RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 OCIAD1Q9NX40 245 aa8.13□□□□□ -1.11
HLA-DOA-201ENST00000229829 RARRES3Q9UL19 164 aa8.13□□□□□ -1.11
HLA-DOA-201ENST00000229829 ZNF850A8MQ14 1090 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 MKRN2OSH3BPM6 223 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 CD55P08174 381 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 OR5AC1P0C628 307 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 CEACAM1P13688 526 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 CD82P27701 267 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 NTF4P34130 210 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 CLN3Q13286 438 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 RAET1LQ5VY80 246 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 OR5R1Q8NH85 324 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 OR5B12Q96R08 314 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 WNT5BQ9H1J7 359 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 PRDM6Q9NQX0 595 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 TMED3Q9Y3Q3 217 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 IGHV5-10-1A0A0J9YXX1 117 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 A0A0U1RQV5 110 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 ZNHIT1O43257 154 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 DHHO43323 396 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 CCL3P10147 92 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 PIGYQ3MUY2 71 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 Q6ZVH6 145 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 TMEM183AQ8IXX5 376 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 CMTM1Q8IZ96 169 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 OR11L1Q8NGX0 322 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 TUBD1Q9UJT1 453 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 C20orf202A1L168 122 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 DVL1O14640 695 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 CTSDP07339 412 aaPredicted RBP8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 FGF5P12034 268 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 ATP6V0CP27449 155 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 IL22RA1Q8N6P7 574 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 ZIC4Q8N9L1 334 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 OR10A7Q8NGE5 316 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 OR52M1Q8NGK5 317 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 RNASE8Q8TDE3 154 aaKnown RBP8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 PP6455Q8WZ26 134 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 MS4A10Q96PG2 267 aa8.12□□□□□ -1.11
HLA-DOA-201ENST00000229829 ZNF407Q9C0G0 2248 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 LOC102725191A0A1B0GVB3 256 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 NPIPA2E9PIF3 369 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 NPIPA3F8WFD2 350 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 OTX1P32242 354 aaPredicted RBP8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 GLIPR1P48060 266 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 CARD18P57730 90 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 ANKRD39Q53RE8 183 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 ZNF774Q6NX45 483 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 LFNGQ8NES3 379 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 C22orf15Q8WYQ4 148 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 TMEM54Q969K7 222 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 CLDN23Q96B33 292 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 PROK2Q9HC23 129 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 DKKL1Q9UK85 242 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 HEATR1Q9H583 2144 aaKnown RBP8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 IGKV1-12A0A0C4DH73 117 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 B4E171 279 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 TNFSF11O14788 317 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 ZIC3O60481 467 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 IGKV1D-12P01611 117 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 ERVFC1-1P60608 527 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 TLE4Q04727 773 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 PRSS8Q16651 343 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 C10orf128Q5T292 105 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 Q6ZPA2 131 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 RTN4IP1Q8WWV3 396 aaPredicted RBP8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 PCGF1Q9BSM1 259 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 SCRT1Q9BWW7 348 aa8.11□□□□□ -1.11
HLA-DOA-201ENST00000229829 NSG1A0A0A6YYJ2 146 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 LY6G6EA0A0G2JKS1 128 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 A0A0J9YW62 118 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 E5RGE8 158 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 HSD17B6O14756 317 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 TOX3O15405 576 aaPredicted RBP8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 SRP19P09132 144 aaKnown RBP8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 SEC11BP0C7V7 166 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 BMP5P22003 454 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 HIST1H3AP68431 136 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 TMEM187Q14656 261 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 RTP5Q14D33 572 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 SPIN3Q5JUX0 258 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 DNASE2BQ8WZ79 361 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 SRXN1Q9BYN0 137 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 ULBP2Q9BZM5 246 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 NSG2Q9Y328 171 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 STRAPQ9Y3F4 350 aaKnown RBP8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 U3KQA8 63 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 PRRC2CQ9Y520 2896 aaKnown RBP8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 RRP8O43159 456 aaKnown RBP8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 IL18BPO95998 194 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 HPRT1P00492 218 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 HIKESHIQ53FT3 197 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 BEND2Q8NDZ0 799 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 OR14L1PQ8NHC6 308 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 R3HDM4Q96D70 268 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 GPHA2Q96T91 129 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 GINS3Q9BRX5 216 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 DECR2Q9NUI1 292 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 FREM1Q5H8C1 2179 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 H7BYZ3 331 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms