RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 MPIG6BO95866 241 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 SNRNP70P08621 437 aaKnown RBP9.07□□□□□ -0.96
CPNE3-210ENST00000621245 LIMS3P0CW19 117 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 LIMS4P0CW20 117 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 PF4V1P10720 104 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 GNG10P50151 68 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 RASSF2P50749 326 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 PAN3Q58A45 887 aaKnown RBP9.07□□□□□ -0.96
CPNE3-210ENST00000621245 RSBN1Q5VWQ0 802 aaPredicted RBP9.07□□□□□ -0.96
CPNE3-210ENST00000621245 MEDAGQ5VYS4 303 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 ZNF529Q6P280 563 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 C16orf82Q7Z2V1 217 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 CENPVQ7Z7K6 275 aaPredicted RBP9.07□□□□□ -0.96
CPNE3-210ENST00000621245 RTN4RL2Q86UN3 420 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 PARP16Q8N5Y8 322 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 WFDC9Q8NEX5 89 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 OR56B4Q8NH76 319 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 RHOXF1Q8NHV9 184 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 RFESDQ8TAC1 157 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 ZNF596Q8TC21 504 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 TSEN15Q8WW01 171 aaKnown RBP9.07□□□□□ -0.96
CPNE3-210ENST00000621245 CAPSLQ8WWF8 208 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 NOL4LQ96MY1 436 aaPredicted RBP9.07□□□□□ -0.96
CPNE3-210ENST00000621245 GLS2Q9UI32 602 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 LINC00527Q9UJ94 153 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 SIRT4Q9Y6E7 314 aaPredicted RBP9.07□□□□□ -0.96
CPNE3-210ENST00000621245 DNAH1Q9P2D7 4330 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 MEIKINA0A087WXM9 373 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 KBTBD11-OT1A0A1B0GTJ5 212 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 A0A1W2PP11 408 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 MAGEA13PA6NCF6 341 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 FAM90A18PA6NE21 464 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 FAM90A16PA6NEW6 464 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 FAM90A20PA6NIJ5 464 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 ZNF729A6NN14 1252 aaPredicted RBP9.06□□□□□ -0.96
CPNE3-210ENST00000621245 FAM90A9PA6NNJ1 464 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 FAM90A12PA8MX19 464 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 FAM90A5PA8MXJ8 464 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 TOR1AO14656 332 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 WBP4O75554 376 aaKnown RBP9.06□□□□□ -0.96
CPNE3-210ENST00000621245 CDRT1O95170 752 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 LALBAP00709 142 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 FAM90A15PP0C7V4 464 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 FAM90A13PP0C7W8 464 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 FAM90A14PP0C7W9 464 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 FAM90A24PP0C7X0 464 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 HOXD3P31249 432 aaPredicted RBP9.06□□□□□ -0.96
CPNE3-210ENST00000621245 LOXL3P58215 753 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 DOC2BQ14184 412 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 KHDC1LQ5JSQ8 128 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 OR52W1Q6IF63 320 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 C11orf87Q6NUJ2 197 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 ZNF329Q86UD4 541 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 SATL1Q86VE3 508 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 SYS1Q8N2H4 156 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 DRAM1Q8N682 238 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 OR4D6Q8NGJ1 314 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 OR5AK2Q8NH90 309 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 CNIH3Q8TBE1 160 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 MRGPRDQ8TDS7 321 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 TNFAIP8L1Q8WVP5 186 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 STMN2Q93045 179 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 FAM192AQ9GZU8 254 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 PRR13Q9NZ81 148 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 DHDHQ9UQ10 334 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 PSG11Q9UQ72 335 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 ZNF281Q9Y2X9 895 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 ORC6Q9Y5N6 252 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 TSSC4Q9Y5U2 329 aaPredicted RBP9.06□□□□□ -0.96
CPNE3-210ENST00000621245 CSMD3Q7Z407 3707 aa9.06□□□□□ -0.96
CPNE3-210ENST00000621245 LINC01548A6NM66 108 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 TMEM212A6NML5 194 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 J3QR06 171 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 IL1AP01583 271 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 ALDOBP05062 364 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 BRS3P32247 399 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 MTNR1BP49286 362 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 ETV1P50549 477 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 OR2G6Q5TZ20 316 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 ELP2Q6IA86 826 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 SERPINA12Q8IW75 414 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 C5orf56Q8N8D9 126 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 LINC00482Q8N8I6 264 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 DTX3Q8N9I9 347 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 CHST4Q8NCG5 386 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 OR9G1Q8NH87 305 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 TOMM40LQ969M1 308 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 JAM3Q9BX67 310 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 IDI2-AS1Q9NZ38 188 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 OR6C3Q9NZP0 311 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 MOB4Q9Y3A3 225 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 HSPE1-MOB4S4R3N1 261 aa9.05□□□□□ -0.96
CPNE3-210ENST00000621245 IGHV3-72A0A0B4J1Y9 119 aa9.04□□□□□ -0.96
CPNE3-210ENST00000621245 LOC100130705A0A1B0GUX0 176 aa9.04□□□□□ -0.96
CPNE3-210ENST00000621245 FUOMA2VDF0 154 aa9.04□□□□□ -0.96
CPNE3-210ENST00000621245 NPIPB11E5RHQ5 1161 aa9.04□□□□□ -0.96
CPNE3-210ENST00000621245 CLIC3O95833 236 aa9.04□□□□□ -0.96
CPNE3-210ENST00000621245 REG1BP48304 166 aa9.04□□□□□ -0.96
CPNE3-210ENST00000621245 HNF4GQ14541 408 aa9.04□□□□□ -0.96
CPNE3-210ENST00000621245 IL13RA2Q14627 380 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms