RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 ARV1Q9H2C2 271 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 PLSCR2Q9NRY7 297 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 LAMA5O15230 3695 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 A6NLC8 198 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 IL18BPO95998 194 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 SP1P08047 785 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 PSG2P11465 335 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 SLC10A1Q14973 349 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 RNFT1Q5M7Z0 435 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 CXorf67Q86X51 503 aaPredicted RBP12.47□□□□□ -0.41
CNOT3-201ENST00000221232 CMTM1Q8IZ96 169 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 FAM58AQ8N1B3 248 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 OR5A2Q8NGI9 324 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 MRPL30Q8TCC3 161 aaKnown RBP12.47□□□□□ -0.41
CNOT3-201ENST00000221232 SMCO4Q9NRQ5 59 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 ATP23Q9Y6H3 246 aa12.47□□□□□ -0.41
CNOT3-201ENST00000221232 SPENQ96T58 3664 aaKnown RBP12.46□□□□□ -0.41
CNOT3-201ENST00000221232 CACNA1DQ01668 2161 aa12.46□□□□□ -0.41
CNOT3-201ENST00000221232 DEGS1O15121 323 aa12.46□□□□□ -0.41
CNOT3-201ENST00000221232 SNRPEP62304 92 aaKnown RBP12.46□□□□□ -0.41
CNOT3-201ENST00000221232 FAM209BQ5JX69 171 aa12.46□□□□□ -0.41
CNOT3-201ENST00000221232 OR10J5Q8NHC4 309 aa12.46□□□□□ -0.41
CNOT3-201ENST00000221232 ZPBPQ9BS86 351 aa12.46□□□□□ -0.41
CNOT3-201ENST00000221232 ESPL1Q14674 2120 aa12.46□□□□□ -0.42
CNOT3-201ENST00000221232 A0A1W2PPH5 198 aa12.46□□□□□ -0.42
CNOT3-201ENST00000221232 HSPA12AO43301 675 aa12.46□□□□□ -0.42
CNOT3-201ENST00000221232 NDUFA2O43678 99 aa12.46□□□□□ -0.42
CNOT3-201ENST00000221232 CDS2O95674 445 aa12.46□□□□□ -0.42
CNOT3-201ENST00000221232 TFF1P04155 84 aa12.46□□□□□ -0.42
CNOT3-201ENST00000221232 GRPP07492 148 aa12.46□□□□□ -0.42
CNOT3-201ENST00000221232 ARR3P36575 388 aa12.46□□□□□ -0.42
CNOT3-201ENST00000221232 CEBPDP49716 269 aaPredicted RBP12.46□□□□□ -0.42
CNOT3-201ENST00000221232 TMEM267Q0VDI3 215 aaPredicted RBP12.46□□□□□ -0.42
CNOT3-201ENST00000221232 FAM53AQ6NSI3 398 aaPredicted RBP12.46□□□□□ -0.42
CNOT3-201ENST00000221232 PCSK4Q6UW60 755 aa12.46□□□□□ -0.42
CNOT3-201ENST00000221232 SCRT1Q9BWW7 348 aa12.46□□□□□ -0.42
CNOT3-201ENST00000221232 KCNJ16Q9NPI9 418 aa12.46□□□□□ -0.42
CNOT3-201ENST00000221232 DLL3Q9NYJ7 618 aa12.46□□□□□ -0.42
CNOT3-201ENST00000221232 ZNF175Q9Y473 711 aa12.46□□□□□ -0.42
CNOT3-201ENST00000221232 EP300Q09472 2414 aaPredicted RBP12.45□□□□□ -0.42
CNOT3-201ENST00000221232 hCG_1809904A0A1W2PP81 198 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 A0A1W2PR64 198 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 A0A1W2PRV1 198 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 PLA2G5P39877 138 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 IDH3GP51553 393 aaPredicted RBP12.45□□□□□ -0.42
CNOT3-201ENST00000221232 FAM24BQ8N5W8 94 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 LYPD6BQ8NI32 183 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 TMEM56Q96MV1 263 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 PLEKHF2Q9H8W4 249 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 KCNS2Q9ULS6 477 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 KPTNQ9Y664 436 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 TMEM56-RWDD3S4R434 201 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 BDP1A6H8Y1 2624 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 KIR2DS1A0A191URI9 304 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 A0A1W2PPE2 198 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 SERPINE2P07093 398 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 IAPPP10997 89 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 CD59P13987 128 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 KIR2DS4P43632 304 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 KIR2DS1Q14954 304 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 ALKBH2Q6NS38 261 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 ODF3L1Q8IXM7 274 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 DDA1Q9BW61 102 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 OR2J1Q9GZK6 312 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 OR14J1Q9UGF5 321 aa12.45□□□□□ -0.42
CNOT3-201ENST00000221232 CDIPTO14735 213 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 LYZL6O75951 148 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 GNG3P63215 75 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 SFT2D1Q8WV19 159 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 RNF150Q9ULK6 438 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 SVILO95425 2214 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 OR2B8PP59922 312 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 SLC25A24Q6NUK1 477 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 ADAM5Q6NVV9 412 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 Q6ZRM9 215 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 ZNF573Q86YE8 665 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 Q8NFD4 153 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 GPR146Q96CH1 333 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 C12orf57Q99622 126 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 BIN3Q9NQY0 253 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 TRAPPC2LQ9UL33 140 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 MED12LQ86YW9 2145 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 CDX4O14627 284 aaPredicted RBP12.44□□□□□ -0.42
CNOT3-201ENST00000221232 TXNL1O43396 289 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 WDR1O75083 606 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 VDAC1P21796 283 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 ARG2P78540 354 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 MPV17LQ2QL34 196 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 NRN1LQ496H8 165 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 OR2B11Q5JQS5 317 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 FAM185AQ8N0U4 392 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 PLPPR1Q8TBJ4 325 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 HIST1H2BAQ96A08 127 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 SPIN2AQ99865 258 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 SPIN2BQ9BPZ2 258 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 GPR87Q9BY21 358 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 TAAR3PQ9P1P4 343 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 SPRR3Q9UBC9 169 aa12.44□□□□□ -0.42
CNOT3-201ENST00000221232 K7N7A8 449 aa12.43□□□□□ -0.42
CNOT3-201ENST00000221232 TUSC2O75896 110 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms