RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 MRPL30Q8TCC3 161 aaKnown RBP7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 BSCL2Q96G97 398 aaPredicted RBP7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 ZNF488Q96MN9 340 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 SEC11CQ9BY50 192 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 TMEM231Q9H6L2 316 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 PLA2G2EQ9NZK7 142 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 LHX6Q9UPM6 363 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 RCL1Q9Y2P8 373 aaKnown RBP7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 RP1L1Q8IWN7 2480 aaPredicted RBP7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 IGKV1-6A0A0C4DH72 117 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 NKX2-6A6NCS4 301 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 J3QW42 95 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 CA6P23280 308 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 IL32P24001 234 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 F2RL1P55085 397 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 SWI5Q1ZZU3 235 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 P4HA3Q7Z4N8 544 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 SELENOHQ8IZQ5 122 aaKnown RBP7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 SPAG16Q8N0X2 631 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 DMBX1Q8NFW5 382 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 GMPPAQ96IJ6 420 aaPredicted RBP7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 SPIN2AQ99865 258 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 SPIN2BQ9BPZ2 258 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 USB1Q9BQ65 265 aaKnown RBP7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 OR51I2Q9H344 312 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 FAM212BQ9NTI7 297 aaPredicted RBP7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 ZDHHC8Q9ULC8 765 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 SHANK1Q9Y566 2161 aa7.1□□□□□ -1.27
SND1-IT1-201ENST00000623342 TRAV24A0A0B4J272 114 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 IGKV1D-13A0A0B4J2D9 117 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 J3QT63 122 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 HS3ST1O14792 307 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 SEC11BP0C7V7 166 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 IGKV1-13P0DP09 117 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 MUC1P15941 1255 aaPredicted RBP7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 CD82P27701 267 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 TNFSF10P50591 281 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 MRPL49Q13405 166 aaKnown RBP7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 SPATA46Q5T0L3 261 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 Q6ZRG5 221 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 TMPRSS7Q7RTY8 843 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 CMTM1Q8IZ96 169 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 CLRN3Q8NCR9 226 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 NRIP2Q9BQI9 281 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 GINS3Q9BRX5 216 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 TLNRD1Q9H1K6 362 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 IFT22Q9H7X7 185 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 WFDC1Q9HC57 220 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 FAM96BQ9Y3D0 163 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 DUXBA0A1W2PPF3 345 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 RNASEK-C17orf49H0YIS7 233 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 TOR1AO14656 332 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 HSD17B6O14756 317 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 SNAPINO95295 136 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 ZNF14P17017 642 aaPredicted RBP7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 SPINK2P20155 84 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 NKX2-1P43699 371 aaPredicted RBP7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 ZNF880Q6PDB4 577 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 C20orf204Q6ZNR8 217 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 C17orf78Q8N4C9 275 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 LYPD6BQ8NI32 183 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 RDH5Q92781 318 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 RTL8AQ9BWD3 113 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 CCL28Q9NRJ3 127 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 GLRX2Q9NS18 164 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 DLL3Q9NYJ7 618 aa7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 PURGQ9UJV8 347 aaKnown RBP7.09□□□□□ -1.27
SND1-IT1-201ENST00000623342 DEGS1O15121 323 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 RHBDL1O75783 438 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 CD5P06127 495 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 SPP1P10451 314 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 PVALBP20472 110 aaPredicted RBP7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 UCP1P25874 307 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 UBE2NP61088 152 aaKnown RBP7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 HLA-DRB3P79483 266 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 PMP22Q01453 160 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 NHLH2Q02577 135 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 TGFBR3Q03167 851 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 PCSK4Q6UW60 755 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 VASH2Q86V25 355 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 WNT2BQ93097 391 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 BOD1Q96IK1 185 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 ABHD14BQ96IU4 210 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 C11orf1Q9H5F2 150 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 LRP5LA4QPB2 252 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 CLEC18AA5D8T8 446 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 H0Y980 276 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 AGPAT2O15120 278 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 ADAM20O43506 726 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 SMPD2O60906 423 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 CELA3BP08861 270 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 DANCRP0C864 163 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 ZNF44P15621 663 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 S100GP29377 79 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 ID4P47928 161 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 PPP1CBP62140 327 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 EWSR1Q01844 656 aaKnown RBP eCLIP7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 ZNF324BQ6AW86 544 aaPredicted RBP7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 Q6P435 159 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 MYPOPQ86VE0 399 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms