RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 GABARAPH6UMI1 98 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 CLDN34H7C241 214 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 DVL1O14640 695 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 GEMIN2O14893 280 aaKnown RBP10.44□□□□□ -0.74
PNKP-217ENST00000625216 AKR7A2O43488 359 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 NOS1APO75052 506 aaPredicted RBP10.44□□□□□ -0.74
PNKP-217ENST00000625216 GYPAP02724 150 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 IGHV4-38-2P0DP08 117 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 GNB3P16520 340 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 CHATP28329 748 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 BLVRBP30043 206 aaPredicted RBP10.44□□□□□ -0.74
PNKP-217ENST00000625216 BAMBIQ13145 260 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 PDCD1Q15116 288 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 ATPAF1Q5TC12 328 aaPredicted RBP10.44□□□□□ -0.74
PNKP-217ENST00000625216 GPR157Q5UAW9 335 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 Q6ZTK2 550 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 SLC36A1Q7Z2H8 476 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 BCL6BQ8N143 479 aaPredicted RBP10.44□□□□□ -0.74
PNKP-217ENST00000625216 FAM58AQ8N1B3 248 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 RAB3CQ96E17 227 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 ARHGAP5-AS1Q96IT6 56 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 PECRQ9BY49 303 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 DNTTIP1Q9H147 329 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 HES4Q9HCC6 221 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 PCDHB16Q9NRJ7 776 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 TBC1D24Q9ULP9 559 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 ST3GAL6Q9Y274 331 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 TMPRSS2O15393 492 aa10.43□□□□□ -0.74
PNKP-217ENST00000625216 MELTFP08582 738 aa10.43□□□□□ -0.74
PNKP-217ENST00000625216 ACAA1P09110 424 aaPredicted RBP10.43□□□□□ -0.74
PNKP-217ENST00000625216 GDNFP39905 211 aa10.43□□□□□ -0.74
PNKP-217ENST00000625216 GMFBP60983 142 aa10.43□□□□□ -0.74
PNKP-217ENST00000625216 MRPS10P82664 201 aaKnown RBP10.43□□□□□ -0.74
PNKP-217ENST00000625216 IL13RA2Q14627 380 aa10.43□□□□□ -0.74
PNKP-217ENST00000625216 FAM189A2Q15884 450 aa10.43□□□□□ -0.74
PNKP-217ENST00000625216 CDNFQ49AH0 187 aa10.43□□□□□ -0.74
PNKP-217ENST00000625216 TRIQKQ629K1 86 aa10.43□□□□□ -0.74
PNKP-217ENST00000625216 Q8IYB0 196 aa10.43□□□□□ -0.74
PNKP-217ENST00000625216 GPX8Q8TED1 209 aa10.43□□□□□ -0.74
PNKP-217ENST00000625216 NUDCD2Q8WVJ2 157 aa10.43□□□□□ -0.74
PNKP-217ENST00000625216 ST8SIA4Q92187 359 aa10.43□□□□□ -0.74
PNKP-217ENST00000625216 SEH1LQ96EE3 360 aa10.43□□□□□ -0.74
PNKP-217ENST00000625216 ZNF48Q96MX3 618 aaPredicted RBP10.43□□□□□ -0.74
PNKP-217ENST00000625216 THAP7Q9BT49 309 aaPredicted RBP10.43□□□□□ -0.74
PNKP-217ENST00000625216 WDR13Q9H1Z4 485 aa10.43□□□□□ -0.74
PNKP-217ENST00000625216 PRDM13Q9H4Q3 707 aa10.43□□□□□ -0.74
PNKP-217ENST00000625216 RHOFQ9HBH0 211 aa10.43□□□□□ -0.74
PNKP-217ENST00000625216 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.43□□□□□ -0.74
PNKP-217ENST00000625216 TRAV40A0A0B4J280 105 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 MEIS3P1A6NDR6 274 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 FAM90A10PA6NDY2 464 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 FAM90A18PA6NE21 464 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 FAM90A16PA6NEW6 464 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 FAM90A20PA6NIJ5 464 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 FAM90A8PA6NJQ4 464 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 FAM90A7PA6NKC0 464 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 FAM90A22PA8MWA6 464 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 FAM90A12PA8MX19 464 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 FAM90A5PA8MXJ8 464 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 FAM90A23PA8MXZ1 464 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.42□□□□□ -0.74
PNKP-217ENST00000625216 SSX5O60225 188 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 PDCD6O75340 191 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 TOX4O94842 621 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 NXPH2O95156 264 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 GSTP1P09211 210 aaKnown RBP10.42□□□□□ -0.74
PNKP-217ENST00000625216 FAM90A15PP0C7V4 464 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 FAM90A13PP0C7W8 464 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 FAM90A14PP0C7W9 464 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 FAM90A24PP0C7X0 464 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 HKR1P10072 659 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 DUSP1P28562 367 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 PRSS3P35030 304 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 FOXL1Q12952 345 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 MPV17LQ2QL34 196 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 NKAPLQ5M9Q1 402 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 METTL11BQ5VVY1 283 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 ACP7Q6ZNF0 438 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 BTN2A1Q7KYR7 527 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 C6orf201Q7Z4U5 140 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 C3orf56Q8N813 242 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 C15orf40Q8WUR7 153 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 MED30Q96HR3 178 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 CCL13Q99616 98 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 SULT4A1Q9BR01 284 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 RCC2Q9P258 522 aaKnown RBP10.42□□□□□ -0.74
PNKP-217ENST00000625216 KLK11Q9UBX7 282 aa10.42□□□□□ -0.74
PNKP-217ENST00000625216 RBMX2Q9Y388 322 aaKnown RBP10.42□□□□□ -0.74
PNKP-217ENST00000625216 IGHV3OR15-7A0A075B7D8 119 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 IGHV3OR16-10A0A075B7F0 116 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 LINC00854A0A1B0GVQ3 168 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 DNAJC9-AS1A6NH13 148 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 VGLL3A8MV65 326 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 SULT1C2O00338 296 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 PLA2G10O15496 165 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 NDUFB3O43676 98 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 ORC5O43913 435 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 OR7C1O76099 320 aaPredicted RBP10.41□□□□□ -0.74
PNKP-217ENST00000625216 LPLP06858 475 aa10.41□□□□□ -0.74
PNKP-217ENST00000625216 RNASE1P07998 156 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms