RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 MALLQ13021 153 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 SLC10A1Q14973 349 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 CNN3Q15417 329 aaKnown RBP12.16□□□□□ -0.46
LDB3-209ENST00000623056 SHBQ15464 509 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 WDR25Q64LD2 544 aaPredicted RBP12.16□□□□□ -0.46
LDB3-209ENST00000623056 NFAM1Q8NET5 270 aaPredicted RBP12.16□□□□□ -0.46
LDB3-209ENST00000623056 SPTSSAQ969W0 71 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 BORCS8Q96FH0 119 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 TPSD1Q9BZJ3 242 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 METTL7AQ9H8H3 244 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 LOC102725191A0A1B0GVB3 256 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 A0A1B0GWJ7 208 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 XKRY2A2RUG3 117 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 GCGP01275 180 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 DRD1P21728 446 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 FGF8P55075 233 aaPredicted RBP12.15□□□□□ -0.46
LDB3-209ENST00000623056 P2RY6Q15077 328 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 ZNF726P1Q15940 193 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 DEFB133Q30KQ1 61 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 COA6Q5JTJ3 125 aaKnown RBP12.15□□□□□ -0.46
LDB3-209ENST00000623056 C10orf128Q5T292 105 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 TMEM211Q6ICI0 200 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 SLC25A24Q6NUK1 477 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 ZNF818PQ6ZRF7 136 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 HIST1H2AAQ96QV6 131 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 ATG101Q9BSB4 218 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 VSIRQ9H7M9 311 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 PLSCR2Q9NRY7 297 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 RNF115Q9Y4L5 304 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 IGLV3-32A0A0A0MS00 114 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 TRBV11-1A0A0K0K1C0 115 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 A0A1W2PPC4 97 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 IFNA5P01569 189 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 FOXL2NBQ6ZUU3 175 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 LHFPL2Q6ZUX7 228 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 SLC25A26Q70HW3 274 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 SSX7Q7RTT5 188 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 MAML2Q8IZL2 1156 aaPredicted RBP12.15□□□□□ -0.46
LDB3-209ENST00000623056 GAPTQ8N292 157 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 OR2M3Q8NG83 312 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 OR10G3Q8NGC4 313 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 OR2V1Q8NHB1 315 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 RSG1Q9BU20 258 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 ZNF442Q9H7R0 627 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 DCAF16Q9NXF7 216 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 TAAR3PQ9P1P4 343 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 CD207Q9UJ71 328 aa12.15□□□□□ -0.46
LDB3-209ENST00000623056 H3BP45 60 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 PFN1P07737 140 aaKnown RBP12.14□□□□□ -0.47
LDB3-209ENST00000623056 NR2C1P13056 603 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 TCN2P20062 427 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 VDAC1P21796 283 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 TNFRSF9Q07011 255 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 ANKRD37Q7Z713 158 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 TMEM54Q969K7 222 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 P2RX4Q99571 388 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 PYGO2Q9BRQ0 406 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 RBM24Q9BX46 236 aaKnown RBP12.14□□□□□ -0.47
LDB3-209ENST00000623056 P4HTMQ9NXG6 502 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 LAMP3Q9UQV4 416 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 DUXBA0A1W2PPF3 345 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 CEBPZOSA8MTT3 80 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 NPBWR2P48146 333 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 OR1D5P58170 312 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 TMEM267Q0VDI3 215 aaPredicted RBP12.14□□□□□ -0.47
LDB3-209ENST00000623056 C16orf82Q7Z2V1 217 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 WDR5BQ86VZ2 330 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 C17orf82Q86X59 251 aaPredicted RBP12.14□□□□□ -0.47
LDB3-209ENST00000623056 NECAP1Q8NC96 275 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 MBD3L1Q8WWY6 194 aa12.14□□□□□ -0.47
LDB3-209ENST00000623056 RBM14Q96PK6 669 aaKnown RBP12.14□□□□□ -0.47
LDB3-209ENST00000623056 ASXL3Q9C0F0 2248 aa12.13□□□□□ -0.47
LDB3-209ENST00000623056 TNFSF12O43508 249 aa12.13□□□□□ -0.47
LDB3-209ENST00000623056 TK1P04183 234 aa12.13□□□□□ -0.47
LDB3-209ENST00000623056 COX5BP10606 129 aa12.13□□□□□ -0.47
LDB3-209ENST00000623056 TUBG1P23258 451 aa12.13□□□□□ -0.47
LDB3-209ENST00000623056 UCP1P25874 307 aa12.13□□□□□ -0.47
LDB3-209ENST00000623056 ADIRFQ15847 76 aa12.13□□□□□ -0.47
LDB3-209ENST00000623056 FAM69BQ5VUD6 431 aa12.13□□□□□ -0.47
LDB3-209ENST00000623056 ZNF295-AS1Q8N0V1 137 aa12.13□□□□□ -0.47
LDB3-209ENST00000623056 ZNF385AQ96PM9 386 aaKnown RBP12.13□□□□□ -0.47
LDB3-209ENST00000623056 Q9N2K0 584 aa12.13□□□□□ -0.47
LDB3-209ENST00000623056 VAX2Q9UIW0 290 aa12.13□□□□□ -0.47
LDB3-209ENST00000623056 MMP17Q9ULZ9 603 aa12.13□□□□□ -0.47
LDB3-209ENST00000623056 DHHO43323 396 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 NRASP01111 189 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 GZMHP20718 246 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 CRYGSP22914 178 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 RBM11P57052 281 aaKnown RBP12.12□□□□□ -0.47
LDB3-209ENST00000623056 MRPS34P82930 218 aaKnown RBP12.12□□□□□ -0.47
LDB3-209ENST00000623056 ZNF66Q6ZN08 573 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 SNHG12Q9BXW3 62 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 IL36GQ9NZH8 169 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 CNTRLQ7Z7A1 2325 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 IGHV3-15A0A0B4J1V0 119 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 IGKV1D-13A0A0B4J2D9 117 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 OR7C1O76099 320 aaPredicted RBP12.12□□□□□ -0.47
LDB3-209ENST00000623056 OR4A8P0C604 315 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 IGKV1-13P0DP09 117 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 G0S2P27469 103 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms