RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 ZNF727A8MUV8 499 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 PATE3B3GLJ2 98 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 HSD17B6O14756 317 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 ATXN7O15265 892 aaPredicted RBP11.86□□□□□ -0.51
PHGDH-233ENST00000642021 TNFSF12O43508 249 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 SMIM6P0DI80 62 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 DYNLT3P51808 116 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 FOXG1P55316 489 aaPredicted RBP11.86□□□□□ -0.51
PHGDH-233ENST00000642021 RND3P61587 244 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 RIPPLY2Q5TAB7 128 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 SUMF2Q8NBJ7 301 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 PLPPR1Q8TBJ4 325 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 PLEKHF2Q9H8W4 249 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 NIT2Q9NQR4 276 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 CCL28Q9NRJ3 127 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 UFSP2Q9NUQ7 469 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 A0A1B0GW64 132 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 NAPSAO96009 420 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 S100A8P05109 93 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 CFIP05156 583 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 GPM6AP51674 278 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 PCBD1P61457 104 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 ZNF266Q14584 549 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 C16orf54Q6UWD8 224 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 COLCA1Q6ZS62 124 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 Q8NFD4 153 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 CA5BP1Q8WTZ4 195 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 PRRG4Q9BZD6 226 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 MTCH1Q9NZJ7 389 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 SIT1Q9Y3P8 196 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 PITX3O75364 302 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 TK1P04183 234 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 FOLR3P41439 243 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 CEBPGP53567 150 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 ZFP36L1Q07352 338 aaKnown RBP11.85□□□□□ -0.51
PHGDH-233ENST00000642021 NMSQ5H8A3 153 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 SP5Q6BEB4 398 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-233ENST00000642021 LFNGQ8NES3 379 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 EDARADDQ8WWZ3 215 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 PRDM6Q9NQX0 595 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 LIPGQ9Y5X9 500 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 COL6A3P12111 3177 aa11.85□□□□□ -0.51
PHGDH-233ENST00000642021 ZNF503-AS2A6NEH8 195 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 NTN3O00634 580 aaPredicted RBP11.84□□□□□ -0.51
PHGDH-233ENST00000642021 TXNL1O43396 289 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 CHST1O43916 411 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 OR2C1O95371 312 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 OTX2P32243 289 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 ID3Q02535 119 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 AARDQ4LEZ3 155 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 C20orf204Q6ZNR8 217 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 MALSU1Q96EH3 234 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 REPIN1Q9BWE0 567 aaKnown RBP11.84□□□□□ -0.51
PHGDH-233ENST00000642021 PRDM14Q9GZV8 571 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 H0YL77 283 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 HLA-HP01893 362 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 S100A9P06702 114 aaKnown RBP11.84□□□□□ -0.51
PHGDH-233ENST00000642021 COX5BP10606 129 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 PAX9P55771 341 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 SRPXP78539 464 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 ZNF154Q13106 437 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 PRDX4Q13162 271 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 NCMAPQ5T1S8 102 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 PMS2CLQ68D20 193 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 PPP1R32Q7Z5V6 425 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 FAM185AQ8N0U4 392 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 MIOXQ9UGB7 285 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 A0A0G2JRQ6 117 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 H3BQ15 152 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 CYTIPO60759 359 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 ARF1P84077 181 aaKnown RBP11.84□□□□□ -0.51
PHGDH-233ENST00000642021 HIKESHIQ53FT3 197 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 HEPN1Q6WQI6 88 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 WDR5BQ86VZ2 330 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 POM121Q96HA1 1249 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 MMP24Q9Y5R2 645 aa11.84□□□□□ -0.51
PHGDH-233ENST00000642021 TUSC2O75896 110 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 SRP19P09132 144 aaKnown RBP11.83□□□□□ -0.52
PHGDH-233ENST00000642021 TMEM11P17152 192 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 UCP1P25874 307 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 GDF1P27539 372 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 VAMP2P63027 116 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 IZUMO4Q1ZYL8 232 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 ZNF343Q6P1L6 599 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 Q6ZS49 121 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 RAB39BQ96DA2 213 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 MUCL1Q96DR8 90 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 ZNF488Q96MN9 340 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 FAM86C1Q9NVL1 165 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 TAAR3PQ9P1P4 343 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 C5orf49A4QMS7 147 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 AP4M1O00189 453 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 SYNGR1O43759 233 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 NGFP01138 241 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 VDAC1P21796 283 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 S100PP25815 95 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 MAS1LP35410 378 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 GPX4P36969 197 aaPredicted RBP11.83□□□□□ -0.52
PHGDH-233ENST00000642021 GFRA1P56159 465 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 FGF12P61328 243 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms