 aa19.29■□□□□ 0.68
HOXD9-201ENST00000249499 CFHR2P36980 270 aa19.29■□□□□ 0.68
HOXD9-201ENST00000249499 PAX5Q02548 391 aa19.29■□□□□ 0.68
HOXD9-201ENST00000249499 TBR1Q16650 682 aa19.29■□□□□ 0.68
HOXD9-201ENST00000249499 GPR157Q5UAW9 335 aa19.29■□□□□ 0.68
HOXD9-201ENST00000249499 EIF5AL1Q6IS14 154 aaKnown RBP19.29■□□□□ 0.68
HOXD9-201ENST00000249499 MRGPRGQ86SM5 289 aa19.29■□□□□ 0.68
HOXD9-201ENST00000249499 FAM90A1Q86YD7 464 aa19.29■□□□□ 0.68
HOXD9-201ENST00000249499 SELENOHQ8IZQ5 122 aaKnown RBP19.29■□□□□ 0.68
HOXD9-201ENST00000249499 MSL2Q9HCI7 577 aa19.29■□□□□ 0.68
HOXD9-201ENST00000249499 LSM5Q9Y4Y9 91 aaKnown RBP19.29■□□□□ 0.68
HOXD9-201ENST00000249499 A8MXK9 166 aa19.28■□□□□ 0.68
HOXD9-201ENST00000249499 C3orf80F5H4A9 247 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms