RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 RGP1Q92546 391 aaPredicted RBP13.74□□□□□ -0.21
SIN3B-201ENST00000248054 LINC00470Q9BZP3 86 aa13.74□□□□□ -0.21
SIN3B-201ENST00000248054 METTL1Q9UBP6 276 aaKnown RBP13.74□□□□□ -0.21
SIN3B-201ENST00000248054 MRPS18BQ9Y676 258 aaKnown RBP13.74□□□□□ -0.21
SIN3B-201ENST00000248054 H3BMH7 237 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 KCNAB3O43448 404 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 GOLGB1Q14789 3259 aaKnown RBP13.73□□□□□ -0.21
SIN3B-201ENST00000248054 B4DEV8 164 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 CHEK1O14757 476 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 OR10X1Q8NGY0 326 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 ZDHHC11Q9H8X9 412 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 LPAR3Q9UBY5 353 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 FBXL17Q9UF56 701 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 V9GYS6 101 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 IGHV3-64DA0A0J9YX35 117 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 A0A1W2PR80 420 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 TRDCB7Z8K6 153 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 NDUFB3O43676 98 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 HOGA1Q86XE5 327 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 OR10V1Q8NGI7 309 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 KCNK15Q9H427 330 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 SLC7A10Q9NS82 523 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 ELOA3CA0A087WX78 387 aaPredicted RBP13.73□□□□□ -0.21
SIN3B-201ENST00000248054 A0A1W2PPQ1 181 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 FAM90A10PA6NDY2 464 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 FAM90A18PA6NE21 464 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 FAM90A16PA6NEW6 464 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 FAM90A20PA6NIJ5 464 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 FAM90A8PA6NJQ4 464 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 FAM90A7PA6NKC0 464 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 FAM90A22PA8MWA6 464 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 FAM90A12PA8MX19 464 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 FAM90A5PA8MXJ8 464 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 FAM90A23PA8MXZ1 464 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 FAM90A15PP0C7V4 464 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 FAM90A13PP0C7W8 464 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 FAM90A14PP0C7W9 464 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 FAM90A24PP0C7X0 464 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 NSUN5P2Q63ZY6 315 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 GVQW1Q8N7I0 195 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 LRRC29Q8WV35 223 aa13.73□□□□□ -0.21
SIN3B-201ENST00000248054 ZNF320A2RRD8 509 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 SFTPCP11686 197 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 SULT1A1P50225 295 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 IQCJQ1A5X6 159 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 ZNF468Q5VIY5 522 aaPredicted RBP13.72□□□□□ -0.21
SIN3B-201ENST00000248054 HIST1H2BAQ96A08 127 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 POM121L2Q96KW2 1035 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 J3QW42 95 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 MASP2O00187 686 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 CNN1P51911 297 aaKnown RBP13.72□□□□□ -0.21
SIN3B-201ENST00000248054 FOXO1Q12778 655 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 KCNMB1Q16558 191 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 NEIL1Q96FI4 390 aaPredicted RBP13.72□□□□□ -0.21
SIN3B-201ENST00000248054 TCF20Q9UGU0 1960 aaKnown RBP13.72□□□□□ -0.21
SIN3B-201ENST00000248054 LOC390937A0A1W2PQ73 354 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 CST7O76096 145 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 TNFAIP6P98066 277 aaPredicted RBP13.72□□□□□ -0.21
SIN3B-201ENST00000248054 ARL16Q0P5N6 197 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 TMEM241Q24JQ0 296 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 C1orf185Q5T7R7 199 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 MDP1Q86V88 176 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 SMDT1Q9H4I9 107 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 G6PC2Q9NQR9 355 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 OR6C3Q9NZP0 311 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 FOXJ2Q9P0K8 574 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 NRN1LQ496H8 165 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 CTDSP1Q9GZU7 261 aa13.72□□□□□ -0.21
SIN3B-201ENST00000248054 OR7C2O60412 319 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 CNIH1O95406 144 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 TAS2R60P59551 318 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 SUMO1P63165 101 aaKnown RBP13.71□□□□□ -0.21
SIN3B-201ENST00000248054 NAAAQ02083 359 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 HIKESHIQ53FT3 197 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 RND1Q92730 232 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 LOC101059948A0A1B0GTJ6 334 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 ADAM20O43506 726 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 C19orf35Q6ZS72 473 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 OR5C1Q8NGR4 320 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 PRDM14Q9GZV8 571 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 PIN1P1O15428 100 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 OPN1MWP04001 364 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 OPN1MW2P0DN77 364 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 OPN1MW3P0DN78 364 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 EFNB2P52799 333 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 SLC38A11Q08AI6 406 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 COX19Q49B96 90 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 TGIF2LXQ8IUE1 241 aa13.71□□□□□ -0.21
SIN3B-201ENST00000248054 YTHDF2Q9Y5A9 579 aaKnown RBP13.71□□□□□ -0.21
SIN3B-201ENST00000248054 PTPRZ1P23471 2315 aaPredicted RBP13.71□□□□□ -0.21
SIN3B-201ENST00000248054 UBE2L5PA0A1B0GUS4 154 aa13.71□□□□□ -0.22
SIN3B-201ENST00000248054 MFNGO00587 321 aa13.71□□□□□ -0.22
SIN3B-201ENST00000248054 NKX2-8O15522 239 aa13.71□□□□□ -0.22
SIN3B-201ENST00000248054 CEACAM21Q3KPI0 293 aa13.71□□□□□ -0.22
SIN3B-201ENST00000248054 VAX1Q5SQQ9 334 aa13.71□□□□□ -0.22
SIN3B-201ENST00000248054 NECAP1Q8NC96 275 aa13.71□□□□□ -0.22
SIN3B-201ENST00000248054 ERRFI1Q9UJM3 462 aaPredicted RBP13.71□□□□□ -0.22
SIN3B-201ENST00000248054 MYLKQ15746 1914 aa13.71□□□□□ -0.22
SIN3B-201ENST00000248054 DUXBA0A1W2PPF3 345 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 GEMIN2O14893 280 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms