RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 KIR2DS1Q14954 304 aa12.49□□□□□ -0.41
CLN6-215ENST00000636674 PDCD1Q15116 288 aa12.49□□□□□ -0.41
CLN6-215ENST00000636674 RNPS1Q15287 305 aaKnown RBP12.49□□□□□ -0.41
CLN6-215ENST00000636674 MPV17LQ2QL34 196 aa12.49□□□□□ -0.41
CLN6-215ENST00000636674 HLA-BQ31612 363 aa12.49□□□□□ -0.41
CLN6-215ENST00000636674 ZNF506Q5JVG8 444 aa12.49□□□□□ -0.41
CLN6-215ENST00000636674 ADAM5Q6NVV9 412 aa12.49□□□□□ -0.41
CLN6-215ENST00000636674 ZNF818PQ6ZRF7 136 aa12.49□□□□□ -0.41
CLN6-215ENST00000636674 OR5D13Q8NGL4 314 aa12.49□□□□□ -0.41
CLN6-215ENST00000636674 OR5C1Q8NGR4 320 aa12.49□□□□□ -0.41
CLN6-215ENST00000636674 PLPPR1Q8TBJ4 325 aa12.49□□□□□ -0.41
CLN6-215ENST00000636674 PIEZO1Q92508 2521 aa12.49□□□□□ -0.41
CLN6-215ENST00000636674 MYO15AQ9UKN7 3530 aa12.48□□□□□ -0.41
CLN6-215ENST00000636674 PIGBOS1A0A0B4J2F0 54 aa12.48□□□□□ -0.41
CLN6-215ENST00000636674 SLC22A20A6NK97 555 aa12.48□□□□□ -0.41
CLN6-215ENST00000636674 LINC00587B1AMM8 73 aa12.48□□□□□ -0.41
CLN6-215ENST00000636674 H0Y980 276 aa12.48□□□□□ -0.41
CLN6-215ENST00000636674 NTN3O00634 580 aaPredicted RBP12.48□□□□□ -0.41
CLN6-215ENST00000636674 IGHEP01854 428 aa12.48□□□□□ -0.41
CLN6-215ENST00000636674 FOLR3P41439 243 aa12.48□□□□□ -0.41
CLN6-215ENST00000636674 ASCL1P50553 236 aa12.48□□□□□ -0.41
CLN6-215ENST00000636674 CCL20P78556 96 aa12.48□□□□□ -0.41
CLN6-215ENST00000636674 HERPUD1Q15011 391 aa12.48□□□□□ -0.41
CLN6-215ENST00000636674 LURAP1LQ8IV03 231 aa12.48□□□□□ -0.41
CLN6-215ENST00000636674 ZFP62Q8NB50 900 aaPredicted RBP12.48□□□□□ -0.41
CLN6-215ENST00000636674 GTF3AQ92664 365 aaKnown RBP12.48□□□□□ -0.41
CLN6-215ENST00000636674 CPNE4Q96A23 557 aaPredicted RBP12.48□□□□□ -0.41
CLN6-215ENST00000636674 RBMXL1Q96E39 390 aaKnown RBP12.48□□□□□ -0.41
CLN6-215ENST00000636674 MED19A0JLT2 244 aaPredicted RBP12.47□□□□□ -0.41
CLN6-215ENST00000636674 HSD17B6O14756 317 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 PPIHO43447 177 aaKnown RBP12.47□□□□□ -0.41
CLN6-215ENST00000636674 CLN5O75503 358 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 WNT2P09544 360 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 BCL3P20749 454 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 HOXA6P31267 233 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 CXorf66Q5JRM2 361 aaPredicted RBP12.47□□□□□ -0.41
CLN6-215ENST00000636674 GAPTQ8N292 157 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 SUMF1Q8NBK3 374 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 REPIN1Q9BWE0 567 aaKnown RBP12.47□□□□□ -0.41
CLN6-215ENST00000636674 TMPRSS5Q9H3S3 457 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 NIT2Q9NQR4 276 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 PUS1Q9Y606 427 aaKnown RBP eCLIP12.47□□□□□ -0.41
CLN6-215ENST00000636674 CDRT15L2A8MXV6 281 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 H3BQ15 152 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 TMEM50AO95807 157 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 HBE1P02100 147 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 SLC25A6P12236 298 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 NQO2P16083 231 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 S100PP25815 95 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 DYNLT3P51808 116 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 ZFP36L1Q07352 338 aaKnown RBP12.47□□□□□ -0.41
CLN6-215ENST00000636674 IL24Q13007 206 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 ICAM4Q14773 271 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 SPIN3Q5JUX0 258 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 IL22RA1Q8N6P7 574 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 CPEB3Q8NE35 698 aaKnown RBP12.47□□□□□ -0.41
CLN6-215ENST00000636674 OR56B2PQ8NGI1 322 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 OR10G4Q8NGN3 311 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 ABHD14AQ9BUJ0 271 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 LINC00470Q9BZP3 86 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 FGF23Q9GZV9 251 aaPredicted RBP12.47□□□□□ -0.41
CLN6-215ENST00000636674 PILRBQ9UKJ0 227 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 RNF115Q9Y4L5 304 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 ATP23Q9Y6H3 246 aa12.47□□□□□ -0.41
CLN6-215ENST00000636674 SDK2Q58EX2 2172 aa12.46□□□□□ -0.41
CLN6-215ENST00000636674 IGKV3D-15A0A087WSY6 115 aa12.46□□□□□ -0.41
CLN6-215ENST00000636674 TRBV6-6A0A0A6YYG2 114 aa12.46□□□□□ -0.41
CLN6-215ENST00000636674 TRAV1-1A0A0B4J248 108 aa12.46□□□□□ -0.41
CLN6-215ENST00000636674 IGKV1D-13A0A0B4J2D9 117 aa12.46□□□□□ -0.41
CLN6-215ENST00000636674 A0A1B0GV50 99 aa12.46□□□□□ -0.41
CLN6-215ENST00000636674 CXorf65A6NEN9 183 aa12.46□□□□□ -0.41
CLN6-215ENST00000636674 SCAF4O95104 1147 aaKnown RBP12.46□□□□□ -0.41
CLN6-215ENST00000636674 SCTP09683 121 aa12.46□□□□□ -0.41
CLN6-215ENST00000636674 IGKV1-13P0DP09 117 aa12.46□□□□□ -0.41
CLN6-215ENST00000636674 OR2B8PP59922 312 aa12.46□□□□□ -0.41
CLN6-215ENST00000636674 PMS2CLQ68D20 193 aa12.46□□□□□ -0.41
CLN6-215ENST00000636674 LINC00596Q86U02 117 aa12.46□□□□□ -0.41
CLN6-215ENST00000636674 RAB39BQ96DA2 213 aa12.46□□□□□ -0.41
CLN6-215ENST00000636674 ATP5SQ99766 215 aa12.46□□□□□ -0.41
CLN6-215ENST00000636674 RIMS4Q9H426 269 aaPredicted RBP12.46□□□□□ -0.41
CLN6-215ENST00000636674 SIRT7Q9NRC8 400 aa12.46□□□□□ -0.41
CLN6-215ENST00000636674 SS18L1O75177 396 aaPredicted RBP12.45□□□□□ -0.42
CLN6-215ENST00000636674 RFPL3SP0C7P2 107 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 COX5BP10606 129 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 CCL4P13236 92 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 OMGP23515 440 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 TLE4Q04727 773 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 PRDX4Q13162 271 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 CEACAM21Q3KPI0 293 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 CMTM1Q8IZ96 169 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 SLAMF9Q96A28 289 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 MAGT1Q9H0U3 335 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 FSCN3Q9NQT6 498 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 LIPGQ9Y5X9 500 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 RFNGQ9Y644 331 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 IGKV1-6A0A0C4DH72 117 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 DFFBO76075 338 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 EPHA1P21709 976 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 PAX9P55771 341 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 GFRA1P56159 465 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms