RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 MUC20Q8N307 709 aaPredicted RBP4.06□□□□□ -1.76
LINC00550-201ENST00000629293 NOXO1Q8NFA2 376 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 OR4D6Q8NGJ1 314 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 CCL17Q92583 94 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 TMEM45BQ96B21 275 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 ELMOD3Q96FG2 381 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 HIST1H2AAQ96QV6 131 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 ULBP2Q9BZM5 246 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 CHIAQ9BZP6 476 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 TNFRSF19Q9NS68 423 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 SLC2A8Q9NY64 477 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 GLTPQ9NZD2 209 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 TAAR3PQ9P1P4 343 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 IGHV3OR16-10A0A075B7F0 116 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 A0A1B0GTI1 187 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 TMEM269A0A1B0GVZ9 245 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 MEIS3P1A6NDR6 274 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 P2RY10O00398 339 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 IGKV3-15P01624 115 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 RRASP10301 218 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 DVL1P1P54792 670 aaPredicted RBP4.06□□□□□ -1.76
LINC00550-201ENST00000629293 BIDP55957 195 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 SELENOVP59797 346 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 SRSF4Q08170 494 aaKnown RBP4.06□□□□□ -1.76
LINC00550-201ENST00000629293 SCGB2A2Q13296 93 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 UNC119Q13432 240 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 HIST3H3Q16695 136 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 SPATA46Q5T0L3 261 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 CCDC144NLQ6NUI1 221 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 UEVLDQ8IX04 471 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 OR8H3Q8N146 312 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 PAQR4Q8N4S7 273 aaPredicted RBP4.06□□□□□ -1.76
LINC00550-201ENST00000629293 C11orf44Q8N8P7 122 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 SGMS2Q8NHU3 365 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 RDH5Q92781 318 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 MRPL24Q96A35 216 aaKnown RBP4.06□□□□□ -1.76
LINC00550-201ENST00000629293 SLAMF6Q96DU3 332 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF442Q9H7R0 627 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 MOB1AQ9H8S9 216 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 LHFPL6Q9Y693 200 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 LOC102725191A0A1B0GVB3 256 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 SPRY2O43597 315 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 B3GALNT1O75752 331 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 H2BFMP0C1H6 154 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF35P13682 527 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 C4BPBP20851 252 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 CCL1P22362 96 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 NFYAP23511 347 aaPredicted RBP4.05□□□□□ -1.76
LINC00550-201ENST00000629293 LAP3P28838 519 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 ERVS71-1P61550 626 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 SEC61A1P61619 476 aaKnown RBP4.05□□□□□ -1.76
LINC00550-201ENST00000629293 KCNMB1Q16558 191 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF260Q3ZCT1 412 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 AWAT1Q58HT5 328 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 LY6G6FQ5SQ64 297 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 PHYHD1Q5SRE7 291 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 THEM4Q5T1C6 240 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 SLC25A47Q6Q0C1 308 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 CORO6Q6QEF8 472 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 CFAP77Q6ZQR2 320 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 RHOUQ7L0Q8 258 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 OR1J2Q8NGS2 313 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 OR13C8Q8NGS7 320 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 DVL3Q92997 716 aaPredicted RBP4.05□□□□□ -1.76
LINC00550-201ENST00000629293 MRGPRFQ96AM1 343 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 ADAT3Q96EY9 351 aaPredicted RBP4.05□□□□□ -1.76
LINC00550-201ENST00000629293 SLC25A21Q9BQT8 299 aaPredicted RBP4.05□□□□□ -1.76
LINC00550-201ENST00000629293 UQCC2Q9BRT2 126 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 CHST6Q9GZX3 395 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 PBOV1Q9GZY1 135 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 PNRC2Q9NPJ4 139 aaKnown RBP4.05□□□□□ -1.76
LINC00550-201ENST00000629293 MED9Q9NWA0 146 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 KIF25Q9UIL4 384 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 ANAPC10Q9UM13 185 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 MAB21L2Q9Y586 359 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 F5H5P2 479 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 RAB3DO95716 219 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 IGLV1-44P01699 117 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 OMGP23515 440 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 BDKRB2P30411 391 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 ZMYND11Q15326 602 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 RAB12Q6IQ22 244 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 COMMD7Q86VX2 200 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 NUP37Q8NFH4 326 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 SEMA6DQ8NFY4 1073 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 OR1M1Q8NGA1 313 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 OR6X1Q8NH79 312 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 C1orf147Q96MC9 270 aaPredicted RBP4.05□□□□□ -1.76
LINC00550-201ENST00000629293 CDH20Q9HBT6 801 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 RAB22AQ9UL26 194 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 TRAV14DV4A0A0A6YYC5 116 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 SH2D7A6NKC9 451 aaPredicted RBP4.05□□□□□ -1.76
LINC00550-201ENST00000629293 TMEM14DPA8MWL7 114 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 TEX22C9J3V5 150 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF878C9JN71 531 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 L7N2F9 121 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 GOSR2O14653 212 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 SPRY3O43610 288 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 SIX6O95475 246 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 CRYZL1O95825 349 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms