RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 ENKURQ8TC29 256 aa19.96■□□□□ 0.79
CAPNS1-216ENST00000628306 ITLN1Q8WWA0 313 aa19.96■□□□□ 0.79
CAPNS1-216ENST00000628306 UPRTQ96BW1 309 aa19.96■□□□□ 0.79
CAPNS1-216ENST00000628306 POLDIP2Q9Y2S7 368 aa19.96■□□□□ 0.79
CAPNS1-216ENST00000628306 MMP24Q9Y5R2 645 aa19.96■□□□□ 0.79
CAPNS1-216ENST00000628306 CEACAM18A8MTB9 384 aa19.95■□□□□ 0.79
CAPNS1-216ENST00000628306 TIMM8AO60220 97 aaPredicted RBP19.95■□□□□ 0.79
CAPNS1-216ENST00000628306 SFTPBP07988 381 aa19.95■□□□□ 0.79
CAPNS1-216ENST00000628306 WNT2P09544 360 aa19.95■□□□□ 0.79
CAPNS1-216ENST00000628306 BLVRBP30043 206 aaPredicted RBP19.95■□□□□ 0.79
CAPNS1-216ENST00000628306 FAUP35544 74 aaKnown RBP19.95■□□□□ 0.79
CAPNS1-216ENST00000628306 SRP9P49458 86 aaKnown RBP19.95■□□□□ 0.79
CAPNS1-216ENST00000628306 FGF12P61328 243 aa19.95■□□□□ 0.79
CAPNS1-216ENST00000628306 LINC00596Q86U02 117 aa19.95■□□□□ 0.79
CAPNS1-216ENST00000628306 Q8IYB0 196 aa19.95■□□□□ 0.79
CAPNS1-216ENST00000628306 OR2Z1Q8NG97 314 aa19.95■□□□□ 0.79
CAPNS1-216ENST00000628306 ST8SIA4Q92187 359 aa19.95■□□□□ 0.79
CAPNS1-216ENST00000628306 ADAT1Q9BUB4 502 aaKnown RBP19.95■□□□□ 0.79
CAPNS1-216ENST00000628306 MS4A7Q9GZW8 240 aaPredicted RBP19.95■□□□□ 0.79
CAPNS1-216ENST00000628306 TLNRD1Q9H1K6 362 aa19.95■□□□□ 0.79
CAPNS1-216ENST00000628306 ANAPC10Q9UM13 185 aa19.95■□□□□ 0.79
CAPNS1-216ENST00000628306 KCNK7Q9Y2U2 307 aa19.95■□□□□ 0.79
CAPNS1-216ENST00000628306 TMEM178BH3BS89 294 aa19.95■□□□□ 0.78
CAPNS1-216ENST00000628306 NOS1APO75052 506 aaPredicted RBP19.95■□□□□ 0.78
CAPNS1-216ENST00000628306 PTBP3O95758 552 aaKnown RBP19.95■□□□□ 0.78
CAPNS1-216ENST00000628306 PTHLHP12272 177 aa19.95■□□□□ 0.78
CAPNS1-216ENST00000628306 SPNP16150 400 aa19.95■□□□□ 0.78
CAPNS1-216ENST00000628306 OMGP23515 440 aa19.95■□□□□ 0.78
CAPNS1-216ENST00000628306 RCVRNP35243 200 aa19.95■□□□□ 0.78
CAPNS1-216ENST00000628306 PLA1AQ53H76 456 aa19.95■□□□□ 0.78
CAPNS1-216ENST00000628306 PLET1Q6UQ28 207 aa19.95■□□□□ 0.78
CAPNS1-216ENST00000628306 OCSTAMPQ9BR26 566 aa19.95■□□□□ 0.78
CAPNS1-216ENST00000628306 PRDM13Q9H4Q3 707 aa19.95■□□□□ 0.78
CAPNS1-216ENST00000628306 HRASLSQ9HDD0 168 aa19.95■□□□□ 0.78
CAPNS1-216ENST00000628306 MTCH1Q9NZJ7 389 aa19.95■□□□□ 0.78
CAPNS1-216ENST00000628306 TMEM235A6NFC5 223 aa19.94■□□□□ 0.78
CAPNS1-216ENST00000628306 NAT1P18440 290 aa19.94■□□□□ 0.78
CAPNS1-216ENST00000628306 TBPP20226 339 aa19.94■□□□□ 0.78
CAPNS1-216ENST00000628306 RBM11P57052 281 aaKnown RBP19.94■□□□□ 0.78
CAPNS1-216ENST00000628306 HAGHLQ6PII5 290 aaPredicted RBP19.94■□□□□ 0.78
CAPNS1-216ENST00000628306 MARVELD1Q9BSK0 173 aa19.94■□□□□ 0.78
CAPNS1-216ENST00000628306 PECRQ9BY49 303 aa19.94■□□□□ 0.78
CAPNS1-216ENST00000628306 IL19Q9UHD0 177 aa19.94■□□□□ 0.78
CAPNS1-216ENST00000628306 ST3GAL6Q9Y274 331 aa19.94■□□□□ 0.78
CAPNS1-216ENST00000628306 CD74P04233 296 aa19.93■□□□□ 0.78
CAPNS1-216ENST00000628306 GLAP06280 429 aa19.93■□□□□ 0.78
CAPNS1-216ENST00000628306 GNB3P16520 340 aa19.93■□□□□ 0.78
CAPNS1-216ENST00000628306 TNFRSF1AP19438 455 aa19.93■□□□□ 0.78
CAPNS1-216ENST00000628306 MDH2P40926 338 aaKnown RBP19.93■□□□□ 0.78
CAPNS1-216ENST00000628306 RAG2P55895 527 aa19.93■□□□□ 0.78
CAPNS1-216ENST00000628306 TAS2R19P59542 299 aa19.93■□□□□ 0.78
CAPNS1-216ENST00000628306 MPV17LQ2QL34 196 aa19.93■□□□□ 0.78
CAPNS1-216ENST00000628306 ESCO2Q56NI9 601 aa19.93■□□□□ 0.78
CAPNS1-216ENST00000628306 CELF2-AS1Q8N7Q2 184 aa19.93■□□□□ 0.78
CAPNS1-216ENST00000628306 WFDC12Q8WWY7 111 aa19.93■□□□□ 0.78
CAPNS1-216ENST00000628306 ARHGAP5-AS1Q96IT6 56 aa19.93■□□□□ 0.78
CAPNS1-216ENST00000628306 NEDD4LQ96PU5 975 aa19.93■□□□□ 0.78
CAPNS1-216ENST00000628306 DPAGT1Q9H3H5 408 aa19.93■□□□□ 0.78
CAPNS1-216ENST00000628306 GCM1Q9NP62 436 aa19.93■□□□□ 0.78
CAPNS1-216ENST00000628306 PPP1R3CQ9UQK1 317 aa19.93■□□□□ 0.78
CAPNS1-216ENST00000628306 DOCK11Q5JSL3 2073 aa19.92■□□□□ 0.78
CAPNS1-216ENST00000628306 MLNRO43193 412 aa19.92■□□□□ 0.78
CAPNS1-216ENST00000628306 BTCP35070 178 aa19.92■□□□□ 0.78
CAPNS1-216ENST00000628306 GNG2P59768 71 aa19.92■□□□□ 0.78
CAPNS1-216ENST00000628306 ERVK11-1P61568 191 aa19.92■□□□□ 0.78
CAPNS1-216ENST00000628306 GUCA2AQ02747 115 aa19.92■□□□□ 0.78
CAPNS1-216ENST00000628306 IL13RA2Q14627 380 aa19.92■□□□□ 0.78
CAPNS1-216ENST00000628306 RNASE12Q5GAN4 147 aaKnown RBP19.92■□□□□ 0.78
CAPNS1-216ENST00000628306 SIGIRRQ6IA17 410 aa19.92■□□□□ 0.78
CAPNS1-216ENST00000628306 CREB3L1Q96BA8 519 aa19.92■□□□□ 0.78
CAPNS1-216ENST00000628306 OR2V2Q96R30 315 aa19.92■□□□□ 0.78
CAPNS1-216ENST00000628306 IFT22Q9H7X7 185 aa19.92■□□□□ 0.78
CAPNS1-216ENST00000628306 TMEM165Q9HC07 324 aa19.92■□□□□ 0.78
CAPNS1-216ENST00000628306 IGHV2-70DA0A0C4DH43 119 aa19.91■□□□□ 0.78
CAPNS1-216ENST00000628306 AKAIN1P0CW23 69 aa19.91■□□□□ 0.78
CAPNS1-216ENST00000628306 FUT3P21217 361 aa19.91■□□□□ 0.78
CAPNS1-216ENST00000628306 CHATP28329 748 aa19.91■□□□□ 0.78
CAPNS1-216ENST00000628306 CD200P41217 278 aa19.91■□□□□ 0.78
CAPNS1-216ENST00000628306 NPBWR2P48146 333 aa19.91■□□□□ 0.78
CAPNS1-216ENST00000628306 RELBQ01201 579 aa19.91■□□□□ 0.78
CAPNS1-216ENST00000628306 TAF9Q16594 264 aa19.91■□□□□ 0.78
CAPNS1-216ENST00000628306 WDR86Q86TI4 376 aa19.91■□□□□ 0.78
CAPNS1-216ENST00000628306 SCCPDHQ8NBX0 429 aa19.91■□□□□ 0.78
CAPNS1-216ENST00000628306 SSBP3Q9BWW4 388 aaPredicted RBP19.91■□□□□ 0.78
CAPNS1-216ENST00000628306 SPACA1Q9HBV2 294 aa19.91■□□□□ 0.78
CAPNS1-216ENST00000628306 PLEKHJ1Q9NW61 149 aa19.91■□□□□ 0.78
CAPNS1-216ENST00000628306 TRAV40A0A0B4J280 105 aa19.9■□□□□ 0.78
CAPNS1-216ENST00000628306 HOXA3O43365 443 aaPredicted RBP19.9■□□□□ 0.78
CAPNS1-216ENST00000628306 SYNGR1O43759 233 aa19.9■□□□□ 0.78
CAPNS1-216ENST00000628306 SSX5O60225 188 aa19.9■□□□□ 0.78
CAPNS1-216ENST00000628306 PDCD6O75340 191 aa19.9■□□□□ 0.78
CAPNS1-216ENST00000628306 BCL3P20749 454 aa19.9■□□□□ 0.78
CAPNS1-216ENST00000628306 TNFSF4P23510 183 aa19.9■□□□□ 0.78
CAPNS1-216ENST00000628306 CFHR2P36980 270 aa19.9■□□□□ 0.78
CAPNS1-216ENST00000628306 DEFB112Q30KQ8 113 aa19.9■□□□□ 0.78
CAPNS1-216ENST00000628306 SLAMF9Q96A28 289 aa19.9■□□□□ 0.78
CAPNS1-216ENST00000628306 NRIP2Q9BQI9 281 aa19.9■□□□□ 0.78
CAPNS1-216ENST00000628306 NLKQ9UBE8 527 aa19.9■□□□□ 0.78
CAPNS1-216ENST00000628306 NUBP2Q9Y5Y2 271 aa19.9■□□□□ 0.78
CAPNS1-216ENST00000628306 FUOMA2VDF0 154 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms