RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 CTDSP2O14595 271 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 RCC1P18754 421 aaPredicted RBP12.3□□□□□ -0.44
RPA3-201ENST00000223129 OMGP23515 440 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 CDK2P24941 298 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 C17orf58Q2M2W7 97 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 Q6ZPA2 131 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 PDZD9Q8IXQ8 264 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 KIR3DL3Q8N743 410 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 MINDY2Q8NBR6 621 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 UBALD1Q8TB05 177 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 S100A16Q96FQ6 103 aaKnown RBP12.3□□□□□ -0.44
RPA3-201ENST00000223129 NCOR1P1Q9H4R4 102 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 TRAV18A0A075B6X5 111 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 C17orf98A8MV24 154 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 M0R1W7 72 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 CA11O75493 328 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 MMP23AO75900 390 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 CGB3P0DN86 165 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 CGB7P0DN87 165 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 ELK1P19419 428 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 MADCAM1Q13477 382 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 TRIM16LQ309B1 348 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 ZNF782Q6ZMW2 699 aaPredicted RBP12.3□□□□□ -0.44
RPA3-201ENST00000223129 RFESDQ8TAC1 157 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 CMSS1Q9BQ75 279 aaKnown RBP12.3□□□□□ -0.44
RPA3-201ENST00000223129 CHMP1AQ9HD42 196 aaPredicted RBP12.3□□□□□ -0.44
RPA3-201ENST00000223129 AKIP1Q9NQ31 210 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 DIABLOQ9NR28 239 aa12.3□□□□□ -0.44
RPA3-201ENST00000223129 ATP6V1G1O75348 118 aa12.29□□□□□ -0.44
RPA3-201ENST00000223129 PTHLHP12272 177 aa12.29□□□□□ -0.44
RPA3-201ENST00000223129 SSTR5P35346 364 aa12.29□□□□□ -0.44
RPA3-201ENST00000223129 GDNFP39905 211 aa12.29□□□□□ -0.44
RPA3-201ENST00000223129 ZNF260Q3ZCT1 412 aa12.29□□□□□ -0.44
RPA3-201ENST00000223129 KLF17Q5JT82 389 aaPredicted RBP12.29□□□□□ -0.44
RPA3-201ENST00000223129 BAIAP2L2Q6UXY1 529 aa12.29□□□□□ -0.44
RPA3-201ENST00000223129 C1orf122Q6ZSJ8 110 aa12.29□□□□□ -0.44
RPA3-201ENST00000223129 SETD6Q8TBK2 473 aa12.29□□□□□ -0.44
RPA3-201ENST00000223129 LHX4Q969G2 390 aa12.29□□□□□ -0.44
RPA3-201ENST00000223129 UPRTQ96BW1 309 aa12.29□□□□□ -0.44
RPA3-201ENST00000223129 NEURL2Q9BR09 285 aa12.29□□□□□ -0.44
RPA3-201ENST00000223129 METTL8Q9H825 291 aaKnown RBP12.29□□□□□ -0.44
RPA3-201ENST00000223129 TAS2R3Q9NYW6 316 aa12.29□□□□□ -0.44
RPA3-201ENST00000223129 PAIP2BQ9ULR5 123 aaKnown RBP12.29□□□□□ -0.44
RPA3-201ENST00000223129 TMEM235A6NFC5 223 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 RGS5O15539 181 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 SCGNO76038 276 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 NAPSAO96009 420 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 APOA1P02647 267 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 IGHV4-38-2P0DP08 117 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 KLRD1Q13241 179 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 OXA1LQ15070 435 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 PRAMEF5Q5TYX0 476 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 TNFRSF14Q92956 283 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 C6orf62Q9GZU0 229 aaPredicted RBP12.28□□□□□ -0.44
RPA3-201ENST00000223129 MIXL1Q9H2W2 232 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 GAL3ST2Q9H3Q3 398 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 TMEM160Q9NX00 188 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 CALYQ9NYX4 217 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 TRAV40A0A0B4J280 105 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 KBTBD11-OT1A0A1B0GTJ5 212 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 ZNF729A6NN14 1252 aaPredicted RBP12.28□□□□□ -0.44
RPA3-201ENST00000223129 FAM25AB3EWG3 89 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 FAM25CB3EWG5 89 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 FAM25GB3EWG6 89 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 XRCC3O43542 346 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 CD3GP09693 182 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 IGHV1-8P0DP01 117 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 GZMHP20718 246 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 PRTN3P24158 256 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 ARFRP1Q13795 201 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 LTC4SQ16873 150 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 PRR18Q8N4B5 295 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 MCFD2Q8NI22 146 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 ARL11Q969Q4 196 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 CMTM3Q96MX0 182 aa12.28□□□□□ -0.44
RPA3-201ENST00000223129 CENPVL3A0A0U1RRI6 287 aa12.27□□□□□ -0.44
RPA3-201ENST00000223129 hCG_1809904A0A1W2PP81 198 aa12.27□□□□□ -0.44
RPA3-201ENST00000223129 A0A1W2PPE2 198 aa12.27□□□□□ -0.44
RPA3-201ENST00000223129 A0A1W2PR64 198 aa12.27□□□□□ -0.44
RPA3-201ENST00000223129 A0A1W2PRV1 198 aa12.27□□□□□ -0.44
RPA3-201ENST00000223129 SERPINE3A8MV23 424 aa12.27□□□□□ -0.44
RPA3-201ENST00000223129 C12orf77C9JDV5 145 aa12.27□□□□□ -0.44
RPA3-201ENST00000223129 RNASEK-C17orf49H0YIS7 233 aa12.27□□□□□ -0.44
RPA3-201ENST00000223129 C15orf65H3BRN8 121 aa12.27□□□□□ -0.44
RPA3-201ENST00000223129 UTF1Q5T230 341 aa12.27□□□□□ -0.44
RPA3-201ENST00000223129 HACD4Q5VWC8 232 aa12.27□□□□□ -0.44
RPA3-201ENST00000223129 LAX1Q8IWV1 398 aa12.27□□□□□ -0.44
RPA3-201ENST00000223129 NANPQ8TBE9 248 aa12.27□□□□□ -0.44
RPA3-201ENST00000223129 BEX2Q9BXY8 128 aa12.27□□□□□ -0.44
RPA3-201ENST00000223129 NXF2Q9GZY0 626 aaKnown RBP12.27□□□□□ -0.44
RPA3-201ENST00000223129 C12orf4Q9NQ89 552 aa12.27□□□□□ -0.44
RPA3-201ENST00000223129 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.27□□□□□ -0.44
RPA3-201ENST00000223129 MBNL3Q9NUK0 354 aaKnown RBP12.27□□□□□ -0.44
RPA3-201ENST00000223129 ZNF230Q9UIE0 474 aaPredicted RBP12.27□□□□□ -0.44
RPA3-201ENST00000223129 A0A0A6YYH2 397 aa12.27□□□□□ -0.45
RPA3-201ENST00000223129 A0A1W2PRD5 423 aa12.27□□□□□ -0.45
RPA3-201ENST00000223129 A0A1W2PRF3 423 aa12.27□□□□□ -0.45
RPA3-201ENST00000223129 A0A1W2PRM7 423 aa12.27□□□□□ -0.45
RPA3-201ENST00000223129 FAM172BPA6NC97 362 aa12.27□□□□□ -0.45
RPA3-201ENST00000223129 A6NJ64 397 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms