RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 A0A1W2PP11 408 aa12.8□□□□□ -0.36
DDB2-216ENST00000622878 GEMIN2O14893 280 aaKnown RBP12.8□□□□□ -0.36
DDB2-216ENST00000622878 IL1AP01583 271 aa12.8□□□□□ -0.36
DDB2-216ENST00000622878 CSF1P09603 554 aa12.8□□□□□ -0.36
DDB2-216ENST00000622878 VSIG10L2P0DP72 767 aa12.8□□□□□ -0.36
DDB2-216ENST00000622878 TPTE2P1Q5T6R2 138 aa12.8□□□□□ -0.36
DDB2-216ENST00000622878 FAM110DQ8TAY7 271 aaPredicted RBP12.8□□□□□ -0.36
DDB2-216ENST00000622878 CREB3L1Q96BA8 519 aa12.8□□□□□ -0.36
DDB2-216ENST00000622878 OR14A2Q96R54 314 aa12.8□□□□□ -0.36
DDB2-216ENST00000622878 TOR1AO14656 332 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 PIN1P1O15428 100 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 ZNF780AO75290 641 aaPredicted RBP12.79□□□□□ -0.36
DDB2-216ENST00000622878 CD24P25063 80 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 GLP1RP43220 463 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 PRRX1P54821 245 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 WNT4P56705 351 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 TAS2R43P59537 309 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 AHSA2Q719I0 299 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 C16orf82Q7Z2V1 217 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 LINC00596Q86U02 117 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 NANOGP1Q8N7R0 232 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 BPIFB6Q8NFQ5 453 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 OR9G1Q8NH87 305 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 DERL3Q96Q80 235 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 OCSTAMPQ9BR26 566 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 MMP28Q9H239 520 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 LIN7BQ9HAP6 207 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 PAK1IP1Q9NWT1 392 aaPredicted RBP12.79□□□□□ -0.36
DDB2-216ENST00000622878 IDI2-AS1Q9NZ38 188 aa12.79□□□□□ -0.36
DDB2-216ENST00000622878 NKX1-2Q9UD57 310 aaPredicted RBP12.79□□□□□ -0.36
DDB2-216ENST00000622878 A0A1W2PPK0 400 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 OOSP1A8MZH6 123 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 J3QR06 171 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 OR7C1O76099 320 aaPredicted RBP12.78□□□□□ -0.36
DDB2-216ENST00000622878 CSTBP04080 98 aaKnown RBP12.78□□□□□ -0.36
DDB2-216ENST00000622878 CD28P10747 220 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 CELP19835 753 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 SERPINA2P20848 420 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 NFYBP25208 207 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 BRS3P32247 399 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 SSTR5P35346 364 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 CEACAM3P40198 252 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 MPV17LQ2QL34 196 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 PDLIM3Q53GG5 364 aaPredicted RBP12.78□□□□□ -0.36
DDB2-216ENST00000622878 RNLSQ5VYX0 342 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 CDH26Q8IXH8 852 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 OR10A7Q8NGE5 316 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 MRGPRDQ8TDS7 321 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 DCLRE1BQ9H816 532 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 CKLFQ9UBR5 152 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 PSG11Q9UQ72 335 aa12.78□□□□□ -0.36
DDB2-216ENST00000622878 PLXNB1O43157 2135 aa12.77□□□□□ -0.36
DDB2-216ENST00000622878 TRAV39A0A0B4J263 110 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 PNMA8CA0A1B0GUJ8 204 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 FAM90A18PA6NE21 464 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 FAM90A16PA6NEW6 464 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 FAM90A20PA6NIJ5 464 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 FAM90A9PA6NNJ1 464 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 ADARB2-AS1A8MUL3 147 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 FAM90A12PA8MX19 464 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 FAM90A5PA8MXJ8 464 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 AMY1AP04745 511 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 AMY2AP04746 511 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 FAM90A15PP0C7V4 464 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 FAM90A13PP0C7W8 464 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 FAM90A14PP0C7W9 464 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 FAM90A24PP0C7X0 464 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 GTF2F2P13984 249 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 TMEM95Q3KNT9 176 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 SLC22A6Q4U2R8 563 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 SLC16A12Q6ZSM3 486 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 STX19Q8N4C7 294 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 RFESDQ8TAC1 157 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 LEAP2Q969E1 77 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 RBM14Q96PK6 669 aaKnown RBP12.77□□□□□ -0.37
DDB2-216ENST00000622878 S100A13Q99584 98 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 PCDHB16Q9NRJ7 776 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 RCC2Q9P258 522 aaKnown RBP12.77□□□□□ -0.37
DDB2-216ENST00000622878 NOTCH3Q9UM47 2321 aa12.77□□□□□ -0.37
DDB2-216ENST00000622878 C15orf65H3BRN8 121 aa12.76□□□□□ -0.37
DDB2-216ENST00000622878 MYL12BO14950 172 aa12.76□□□□□ -0.37
DDB2-216ENST00000622878 FBXO24O75426 580 aa12.76□□□□□ -0.37
DDB2-216ENST00000622878 OR2F2O95006 317 aa12.76□□□□□ -0.37
DDB2-216ENST00000622878 IGHV3-7P01780 117 aa12.76□□□□□ -0.37
DDB2-216ENST00000622878 OPN1MWP04001 364 aa12.76□□□□□ -0.37
DDB2-216ENST00000622878 CDK1P06493 297 aa12.76□□□□□ -0.37
DDB2-216ENST00000622878 OPN1MW2P0DN77 364 aa12.76□□□□□ -0.37
DDB2-216ENST00000622878 OPN1MW3P0DN78 364 aa12.76□□□□□ -0.37
DDB2-216ENST00000622878 ARHGDIBP52566 201 aa12.76□□□□□ -0.37
DDB2-216ENST00000622878 GP2P55259 537 aaKnown RBP12.76□□□□□ -0.37
DDB2-216ENST00000622878 GPR176Q14439 515 aa12.76□□□□□ -0.37
DDB2-216ENST00000622878 RBM39Q14498 530 aaKnown RBP12.76□□□□□ -0.37
DDB2-216ENST00000622878 CCDC144NLQ6NUI1 221 aa12.76□□□□□ -0.37
DDB2-216ENST00000622878 GLIPR1L1Q6UWM5 242 aa12.76□□□□□ -0.37
DDB2-216ENST00000622878 ZNF497Q6ZNH5 498 aa12.76□□□□□ -0.37
DDB2-216ENST00000622878 NRG4Q8WWG1 115 aa12.76□□□□□ -0.37
DDB2-216ENST00000622878 MUL1Q969V5 352 aa12.76□□□□□ -0.37
DDB2-216ENST00000622878 MRPS24Q96EL2 167 aaKnown RBP12.76□□□□□ -0.37
DDB2-216ENST00000622878 OR5M11Q96RB7 305 aa12.76□□□□□ -0.37
DDB2-216ENST00000622878 SLC25A33Q9BSK2 321 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms