RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 CACNA1DQ01668 2161 aa21.77■■□□□ 1.08
RAB40C-201ENST00000248139 SLC34A2O95436 690 aa21.77■■□□□ 1.08
RAB40C-201ENST00000248139 UCP2P55851 309 aa21.77■■□□□ 1.08
RAB40C-201ENST00000248139 HAGHQ16775 308 aa21.77■■□□□ 1.08
RAB40C-201ENST00000248139 MCEMP1Q8IX19 187 aa21.77■■□□□ 1.08
RAB40C-201ENST00000248139 SFT2D1Q8WV19 159 aa21.77■■□□□ 1.08
RAB40C-201ENST00000248139 PLEKHF2Q9H8W4 249 aa21.77■■□□□ 1.08
RAB40C-201ENST00000248139 KCNJ16Q9NPI9 418 aa21.77■■□□□ 1.08
RAB40C-201ENST00000248139 LYRM2Q9NU23 88 aaPredicted RBP21.77■■□□□ 1.08
RAB40C-201ENST00000248139 PMELP40967 661 aa21.76■■□□□ 1.07
RAB40C-201ENST00000248139 PLP2Q04941 152 aa21.76■■□□□ 1.07
RAB40C-201ENST00000248139 OR5A2Q8NGI9 324 aa21.76■■□□□ 1.07
RAB40C-201ENST00000248139 COA4Q9NYJ1 87 aa21.76■■□□□ 1.07
RAB40C-201ENST00000248139 PSG2P11465 335 aa21.76■■□□□ 1.07
RAB40C-201ENST00000248139 FAM185AQ8N0U4 392 aa21.76■■□□□ 1.07
RAB40C-201ENST00000248139 TAAR3PQ9P1P4 343 aa21.76■■□□□ 1.07
RAB40C-201ENST00000248139 IL18BPO95998 194 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 UCP1P25874 307 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 MEOX1P50221 254 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 SRPXP78539 464 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 ARHGAP21Q5T5U3 1957 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 FAM90A10PA6NDY2 464 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 FAM90A18PA6NE21 464 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 FAM90A16PA6NEW6 464 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 FAM90A20PA6NIJ5 464 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 FAM90A8PA6NJQ4 464 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 FAM90A7PA6NKC0 464 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 FAM90A22PA8MWA6 464 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 FAM90A12PA8MX19 464 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 FAM90A5PA8MXJ8 464 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 FAM90A23PA8MXZ1 464 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 CELA3BP08861 270 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 FAM90A15PP0C7V4 464 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 FAM90A13PP0C7W8 464 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 FAM90A14PP0C7W9 464 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 FAM90A24PP0C7X0 464 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 LMO1P25800 156 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 MPV17LQ2QL34 196 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 SLC35B3Q9H1N7 401 aa21.75■■□□□ 1.07
RAB40C-201ENST00000248139 STRAPQ9Y3F4 350 aaKnown RBP21.75■■□□□ 1.07
RAB40C-201ENST00000248139 KIR2DS1A0A191URI9 304 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 ANKRD30BLA7E2S9 258 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 WRBO00258 174 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 MT-CO3P00414 261 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 VDAC1P21796 283 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 KIR2DS4P43632 304 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 ERVS71-1P61550 626 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 KIR2DS1Q14954 304 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 Q6ZRM9 215 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 Q6ZS49 121 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.74■■□□□ 1.07
RAB40C-201ENST00000248139 CMTM1Q8IZ96 169 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 FAM58AQ8N1B3 248 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 IL22RA1Q8N6P7 574 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 DLL3Q9NYJ7 618 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 SS18L1O75177 396 aaPredicted RBP21.74■■□□□ 1.07
RAB40C-201ENST00000248139 PAX9P55771 341 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 TMEM267Q0VDI3 215 aaPredicted RBP21.74■■□□□ 1.07
RAB40C-201ENST00000248139 SPSB3Q6PJ21 355 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 MDP1Q86V88 176 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 C15orf54Q8N8G6 183 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 ATPIF1Q9UII2 106 aa21.74■■□□□ 1.07
RAB40C-201ENST00000248139 TNRC6AQ8NDV7 1962 aaKnown RBP21.74■■□□□ 1.07
RAB40C-201ENST00000248139 SIRPB1O00241 398 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 APLNRP35414 380 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 ID3Q02535 119 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 SAXO1Q8IYX7 474 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 OR10J5Q8NHC4 309 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 SPIN2AQ99865 258 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 SPIN2BQ9BPZ2 258 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 PPP1R3CQ9UQK1 317 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 PITX3O75364 302 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 PLA2G5P39877 138 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 CLN3Q13286 438 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 ZNF266Q14584 549 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 ADAM5Q6NVV9 412 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 EIF3GO75821 320 aaKnown RBP eCLIP21.73■■□□□ 1.07
RAB40C-201ENST00000248139 ZNF16P17020 682 aaPredicted RBP21.73■■□□□ 1.07
RAB40C-201ENST00000248139 PTAFRP25105 342 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 SULT1A1P50225 295 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 RAB5CP51148 216 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 OR2B8PP59922 312 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 RND3P61587 244 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 ALKBH6Q3KRA9 238 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 ZNF324BQ6AW86 544 aaPredicted RBP21.73■■□□□ 1.07
RAB40C-201ENST00000248139 DHRS13Q6UX07 377 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 RBMS3Q6XE24 437 aaKnown RBP21.73■■□□□ 1.07
RAB40C-201ENST00000248139 GPR146Q96CH1 333 aa21.73■■□□□ 1.07
RAB40C-201ENST00000248139 F2RP25116 425 aa21.72■■□□□ 1.07
RAB40C-201ENST00000248139 ARR3P36575 388 aa21.72■■□□□ 1.07
RAB40C-201ENST00000248139 RAB5BP61020 215 aa21.72■■□□□ 1.07
RAB40C-201ENST00000248139 LINC01387J3KSC0 135 aa21.72■■□□□ 1.07
RAB40C-201ENST00000248139 RNFT1Q5M7Z0 435 aa21.72■■□□□ 1.07
RAB40C-201ENST00000248139 TMPRSS7Q7RTY8 843 aa21.72■■□□□ 1.07
RAB40C-201ENST00000248139 KMT2EQ8IZD2 1858 aa21.72■■□□□ 1.07
RAB40C-201ENST00000248139 COMMD1Q8N668 190 aa21.72■■□□□ 1.07
RAB40C-201ENST00000248139 ZPBPQ9BS86 351 aa21.72■■□□□ 1.07
RAB40C-201ENST00000248139 RNF122Q9H9V4 155 aa21.72■■□□□ 1.07
RAB40C-201ENST00000248139 GNG3P63215 75 aa21.71■■□□□ 1.07
RAB40C-201ENST00000248139 FAM53AQ6NSI3 398 aaPredicted RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms