RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 SLC35E4Q6ICL7 350 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 ZNF497Q6ZNH5 498 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 TRAPPC6BQ86SZ2 158 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 FAM185AQ8N0U4 392 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 LINC01356Q8N9X3 169 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 OR6Q1Q8NGQ2 317 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 SETD6Q8TBK2 473 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 CCDC107Q8WV48 283 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 WDFY2Q96P53 400 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 CMSS1Q9BQ75 279 aaKnown RBP7.04□□□□□ -1.28
SGMS1-211ENST00000626236 HDHD3Q9BSH5 251 aaPredicted RBP7.04□□□□□ -1.28
SGMS1-211ENST00000626236 AUNIPQ9H7T9 357 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 C19orf12Q9NSK7 152 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 KIF25Q9UIL4 384 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 RPUSD1Q9UJJ7 312 aaKnown RBP7.04□□□□□ -1.28
SGMS1-211ENST00000626236 MRPS7Q9Y2R9 242 aaKnown RBP7.04□□□□□ -1.28
SGMS1-211ENST00000626236 KCNK7Q9Y2U2 307 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 TEX15Q9BXT5 2789 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 CCDC168Q8NDH2 2452 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 TRBV23-1A0A0A0MS06 115 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 TRAV39A0A0B4J263 110 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 PPIAL4CA0A0B4J2A2 164 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 A0A0G2JMP0 313 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 A0A0X1KG70 313 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 hADV38S2A0JD32 116 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 ODAMA1E959 279 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 SERPINE3A8MV23 424 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 B4DSR2 109 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 MT-ND4P03905 459 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 MSMBP08118 114 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 PPIAL4GP0DN37 164 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 ZNF16P17020 682 aaPredicted RBP7.03□□□□□ -1.28
SGMS1-211ENST00000626236 GLP1RP43220 463 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 GZMKP49863 264 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 GNG2P59768 71 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 PAX5Q02548 391 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 MEF2CQ06413 473 aaPredicted RBP7.03□□□□□ -1.28
SGMS1-211ENST00000626236 IL18Q14116 193 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 ZNF273Q14593 569 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 PNLIPRP3Q17RR3 467 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 HACD4Q5VWC8 232 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 TMEM200BQ69YZ2 307 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 FAM131AQ6UXB0 335 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 BAIAP2L2Q6UXY1 529 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 SNX29P2Q8IUI4 249 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 OR4M2Q8NGB6 313 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 OR4K15Q8NH41 348 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 MRPL30Q8TCC3 161 aaKnown RBP7.03□□□□□ -1.28
SGMS1-211ENST00000626236 MRGPRDQ8TDS7 321 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 NUDCD2Q8WVJ2 157 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 GCDHQ92947 438 aaPredicted RBP7.03□□□□□ -1.28
SGMS1-211ENST00000626236 C1orf159Q96HA4 380 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 C12orf4Q9NQ89 552 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.03□□□□□ -1.28
SGMS1-211ENST00000626236 MMP26Q9NRE1 261 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 ONECUT1Q9UBC0 465 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 LPAR3Q9UBY5 353 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 TRAPPC2LQ9UL33 140 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 CELSR1Q9NYQ6 3014 aa7.03□□□□□ -1.28
SGMS1-211ENST00000626236 ARHGAP32A7KAX9 2087 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 TRGV10A0A0A0MS01 117 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 IGHV2-70DA0A0C4DH43 119 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 A0A1W2PPH5 198 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 MEIS3P1A6NDR6 274 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 FABP12A6NFH5 140 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 ENSAO43768 121 aaKnown RBP7.02□□□□□ -1.29
SGMS1-211ENST00000626236 CA11O75493 328 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 NAPSAO96009 420 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 TGFAP01135 160 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 HLA-DQB1P01920 261 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 LIPFP07098 398 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 PRSS3P35030 304 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 PITPNAQ00169 270 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 C11orf91Q3C1V1 193 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 RNASE12Q5GAN4 147 aaKnown RBP7.02□□□□□ -1.29
SGMS1-211ENST00000626236 SPANXN2Q5MJ10 180 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 CYB5R2Q6BCY4 276 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 BTNL3Q6UXE8 466 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 SPNS3Q6ZMD2 512 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 TCF23Q7RTU1 214 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 CCDC190Q86UF4 302 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 GAPTQ8N292 157 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 LY6G5BQ8NDX9 201 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 OR13A1Q8NGR1 328 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 C8orf46Q8TAG6 207 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 MSI2Q96DH6 328 aaKnown RBP7.02□□□□□ -1.29
SGMS1-211ENST00000626236 COX4I2Q96KJ9 171 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 ABHD1Q96SE0 405 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 RIMS4Q9H426 269 aaPredicted RBP7.02□□□□□ -1.29
SGMS1-211ENST00000626236 OR6C3Q9NZP0 311 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 ZNF230Q9UIE0 474 aaPredicted RBP7.02□□□□□ -1.29
SGMS1-211ENST00000626236 POLR3KQ9Y2Y1 108 aaPredicted RBP7.02□□□□□ -1.29
SGMS1-211ENST00000626236 UBE2J1Q9Y385 318 aaPredicted RBP7.02□□□□□ -1.29
SGMS1-211ENST00000626236 LINC00312Q9Y6C7 94 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 MYO9AB2RTY4 2548 aa7.02□□□□□ -1.29
SGMS1-211ENST00000626236 FLNAP21333 2647 aaKnown RBP7.02□□□□□ -1.29
SGMS1-211ENST00000626236 TRBV6-6A0A0A6YYG2 114 aa7.01□□□□□ -1.29
SGMS1-211ENST00000626236 TRAV20A0A0B4J274 112 aa7.01□□□□□ -1.29
SGMS1-211ENST00000626236 KIR2DS1A0A191URI9 304 aa7.01□□□□□ -1.29
SGMS1-211ENST00000626236 MEIOCA2RUB1 952 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms