RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 ZNF175Q9Y473 711 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 SVILO95425 2214 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 EP300Q09472 2414 aaPredicted RBP14.37□□□□□ -0.11
PHGDH-223ENST00000641597 IGKV3D-15A0A087WSY6 115 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 BORCS7-ASMTA0A0B4J1R7 106 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 LNP1A1A4G5 178 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 C19orf67A6NJJ6 358 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 M0R036 132 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 TK1P04183 234 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 ARG1P05089 322 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 NKX2-1P43699 371 aaPredicted RBP14.37□□□□□ -0.11
PHGDH-223ENST00000641597 UCP3P55916 312 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 CEACAM21Q3KPI0 293 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 OR2T2Q6IF00 324 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 ZNF565Q8N9K5 539 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 OR51H1Q8NH63 302 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 IL1F10Q8WWZ1 152 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 TMEM45BQ96B21 275 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 SPRY4Q9C004 299 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 TMED3Q9Y3Q3 217 aa14.37□□□□□ -0.11
PHGDH-223ENST00000641597 A6NLC8 198 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 CD300LBA8K4G0 201 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 SEC11BP0C7V7 166 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 CA6P23280 308 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 GNMTQ14749 295 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 AVPI1Q5T686 147 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 CCDC71LQ8N9Z2 235 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 SUMF2Q8NBJ7 301 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 C11orf1Q9H5F2 150 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 C7orf77A4D0Y5 90 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 FBP1P09467 338 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 ZNF44P15621 663 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 ATP6V0CP27449 155 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 PLGLB1Q02325 96 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 HABP2Q14520 560 aaPredicted RBP14.36□□□□□ -0.11
PHGDH-223ENST00000641597 IL13RA2Q14627 380 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 DCAF10Q5QP82 559 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 OR5C1Q8NGR4 320 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 CD300LFQ8TDQ1 290 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 APH1AQ96BI3 265 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 POM121L2Q96KW2 1035 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 DEFB127Q9H1M4 99 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 LUZP4Q9P127 313 aa14.36□□□□□ -0.11
PHGDH-223ENST00000641597 A0A1W2PPE3 182 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 A0A1W2PPH5 198 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 TRAPPC2LH3BP13 241 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 CEBPGP53567 150 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 GPR157Q5UAW9 335 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 P4HA3Q7Z4N8 544 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 TAAR9Q96RI9 348 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 OR1A1Q9P1Q5 309 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 SMG1Q96Q15 3661 aaKnown RBP14.35□□□□□ -0.11
PHGDH-223ENST00000641597 TRAV24A0A0B4J272 114 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 hCG_1809904A0A1W2PP81 198 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 A0A1W2PR64 198 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 A0A1W2PRV1 198 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 EIF3GO75821 320 aaKnown RBP eCLIP14.35□□□□□ -0.11
PHGDH-223ENST00000641597 CELA3BP08861 270 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 MPLP40238 635 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 ZNF154Q13106 437 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 PCSK4Q6UW60 755 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 TMEM252Q8N6L7 170 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 PLPPR1Q8TBJ4 325 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 TTC28Q96AY4 2481 aa14.35□□□□□ -0.11
PHGDH-223ENST00000641597 WISP2O76076 250 aa14.34□□□□□ -0.11
PHGDH-223ENST00000641597 SNRPEP62304 92 aaKnown RBP14.34□□□□□ -0.11
PHGDH-223ENST00000641597 FAM53AQ6NSI3 398 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-223ENST00000641597 OR2G3Q8NGZ4 309 aa14.34□□□□□ -0.11
PHGDH-223ENST00000641597 MRPL30Q8TCC3 161 aaKnown RBP14.34□□□□□ -0.11
PHGDH-223ENST00000641597 APOBEC3DQ96AK3 386 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-223ENST00000641597 KLF2Q9Y5W3 355 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-223ENST00000641597 KMT2EQ8IZD2 1858 aa14.34□□□□□ -0.11
PHGDH-223ENST00000641597 A0A1W2PPE2 198 aa14.34□□□□□ -0.11
PHGDH-223ENST00000641597 ZNF98A6NK75 572 aa14.34□□□□□ -0.11
PHGDH-223ENST00000641597 UMAD1C9J7I0 102 aa14.34□□□□□ -0.11
PHGDH-223ENST00000641597 SYNGR4O95473 234 aa14.34□□□□□ -0.11
PHGDH-223ENST00000641597 HEXAP06865 529 aa14.34□□□□□ -0.11
PHGDH-223ENST00000641597 DYNLT3P51808 116 aa14.34□□□□□ -0.11
PHGDH-223ENST00000641597 ERVS71-1P61550 626 aa14.34□□□□□ -0.11
PHGDH-223ENST00000641597 KRBOX4Q5JUW0 171 aa14.34□□□□□ -0.11
PHGDH-223ENST00000641597 Q8NFD4 153 aa14.34□□□□□ -0.11
PHGDH-223ENST00000641597 HIST1H2BAQ96A08 127 aa14.34□□□□□ -0.11
PHGDH-223ENST00000641597 MRPS18CQ9Y3D5 142 aaKnown RBP14.34□□□□□ -0.11
PHGDH-223ENST00000641597 TNRC6AQ8NDV7 1962 aaKnown RBP14.34□□□□□ -0.11
PHGDH-223ENST00000641597 K7N7A8 449 aa14.33□□□□□ -0.11
PHGDH-223ENST00000641597 CHST1O43916 411 aa14.33□□□□□ -0.11
PHGDH-223ENST00000641597 CDS2O95674 445 aa14.33□□□□□ -0.11
PHGDH-223ENST00000641597 RNFT1Q5M7Z0 435 aa14.33□□□□□ -0.11
PHGDH-223ENST00000641597 TMEM56Q96MV1 263 aa14.33□□□□□ -0.11
PHGDH-223ENST00000641597 C12orf57Q99622 126 aa14.33□□□□□ -0.11
PHGDH-223ENST00000641597 PLSCR2Q9NRY7 297 aa14.33□□□□□ -0.11
PHGDH-223ENST00000641597 TAAR3PQ9P1P4 343 aa14.33□□□□□ -0.11
PHGDH-223ENST00000641597 TMEM56-RWDD3S4R434 201 aa14.33□□□□□ -0.11
PHGDH-223ENST00000641597 IL18BPO95998 194 aa14.33□□□□□ -0.12
PHGDH-223ENST00000641597 MT-CO3P00414 261 aa14.33□□□□□ -0.12
PHGDH-223ENST00000641597 ALKBH6Q3KRA9 238 aa14.33□□□□□ -0.12
PHGDH-223ENST00000641597 NMSQ5H8A3 153 aa14.33□□□□□ -0.12
PHGDH-223ENST00000641597 Q6ZRM9 215 aa14.33□□□□□ -0.12
PHGDH-223ENST00000641597 MKXQ8IYA7 352 aa14.33□□□□□ -0.12
PHGDH-223ENST00000641597 OR5P3Q8WZ94 311 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms