RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 THBDP07204 575 aa10.58□□□□□ -0.72
SCAMP1-207ENST00000621999 ANOS1P23352 680 aa10.58□□□□□ -0.72
SCAMP1-207ENST00000621999 ZNF260Q3ZCT1 412 aa10.58□□□□□ -0.72
SCAMP1-207ENST00000621999 MUC20Q8N307 709 aaPredicted RBP10.58□□□□□ -0.72
SCAMP1-207ENST00000621999 FAM216BQ8N7L0 139 aa10.58□□□□□ -0.72
SCAMP1-207ENST00000621999 THAP6Q8TBB0 222 aa10.58□□□□□ -0.72
SCAMP1-207ENST00000621999 EDARADDQ8WWZ3 215 aa10.58□□□□□ -0.72
SCAMP1-207ENST00000621999 FREM2Q5SZK8 3169 aa10.58□□□□□ -0.72
SCAMP1-207ENST00000621999 PCSK5Q92824 1860 aa10.58□□□□□ -0.72
SCAMP1-207ENST00000621999 ALX3O95076 343 aa10.58□□□□□ -0.72
SCAMP1-207ENST00000621999 TBPP20226 339 aa10.58□□□□□ -0.72
SCAMP1-207ENST00000621999 PMELP40967 661 aa10.58□□□□□ -0.72
SCAMP1-207ENST00000621999 ZNF672Q499Z4 452 aaPredicted RBP10.58□□□□□ -0.72
SCAMP1-207ENST00000621999 C1QTNF12Q5T7M4 302 aa10.58□□□□□ -0.72
SCAMP1-207ENST00000621999 GSG1LQ6UXU4 331 aa10.58□□□□□ -0.72
SCAMP1-207ENST00000621999 LYG1Q8N1E2 194 aa10.58□□□□□ -0.72
SCAMP1-207ENST00000621999 GAL3ST2Q9H3Q3 398 aa10.58□□□□□ -0.72
SCAMP1-207ENST00000621999 F8VVB4 439 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 F8VWA3 439 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 GZMHP20718 246 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 GLIPR1P48060 266 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 UBE2MP61081 183 aaKnown RBP10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 DMBX1Q8NFW5 382 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 ENY2Q9NPA8 101 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 PRELID3BQ9Y3B1 194 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 PRAF2O60831 178 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 IL3RAP26951 378 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 SSBP1Q04837 148 aaKnown RBP10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 GUSBP1Q15486 140 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 LINC00596Q86U02 117 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 POC1AQ8NBT0 407 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 GPX8Q8TED1 209 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 S1PR3Q99500 378 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 MALRD1Q5VYJ5 2156 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 TRDCB7Z8K6 153 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 ARRDC1Q8N5I2 433 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 NEU4Q8WWR8 484 aaPredicted RBP10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 SEC22AQ96IW7 307 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 PGA5P0DJD9 388 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 PSG2P11465 335 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 C22orf34Q6ZV56 151 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 CHPT1Q8WUD6 406 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 SNX22Q96L94 193 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 ALG5Q9Y673 324 aa10.57□□□□□ -0.72
SCAMP1-207ENST00000621999 KIAA1549Q9HCM3 1950 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 A0A1W2PPE3 182 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 FCGR3AP08637 254 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 CHATP28329 748 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 PIGPP57054 158 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 TMEM165Q9HC07 324 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 GCM1Q9NP62 436 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 ANKRD20A5PA0PJZ0 165 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 RNF212BA8MTL3 300 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 PVALBP20472 110 aaPredicted RBP10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 DNASE1P24855 282 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 PLA1AQ53H76 456 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 PLAC9Q5JTB6 97 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 HS3ST6Q96QI5 342 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 PCGF1Q9BSM1 259 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 A6NNC1 897 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 CA11O75493 328 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 PTBP3O95758 552 aaKnown RBP10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 MUC1P15941 1255 aaPredicted RBP10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 PDLIM4P50479 330 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 TMEM50BP56557 158 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 TMEM42Q69YG0 159 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 OR1S1Q8NH92 325 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 RTN4IP1Q8WWV3 396 aaPredicted RBP10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 RASL12Q9NYN1 266 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 RBMX2Q9Y388 322 aaKnown RBP10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 FAM96BQ9Y3D0 163 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 ATG12O94817 140 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 SCTP09683 121 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 IGSF11Q5DX21 431 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 BTNL3Q6UXE8 466 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 Q6ZR03 302 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 SSX9Q7RTT3 188 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 SLC25A28Q96A46 364 aa10.56□□□□□ -0.72
SCAMP1-207ENST00000621999 IFNL4K9M1U5 179 aa10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 MECP2P51608 486 aaKnown RBP10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 SP6Q3SY56 376 aa10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 ASPHD2Q6ICH7 369 aa10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 INO80EQ8NBZ0 244 aaPredicted RBP10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 OR10Z1Q8NGY1 313 aa10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 RPS4Y2Q8TD47 263 aa10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 PLEKHF2Q9H8W4 249 aa10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 ODAMA1E959 279 aa10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 M0R1X1 148 aa10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 HOXA4Q00056 320 aaPredicted RBP10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 OR4D10Q8NGI6 311 aa10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 OR2T35Q8NGX2 323 aa10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 LSM5Q9Y4Y9 91 aaKnown RBP10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 CTDSPLO15194 276 aa10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 NDUFA2O43678 99 aa10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 PPP1CCP36873 323 aaKnown RBP10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 CD200P41217 278 aa10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 BTG1P62324 171 aa10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 PIMREGQ9BSJ6 248 aa10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 TBC1D24Q9ULP9 559 aa10.55□□□□□ -0.72
SCAMP1-207ENST00000621999 KCNJ3P48549 501 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms