RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 CDK2P24941 298 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 OR10A3P58181 314 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 SLC35E4Q6ICL7 350 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 HEPN1Q6WQI6 88 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 LHFPL4Q7Z7J7 247 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 NR2C2APQ86WQ0 139 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 TAF15Q92804 592 aaKnown RBP eCLIP21.68■■□□□ 1.06
VEGFA-231ENST00000640499 TXNL4BQ9NX01 149 aaKnown RBP21.68■■□□□ 1.06
VEGFA-231ENST00000640499 ZNRD1Q9P1U0 126 aa21.68■■□□□ 1.06
VEGFA-231ENST00000640499 FGF9P31371 208 aaPredicted RBP21.67■■□□□ 1.06
VEGFA-231ENST00000640499 CLDN12P56749 244 aa21.67■■□□□ 1.06
VEGFA-231ENST00000640499 ZNF626Q68DY1 528 aa21.67■■□□□ 1.06
VEGFA-231ENST00000640499 RAB12Q6IQ22 244 aa21.67■■□□□ 1.06
VEGFA-231ENST00000640499 DYNAPQ8N1N2 210 aa21.67■■□□□ 1.06
VEGFA-231ENST00000640499 DYRK2Q92630 601 aa21.67■■□□□ 1.06
VEGFA-231ENST00000640499 CST11Q9H112 138 aa21.67■■□□□ 1.06
VEGFA-231ENST00000640499 OR51E2Q9H255 320 aa21.67■■□□□ 1.06
VEGFA-231ENST00000640499 TMEM133Q9H2Q1 129 aa21.67■■□□□ 1.06
VEGFA-231ENST00000640499 LINC00574Q9H8X3 128 aa21.67■■□□□ 1.06
VEGFA-231ENST00000640499 TNFRSF19Q9NS68 423 aa21.67■■□□□ 1.06
VEGFA-231ENST00000640499 OR6C3Q9NZP0 311 aa21.67■■□□□ 1.06
VEGFA-231ENST00000640499 FAM96BQ9Y3D0 163 aa21.67■■□□□ 1.06
VEGFA-231ENST00000640499 V9GY05 133 aa21.67■■□□□ 1.06
VEGFA-231ENST00000640499 A0A0A6YYD4 124 aa21.66■■□□□ 1.06
VEGFA-231ENST00000640499 KBTBD11-OT1A0A1B0GTJ5 212 aa21.66■■□□□ 1.06
VEGFA-231ENST00000640499 BPNT1O95861 308 aa21.66■■□□□ 1.06
VEGFA-231ENST00000640499 MT-ND4P03905 459 aa21.66■■□□□ 1.06
VEGFA-231ENST00000640499 FBP1P09467 338 aa21.66■■□□□ 1.06
VEGFA-231ENST00000640499 RPS27AP62979 156 aaKnown RBP21.66■■□□□ 1.06
VEGFA-231ENST00000640499 ZNF497Q6ZNH5 498 aa21.66■■□□□ 1.06
VEGFA-231ENST00000640499 RTN4RL2Q86UN3 420 aa21.66■■□□□ 1.06
VEGFA-231ENST00000640499 TSPAN14Q8NG11 270 aa21.66■■□□□ 1.06
VEGFA-231ENST00000640499 OR13D1Q8NGV5 346 aa21.66■■□□□ 1.06
VEGFA-231ENST00000640499 NICN1Q9BSH3 213 aa21.66■■□□□ 1.06
VEGFA-231ENST00000640499 TM2D1Q9BX74 207 aa21.66■■□□□ 1.06
VEGFA-231ENST00000640499 CHIAQ9BZP6 476 aa21.66■■□□□ 1.06
VEGFA-231ENST00000640499 GAL3ST2Q9H3Q3 398 aa21.66■■□□□ 1.06
VEGFA-231ENST00000640499 STUB1Q9UNE7 303 aa21.66■■□□□ 1.06
VEGFA-231ENST00000640499 PEX16Q9Y5Y5 336 aa21.66■■□□□ 1.06
VEGFA-231ENST00000640499 IGHV2-26A0A0B4J1V2 119 aa21.65■■□□□ 1.06
VEGFA-231ENST00000640499 ZNF729A6NN14 1252 aaPredicted RBP21.65■■□□□ 1.06
VEGFA-231ENST00000640499 GLP1RP43220 463 aa21.65■■□□□ 1.06
VEGFA-231ENST00000640499 PLA2G7Q13093 441 aa21.65■■□□□ 1.06
VEGFA-231ENST00000640499 GAPTQ8N292 157 aa21.65■■□□□ 1.06
VEGFA-231ENST00000640499 TMEM86BQ8N661 226 aa21.65■■□□□ 1.06
VEGFA-231ENST00000640499 BEND2Q8NDZ0 799 aa21.65■■□□□ 1.06
VEGFA-231ENST00000640499 OR51D1Q8NGF3 324 aa21.65■■□□□ 1.06
VEGFA-231ENST00000640499 SPATA3Q8NHX4 192 aa21.65■■□□□ 1.06
VEGFA-231ENST00000640499 KCNG3Q8TAE7 436 aa21.65■■□□□ 1.06
VEGFA-231ENST00000640499 MRGPRDQ8TDS7 321 aa21.65■■□□□ 1.06
VEGFA-231ENST00000640499 MEGF9Q9H1U4 602 aa21.65■■□□□ 1.06
VEGFA-231ENST00000640499 ZNF696Q9H7X3 374 aa21.65■■□□□ 1.06
VEGFA-231ENST00000640499 ZMAT3Q9HA38 289 aaKnown RBP21.65■■□□□ 1.06
VEGFA-231ENST00000640499 PLGRKTQ9HBL7 147 aa21.65■■□□□ 1.06
VEGFA-231ENST00000640499 SPACA1Q9HBV2 294 aa21.65■■□□□ 1.06
VEGFA-231ENST00000640499 STAB1Q9NY15 2570 aa21.64■■□□□ 1.06
VEGFA-231ENST00000640499 TRIM64CA6NLI5 447 aa21.64■■□□□ 1.05
VEGFA-231ENST00000640499 NPIPB11E5RHQ5 1161 aa21.64■■□□□ 1.05
VEGFA-231ENST00000640499 LDLRAD4O15165 306 aa21.64■■□□□ 1.05
VEGFA-231ENST00000640499 TNFAIP8O95379 198 aa21.64■■□□□ 1.05
VEGFA-231ENST00000640499 ARG1P05089 322 aa21.64■■□□□ 1.05
VEGFA-231ENST00000640499 FUT3P21217 361 aa21.64■■□□□ 1.05
VEGFA-231ENST00000640499 RAB11BQ15907 218 aa21.64■■□□□ 1.05
VEGFA-231ENST00000640499 ZNF565Q8N9K5 539 aa21.64■■□□□ 1.05
VEGFA-231ENST00000640499 SSMEM1Q8WWF3 244 aa21.64■■□□□ 1.05
VEGFA-231ENST00000640499 KIRREL1Q96J84 757 aa21.64■■□□□ 1.05
VEGFA-231ENST00000640499 TMEM59Q9BXS4 323 aa21.64■■□□□ 1.05
VEGFA-231ENST00000640499 LPAR5Q9H1C0 372 aa21.64■■□□□ 1.05
VEGFA-231ENST00000640499 CALYQ9NYX4 217 aa21.64■■□□□ 1.05
VEGFA-231ENST00000640499 TENM1Q9UKZ4 2725 aa21.63■■□□□ 1.05
VEGFA-231ENST00000640499 TMEM30CPA0ZSE6 113 aa21.63■■□□□ 1.05
VEGFA-231ENST00000640499 TMEM89A2RUT3 159 aa21.63■■□□□ 1.05
VEGFA-231ENST00000640499 FAM172BPA6NC97 362 aa21.63■■□□□ 1.05
VEGFA-231ENST00000640499 ARSBP15848 533 aa21.63■■□□□ 1.05
VEGFA-231ENST00000640499 CFPP27918 469 aa21.63■■□□□ 1.05
VEGFA-231ENST00000640499 CHATP28329 748 aa21.63■■□□□ 1.05
VEGFA-231ENST00000640499 SSTR5P35346 364 aa21.63■■□□□ 1.05
VEGFA-231ENST00000640499 C2orf76Q3KRA6 126 aa21.63■■□□□ 1.05
VEGFA-231ENST00000640499 HES5Q5TA89 166 aa21.63■■□□□ 1.05
VEGFA-231ENST00000640499 C16orf87Q6PH81 154 aa21.63■■□□□ 1.05
VEGFA-231ENST00000640499 RNF167Q9H6Y7 350 aa21.63■■□□□ 1.05
VEGFA-231ENST00000640499 ZNF286AQ9HBT8 521 aa21.63■■□□□ 1.05
VEGFA-231ENST00000640499 FBLN5Q9UBX5 448 aa21.63■■□□□ 1.05
VEGFA-231ENST00000640499 POMT1Q9Y6A1 747 aa21.63■■□□□ 1.05
VEGFA-231ENST00000640499 A0A087WXM4 84 aa21.62■■□□□ 1.05
VEGFA-231ENST00000640499 A0A087X0M5 115 aa21.62■■□□□ 1.05
VEGFA-231ENST00000640499 A0A1B0GX30 115 aa21.62■■□□□ 1.05
VEGFA-231ENST00000640499 MCRIP1C9JLW8 97 aa21.62■■□□□ 1.05
VEGFA-231ENST00000640499 C15orf65H3BRN8 121 aa21.62■■□□□ 1.05
VEGFA-231ENST00000640499 PDCD6O75340 191 aa21.62■■□□□ 1.05
VEGFA-231ENST00000640499 GADD45AP24522 165 aa21.62■■□□□ 1.05
VEGFA-231ENST00000640499 CD34P28906 385 aa21.62■■□□□ 1.05
VEGFA-231ENST00000640499 OR2W3Q7Z3T1 314 aa21.62■■□□□ 1.05
VEGFA-231ENST00000640499 FAM89BQ8N5H3 189 aa21.62■■□□□ 1.05
VEGFA-231ENST00000640499 RFESDQ8TAC1 157 aa21.62■■□□□ 1.05
VEGFA-231ENST00000640499 PIFOQ8TCI5 191 aa21.62■■□□□ 1.05
VEGFA-231ENST00000640499 CCDC107Q8WV48 283 aa21.62■■□□□ 1.05
VEGFA-231ENST00000640499 FAM3DQ96BQ1 224 aa21.62■■□□□ 1.05
VEGFA-231ENST00000640499 CLEC7AQ9BXN2 247 aa21.62■■□□□ 1.05
VEGFA-231ENST00000640499 UBE2QL1A1L167 161 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms