RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 MSI2Q96DH6 328 aaKnown RBP14.66□□□□□ -0.06
VRK1-201ENST00000216639 C18orf12Q96KH6 178 aa14.66□□□□□ -0.06
VRK1-201ENST00000216639 DMRTA2Q96SC8 542 aa14.66□□□□□ -0.06
VRK1-201ENST00000216639 MRPL37Q9BZE1 423 aaKnown RBP14.66□□□□□ -0.06
VRK1-201ENST00000216639 HEATR1Q9H583 2144 aaKnown RBP14.66□□□□□ -0.06
VRK1-201ENST00000216639 NGBQ9NPG2 151 aa14.66□□□□□ -0.06
VRK1-201ENST00000216639 IGKV1D-13A0A0B4J2D9 117 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 PIGBOS1A0A0B4J2F0 54 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 SRRM5B3KS81 715 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 HSD17B6O14756 317 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 SPRY3O43610 288 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 B3GALNT1O75752 331 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 IGKV1-13P0DP09 117 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 TNFSF4P23510 183 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 S100A10P60903 97 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 IL15RAQ13261 267 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 PRR18Q8N4B5 295 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 RNF126Q9BV68 326 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 GSX2Q9BZM3 304 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 TAF9BQ9HBM6 251 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 CCL28Q9NRJ3 127 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 ZFP57Q9NU63 452 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 DNAJB11Q9UBS4 358 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 ZDHHC8Q9ULC8 765 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 UBE2J1Q9Y385 318 aaPredicted RBP14.65□□□□□ -0.06
VRK1-201ENST00000216639 TMED3Q9Y3Q3 217 aa14.65□□□□□ -0.06
VRK1-201ENST00000216639 OOEPA6NGQ2 149 aa14.64□□□□□ -0.07
VRK1-201ENST00000216639 RLN2P04090 185 aa14.64□□□□□ -0.07
VRK1-201ENST00000216639 LUMP51884 338 aaPredicted RBP14.64□□□□□ -0.07
VRK1-201ENST00000216639 COL10A1Q03692 680 aa14.64□□□□□ -0.07
VRK1-201ENST00000216639 RAB32Q13637 225 aa14.64□□□□□ -0.07
VRK1-201ENST00000216639 ESCO2Q56NI9 601 aa14.64□□□□□ -0.07
VRK1-201ENST00000216639 OR10V1Q8NGI7 309 aa14.64□□□□□ -0.07
VRK1-201ENST00000216639 PPP1R35Q8TAP8 253 aa14.64□□□□□ -0.07
VRK1-201ENST00000216639 SCARB1Q8WTV0 552 aa14.64□□□□□ -0.07
VRK1-201ENST00000216639 TP53RKQ96S44 253 aa14.64□□□□□ -0.07
VRK1-201ENST00000216639 TMEM222Q9H0R3 208 aa14.64□□□□□ -0.07
VRK1-201ENST00000216639 SEBOXQ9HB31 216 aaPredicted RBP14.64□□□□□ -0.07
VRK1-201ENST00000216639 ERRFI1Q9UJM3 462 aaPredicted RBP14.64□□□□□ -0.07
VRK1-201ENST00000216639 TRAV39A0A0B4J263 110 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 VSTM5A8MXK1 200 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 ABCD4O14678 606 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 GATA4P43694 442 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 C6orf183Q5T699 404 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 MOGAT3Q86VF5 341 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 ARPC5LQ9BPX5 153 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 DNTTIP1Q9H147 329 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 H0YIZ8 118 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 ERVH48-1M5A8F1 160 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 PRDX2P32119 198 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 GABRA2P47869 451 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 MEX3BQ6ZN04 569 aaKnown RBP14.63□□□□□ -0.07
VRK1-201ENST00000216639 LYZL2Q7Z4W2 148 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 ZNF695Q8IW36 515 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 ST6GALNAC3Q8NDV1 305 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 BVESQ8NE79 360 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 ITLN1Q8WWA0 313 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 GALMQ96C23 342 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 AKR1E2Q96JD6 320 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 CNTNAP3BQ96NU0 1288 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 CNTNAP3Q9BZ76 1288 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 OR1A1Q9P1Q5 309 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 IL19Q9UHD0 177 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 KIF25Q9UIL4 384 aa14.63□□□□□ -0.07
VRK1-201ENST00000216639 RBM7Q9Y580 266 aaKnown RBP14.63□□□□□ -0.07
VRK1-201ENST00000216639 DUXBA0A1W2PPF3 345 aa14.62□□□□□ -0.07
VRK1-201ENST00000216639 LINC00862A6NCI5 91 aa14.62□□□□□ -0.07
VRK1-201ENST00000216639 DPRXA6NFQ7 191 aa14.62□□□□□ -0.07
VRK1-201ENST00000216639 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.62□□□□□ -0.07
VRK1-201ENST00000216639 SPDEFO95238 335 aa14.62□□□□□ -0.07
VRK1-201ENST00000216639 THBDP07204 575 aa14.62□□□□□ -0.07
VRK1-201ENST00000216639 OR3A1P47881 315 aa14.62□□□□□ -0.07
VRK1-201ENST00000216639 TNFAIP6P98066 277 aaPredicted RBP14.62□□□□□ -0.07
VRK1-201ENST00000216639 AESQ08117 197 aa14.62□□□□□ -0.07
VRK1-201ENST00000216639 BEX5Q5H9J7 111 aa14.62□□□□□ -0.07
VRK1-201ENST00000216639 KRBOX4Q5JUW0 171 aa14.62□□□□□ -0.07
VRK1-201ENST00000216639 TMEM268Q5VZI3 342 aa14.62□□□□□ -0.07
VRK1-201ENST00000216639 TRAT1Q6PIZ9 186 aa14.62□□□□□ -0.07
VRK1-201ENST00000216639 ST8SIA2Q92186 375 aa14.62□□□□□ -0.07
VRK1-201ENST00000216639 ERGIC1Q969X5 290 aa14.62□□□□□ -0.07
VRK1-201ENST00000216639 TMEM56Q96MV1 263 aa14.62□□□□□ -0.07
VRK1-201ENST00000216639 ZNF471Q9BX82 626 aaPredicted RBP14.62□□□□□ -0.07
VRK1-201ENST00000216639 OR5AC2Q9NZP5 309 aa14.62□□□□□ -0.07
VRK1-201ENST00000216639 TMEM56-RWDD3S4R434 201 aa14.62□□□□□ -0.07
VRK1-201ENST00000216639 SPENQ96T58 3664 aaKnown RBP14.62□□□□□ -0.07
VRK1-201ENST00000216639 F5H0A9 414 aaPredicted RBP14.61□□□□□ -0.07
VRK1-201ENST00000216639 H0Y980 276 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 PGLYRP1O75594 196 aaPredicted RBP14.61□□□□□ -0.07
VRK1-201ENST00000216639 HEXAP06865 529 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 PSG2P11465 335 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 EGR1P18146 543 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 IL2RGP31785 369 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 CA7P43166 264 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 ASCL1P50553 236 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 PAX5Q02548 391 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 BSPH1Q075Z2 132 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 ALKAL2Q6UX46 152 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 GCSAMQ8N6F7 178 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 SLC35G3Q8N808 338 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 BOLLQ8N9W6 283 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms