RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 SPSB1Q96BD6 273 aa10.48□□□□□ -0.73
CTSD-208ENST00000636843 SPACA5Q96QH8 159 aa10.48□□□□□ -0.73
CTSD-208ENST00000636843 SLC25A21Q9BQT8 299 aaPredicted RBP10.48□□□□□ -0.73
CTSD-208ENST00000636843 LPAR5Q9H1C0 372 aa10.48□□□□□ -0.73
CTSD-208ENST00000636843 PRDM13Q9H4Q3 707 aa10.48□□□□□ -0.73
CTSD-208ENST00000636843 SCP2D1Q9UJQ7 156 aa10.48□□□□□ -0.73
CTSD-208ENST00000636843 MMP24Q9Y5R2 645 aa10.48□□□□□ -0.73
CTSD-208ENST00000636843 TRAV40A0A0B4J280 105 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 A0A1B0GUS0 222 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 ZNF736B4DX44 427 aaPredicted RBP10.47□□□□□ -0.73
CTSD-208ENST00000636843 F5H5P2 479 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 H0YL77 283 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 MPIG6BO95866 241 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 IRF2P14316 349 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 TBPP20226 339 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 PRKACBP22694 351 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 PTGFRP43088 359 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 ARL6IP1Q15041 203 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 CNN3Q15417 329 aaKnown RBP10.47□□□□□ -0.73
CTSD-208ENST00000636843 UBE2V2Q15819 145 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 PNLIPRP3Q17RR3 467 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 ZNF626Q68DY1 528 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 BHLHE23Q8NDY6 225 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 BEST4Q8NFU0 473 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 OR51S1Q8NGJ8 323 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 OR8S1Q8NH09 359 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 Q8TCH9 128 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 S100A13Q99584 98 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 ALX4Q9H161 411 aaPredicted RBP10.47□□□□□ -0.73
CTSD-208ENST00000636843 SLA2Q9H6Q3 261 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 CLN8Q9UBY8 286 aa10.47□□□□□ -0.73
CTSD-208ENST00000636843 DISC1C4P0D8 188 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 FABP7O15540 132 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 ATP6V1G1O75348 118 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 MDKP21741 143 aaPredicted RBP10.46□□□□□ -0.74
CTSD-208ENST00000636843 MPZP25189 248 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 PMELP40967 661 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 NDUFA5Q16718 116 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 ZBTB37Q5TC79 503 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 WDR25Q64LD2 544 aaPredicted RBP10.46□□□□□ -0.74
CTSD-208ENST00000636843 SLC36A1Q7Z2H8 476 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 TRAPPC6BQ86SZ2 158 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 OR4D10Q8NGI6 311 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 OR11L1Q8NGX0 322 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 CCDC107Q8WV48 283 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 ZDHHC16Q969W1 377 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 TECTBQ96PL2 329 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 SELENOIQ9C0D9 397 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 BEX1Q9HBH7 125 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 IFT46Q9NQC8 304 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 SLC2A8Q9NY64 477 aa10.46□□□□□ -0.74
CTSD-208ENST00000636843 SOX21Q9Y651 276 aaPredicted RBP10.46□□□□□ -0.74
CTSD-208ENST00000636843 DOCK11Q5JSL3 2073 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 IGHV3-64DA0A0J9YX35 117 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 UBE2QL1A1L167 161 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 ENSAO43768 121 aaKnown RBP10.45□□□□□ -0.74
CTSD-208ENST00000636843 CRTAPO75718 401 aaPredicted RBP10.45□□□□□ -0.74
CTSD-208ENST00000636843 AMY2AP04746 511 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 ANXA7P20073 488 aaKnown RBP10.45□□□□□ -0.74
CTSD-208ENST00000636843 CD200P41217 278 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 CBX5P45973 191 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 GNG2P59768 71 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 RPS27AP62979 156 aaKnown RBP10.45□□□□□ -0.74
CTSD-208ENST00000636843 MALLQ13021 153 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 DEFB112Q30KQ8 113 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 PDLIM3Q53GG5 364 aaPredicted RBP10.45□□□□□ -0.74
CTSD-208ENST00000636843 FAM201AQ5SY85 155 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 CLVS2Q5SYC1 327 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 GPR157Q5UAW9 335 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 TMEM42Q69YG0 159 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 CRIP3Q6Q6R5 217 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 LHFPL2Q6ZUX7 228 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 RNF144BQ7Z419 303 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 FAM89BQ8N5H3 189 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 ASCC1Q8N9N2 400 aaKnown RBP10.45□□□□□ -0.74
CTSD-208ENST00000636843 TMEM104Q8NE00 496 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 TNFAIP8L1Q8WVP5 186 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 SPSB4Q96A44 273 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 RAB3CQ96E17 227 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 PRRT1Q99946 306 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 SEC22CQ9BRL7 303 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 TM2D1Q9BX74 207 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 GON7Q9BXV9 100 aa10.45□□□□□ -0.74
CTSD-208ENST00000636843 ZNF436Q9C0F3 470 aaPredicted RBP10.45□□□□□ -0.74
CTSD-208ENST00000636843 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.45□□□□□ -0.74
CTSD-208ENST00000636843 NOP16Q9Y3C1 178 aaKnown RBP10.45□□□□□ -0.74
CTSD-208ENST00000636843 A0A0A6YYD4 124 aa10.44□□□□□ -0.74
CTSD-208ENST00000636843 hCG_38984A0A1B0GV85 526 aa10.44□□□□□ -0.74
CTSD-208ENST00000636843 SRRM5B3KS81 715 aa10.44□□□□□ -0.74
CTSD-208ENST00000636843 HOXA3O43365 443 aaPredicted RBP10.44□□□□□ -0.74
CTSD-208ENST00000636843 RLN1P04808 185 aa10.44□□□□□ -0.74
CTSD-208ENST00000636843 ZNF735P0CB33 412 aa10.44□□□□□ -0.74
CTSD-208ENST00000636843 HIST1H1DP16402 221 aaKnown RBP10.44□□□□□ -0.74
CTSD-208ENST00000636843 GNB3P16520 340 aa10.44□□□□□ -0.74
CTSD-208ENST00000636843 CXCL3P19876 107 aa10.44□□□□□ -0.74
CTSD-208ENST00000636843 ACKR3P25106 362 aa10.44□□□□□ -0.74
CTSD-208ENST00000636843 NPY4RP50391 375 aa10.44□□□□□ -0.74
CTSD-208ENST00000636843 FGF12P61328 243 aa10.44□□□□□ -0.74
CTSD-208ENST00000636843 DEFA6Q01524 100 aa10.44□□□□□ -0.74
CTSD-208ENST00000636843 GK2Q14410 553 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms