RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 ATP6V0CP27449 155 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 PPP1CCP36873 323 aaKnown RBP8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 FHITP49789 147 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 GNG3P63215 75 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 HLA-DRB3P79483 266 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 SRYQ05066 204 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 CLINT1Q14677 625 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 RHEBQ15382 184 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 OR8G1Q15617 311 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 OR1C1Q15619 314 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 TSC22D1Q15714 1073 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 CXorf66Q5JRM2 361 aaPredicted RBP8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 SPIN3Q5JUX0 258 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 CDCP2Q5VXM1 449 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 DPPA3Q6W0C5 159 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 C5orf24Q7Z6I8 188 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 ZNF573Q86YE8 665 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 ZNF561Q8N587 486 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 TMEM251Q8N6I4 163 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 TMEM105Q8N8V8 129 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 SUMF2Q8NBJ7 301 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 OR2G3Q8NGZ4 309 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 FAM213BQ8TBF2 198 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 BCL2L2Q92843 193 aaPredicted RBP8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 MALSU1Q96EH3 234 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 C14orf79Q96F83 325 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 EIF5A2Q9GZV4 153 aaKnown RBP8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 GLRX2Q9NS18 164 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 SHANK1Q9Y566 2161 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 ARHGAP21Q5T5U3 1957 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 TRAV24A0A0B4J272 114 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 A0A1B0GU03 582 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 ANKRD30BLA7E2S9 258 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 FAM166BA8MTA8 275 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 J3QT63 122 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 J3QW42 95 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 HSD17B6O14756 317 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 DEGS1O15121 323 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 SSSCA1O60232 199 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 C1QL1O75973 258 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 F10P00742 488 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 NGFP01138 241 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 SNRNP70P08621 437 aaKnown RBP8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 JMJD7P0C870 316 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 CCL2P13500 99 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 ZNF44P15621 663 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 AGAP20933 346 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 CCNOP22674 350 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 F2RP25116 425 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 S100GP29377 79 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 APLNRP35414 380 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 RPL35P42766 123 aaKnown RBP8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 MAGEA5P43359 124 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 PAX9P55771 341 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 C9orf135Q5VTT2 229 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 Q6P435 159 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 ETV3LQ6ZN32 361 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 NUFIP2Q7Z417 695 aaKnown RBP8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 CMTM1Q8IZ96 169 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 FAM58AQ8N1B3 248 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 BATF2Q8N1L9 274 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 IL22RA1Q8N6P7 574 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 OR1K1Q8NGR3 316 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 OR1J1Q8NGS3 322 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 NEK7Q8TDX7 302 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 SFT2D1Q8WV19 159 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 HES7Q9BYE0 225 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 OR51I2Q9H344 312 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 ZNF552Q9H707 407 aaPredicted RBP8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 GP6Q9HCN6 339 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 KCNJ16Q9NPI9 418 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 DLL3Q9NYJ7 618 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 TAAR3PQ9P1P4 343 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 IL36RNQ9UBH0 155 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 OR2W1Q9Y3N9 320 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 UNC80Q8N2C7 3258 aa8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 RANBP2P49792 3224 aaKnown RBP8.2□□□□□ -1.1
IGHV3-54-201ENST00000622166 TRAV1-1A0A0B4J248 108 aa8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 RBFOX3A6NFN3 312 aa8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 KIAA1324LA8MWY0 1029 aaPredicted RBP8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 TMEM50AO95807 157 aa8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 SP1P08047 785 aa8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 SRP19P09132 144 aaKnown RBP8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 MDH2P40926 338 aaKnown RBP8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 WNT5AP41221 380 aa8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 ASCL1P50553 236 aa8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 DYNLT3P51808 116 aa8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 AKR1D1P51857 326 aa8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 PLGLB1Q02325 96 aa8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 HIKESHIQ53FT3 197 aa8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 ZNF506Q5JVG8 444 aa8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 DCAF10Q5QP82 559 aa8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 MOB1BQ7L9L4 216 aa8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 MCEMP1Q8IX19 187 aa8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 SUMF1Q8NBK3 374 aa8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 MDS2Q8NDY4 140 aa8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 TMEM171Q8WVE6 324 aa8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 NANOS1Q8WY41 292 aaKnown RBP8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 LSM10Q969L4 123 aaKnown RBP8.19□□□□□ -1.1
IGHV3-54-201ENST00000622166 GPR146Q96CH1 333 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms