RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 CGB3P0DN86 165 aa11.44□□□□□ -0.58
PNKP-218ENST00000625299 CGB7P0DN87 165 aa11.44□□□□□ -0.58
PNKP-218ENST00000625299 TP53I3Q53FA7 332 aa11.44□□□□□ -0.58
PNKP-218ENST00000625299 UTS2BQ765I0 119 aa11.44□□□□□ -0.58
PNKP-218ENST00000625299 IZUMO1Q8IYV9 350 aa11.44□□□□□ -0.58
PNKP-218ENST00000625299 OR51T1Q8NGJ9 327 aa11.44□□□□□ -0.58
PNKP-218ENST00000625299 OR1N2Q8NGR9 330 aa11.44□□□□□ -0.58
PNKP-218ENST00000625299 ISOC1Q96CN7 298 aa11.44□□□□□ -0.58
PNKP-218ENST00000625299 KCTD7Q96MP8 289 aa11.44□□□□□ -0.58
PNKP-218ENST00000625299 GNB4Q9HAV0 340 aa11.44□□□□□ -0.58
PNKP-218ENST00000625299 ARL2BPQ9Y2Y0 163 aa11.44□□□□□ -0.58
PNKP-218ENST00000625299 SULT1C4O75897 302 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 FAM107AO95990 144 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 IGHG4P01861 327 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 OR2T7P0C7T2 308 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 TMEM225BP0DP42 221 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 SPNP16150 400 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 HTR1FP30939 366 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 ATP6V1E1P36543 226 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 CFHR3Q02985 330 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 GABPB1Q06547 395 aaPredicted RBP11.43□□□□□ -0.58
PNKP-218ENST00000625299 ZNF816Q0VGE8 651 aaPredicted RBP11.43□□□□□ -0.58
PNKP-218ENST00000625299 EBI3Q14213 229 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 CDK5R1Q15078 307 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 SRSF7Q16629 238 aaKnown RBP eCLIP11.43□□□□□ -0.58
PNKP-218ENST00000625299 ASPHD1Q5U4P2 390 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 FAM53AQ6NSI3 398 aaPredicted RBP11.43□□□□□ -0.58
PNKP-218ENST00000625299 ZNF429Q86V71 674 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 Q8N6K4 173 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 DNAJC9Q8WXX5 260 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 UTP4Q969X6 686 aaKnown RBP11.43□□□□□ -0.58
PNKP-218ENST00000625299 RBMXL1Q96E39 390 aaKnown RBP11.43□□□□□ -0.58
PNKP-218ENST00000625299 S1PR3Q99500 378 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 BARHL1Q9BZE3 327 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 MED4Q9NPJ6 270 aa11.43□□□□□ -0.58
PNKP-218ENST00000625299 TRIM64CA6NLI5 447 aa11.42□□□□□ -0.58
PNKP-218ENST00000625299 MITFO75030 526 aaPredicted RBP11.42□□□□□ -0.58
PNKP-218ENST00000625299 GP9P14770 177 aa11.42□□□□□ -0.58
PNKP-218ENST00000625299 PSMB8P28062 276 aa11.42□□□□□ -0.58
PNKP-218ENST00000625299 SOX6P35712 828 aa11.42□□□□□ -0.58
PNKP-218ENST00000625299 DAPP51397 102 aa11.42□□□□□ -0.58
PNKP-218ENST00000625299 GNB1P62873 340 aa11.42□□□□□ -0.58
PNKP-218ENST00000625299 ZNF616Q08AN1 781 aa11.42□□□□□ -0.58
PNKP-218ENST00000625299 TMEM244Q5VVB8 128 aa11.42□□□□□ -0.58
PNKP-218ENST00000625299 TMEM65Q6PI78 240 aa11.42□□□□□ -0.58
PNKP-218ENST00000625299 SPATA24Q86W54 205 aa11.42□□□□□ -0.58
PNKP-218ENST00000625299 OR13C3Q8NGS6 347 aa11.42□□□□□ -0.58
PNKP-218ENST00000625299 PLPPR1Q8TBJ4 325 aa11.42□□□□□ -0.58
PNKP-218ENST00000625299 DCUN1D4Q92564 292 aa11.42□□□□□ -0.58
PNKP-218ENST00000625299 RHOFQ9HBH0 211 aa11.42□□□□□ -0.58
PNKP-218ENST00000625299 WARS2Q9UGM6 360 aaKnown RBP11.42□□□□□ -0.58
PNKP-218ENST00000625299 TRAV24A0A0B4J272 114 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 AQP12BA6NM10 295 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 NPIPB11E5RHQ5 1161 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 OVOL1O14753 267 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 FKBP6O75344 327 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 MOSP00540 346 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 SLC2A2P11168 524 aaPredicted RBP11.41□□□□□ -0.58
PNKP-218ENST00000625299 MYF6P23409 242 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 EPHA2P29317 976 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 ZSCAN26Q16670 478 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 RSBN1Q5VWQ0 802 aaPredicted RBP11.41□□□□□ -0.58
PNKP-218ENST00000625299 FAHD1Q6P587 224 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 AQP12AQ8IXF9 295 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 SAXO1Q8IYX7 474 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 OR51A4Q8NGJ6 313 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 OR2G2Q8NGZ5 317 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 OR10AC1Q8NH08 325 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 UBALD1Q8TB05 177 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 NSL1Q96IY1 281 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 KLK15Q9H2R5 256 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 PLSCR3Q9NRY6 295 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 FAM118AQ9NWS6 357 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 MYRFQ9Y2G1 1151 aa11.41□□□□□ -0.58
PNKP-218ENST00000625299 ZAR1LA6NP61 321 aa11.4□□□□□ -0.58
PNKP-218ENST00000625299 ZNF736B4DX44 427 aaPredicted RBP11.4□□□□□ -0.58
PNKP-218ENST00000625299 OR5H8P0DN80 308 aa11.4□□□□□ -0.58
PNKP-218ENST00000625299 MTNR1BP49286 362 aa11.4□□□□□ -0.58
PNKP-218ENST00000625299 EFNB1P98172 346 aa11.4□□□□□ -0.58
PNKP-218ENST00000625299 LPCAT4Q643R3 524 aa11.4□□□□□ -0.58
PNKP-218ENST00000625299 C12orf73Q69YU5 71 aa11.4□□□□□ -0.58
PNKP-218ENST00000625299 SLC16A12Q6ZSM3 486 aa11.4□□□□□ -0.58
PNKP-218ENST00000625299 OR10A7Q8NGE5 316 aa11.4□□□□□ -0.58
PNKP-218ENST00000625299 CNIH3Q8TBE1 160 aa11.4□□□□□ -0.58
PNKP-218ENST00000625299 UBE2E2Q96LR5 201 aa11.4□□□□□ -0.58
PNKP-218ENST00000625299 MBOAT4Q96T53 435 aa11.4□□□□□ -0.58
PNKP-218ENST00000625299 LINC00574Q9H8X3 128 aa11.4□□□□□ -0.58
PNKP-218ENST00000625299 FRRS1LQ9P0K9 344 aa11.4□□□□□ -0.58
PNKP-218ENST00000625299 ZNF107Q9UII5 783 aaPredicted RBP11.4□□□□□ -0.58
PNKP-218ENST00000625299 VSIG4Q9Y279 399 aa11.4□□□□□ -0.58
PNKP-218ENST00000625299 WSB1Q9Y6I7 421 aa11.4□□□□□ -0.58
PNKP-218ENST00000625299 IGHV3-43A0A0B4J1X8 118 aa11.39□□□□□ -0.59
PNKP-218ENST00000625299 I3L521 148 aa11.39□□□□□ -0.59
PNKP-218ENST00000625299 SDCBPO00560 298 aaPredicted RBP11.39□□□□□ -0.59
PNKP-218ENST00000625299 IGHV3-43DP0DP04 118 aa11.39□□□□□ -0.59
PNKP-218ENST00000625299 DBTP11182 482 aaKnown RBP11.39□□□□□ -0.59
PNKP-218ENST00000625299 IL3RAP26951 378 aa11.39□□□□□ -0.59
PNKP-218ENST00000625299 CD1BP29016 333 aa11.39□□□□□ -0.59
PNKP-218ENST00000625299 SLURP1P55000 103 aa11.39□□□□□ -0.59
PNKP-218ENST00000625299 F2RL1P55085 397 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms