RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 KHDC1LQ5JSQ8 128 aa9.49□□□□□ -0.89
UPF3B-204ENST00000619445 C9orf152Q5JTZ5 239 aa9.49□□□□□ -0.89
UPF3B-204ENST00000619445 HIST2H2BDQ6DRA6 164 aa9.49□□□□□ -0.89
UPF3B-204ENST00000619445 RPL22L1Q6P5R6 122 aaKnown RBP9.49□□□□□ -0.89
UPF3B-204ENST00000619445 ASCL4Q6XD76 172 aa9.49□□□□□ -0.89
UPF3B-204ENST00000619445 TMPRSS11AQ6ZMR5 421 aa9.49□□□□□ -0.89
UPF3B-204ENST00000619445 OR10X1Q8NGY0 326 aa9.49□□□□□ -0.89
UPF3B-204ENST00000619445 RDH12Q96NR8 316 aa9.49□□□□□ -0.89
UPF3B-204ENST00000619445 NR1H4Q96RI1 486 aaPredicted RBP9.49□□□□□ -0.89
UPF3B-204ENST00000619445 PDCD1LG2Q9BQ51 273 aa9.49□□□□□ -0.89
UPF3B-204ENST00000619445 GON7Q9BXV9 100 aa9.49□□□□□ -0.89
UPF3B-204ENST00000619445 TMEM138Q9NPI0 162 aa9.49□□□□□ -0.89
UPF3B-204ENST00000619445 ZFP57Q9NU63 452 aa9.49□□□□□ -0.89
UPF3B-204ENST00000619445 ING3Q9NXR8 418 aa9.49□□□□□ -0.89
UPF3B-204ENST00000619445 TRAV24A0A0B4J272 114 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 LOC100130705A0A1B0GUX0 176 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 H3BNX3 289 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 AMY1AP04745 511 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 AMY2AP04746 511 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 IGLL1P15814 213 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 TMEM11P17152 192 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 IL3RAP26951 378 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 DCKP27707 260 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 GDNFP39905 211 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 GP2P55259 537 aaKnown RBP9.48□□□□□ -0.89
UPF3B-204ENST00000619445 MED21Q13503 144 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 GPR176Q14439 515 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 HES1Q14469 280 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 MPV17LQ2QL34 196 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 TMEM30BQ3MIR4 351 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 Q3ZCU0 254 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 TCTEX1D4Q5JR98 221 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 RSBN1Q5VWQ0 802 aaPredicted RBP9.48□□□□□ -0.89
UPF3B-204ENST00000619445 BAIAP2L2Q6UXY1 529 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 SATL1Q86VE3 508 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 FOXRED2Q8IWF2 684 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 C8orf31Q8N9H6 132 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 OR52M1Q8NGK5 317 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 FAM192AQ9GZU8 254 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 METTL9Q9H1A3 318 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 PPIL3Q9H2H8 161 aaKnown RBP9.48□□□□□ -0.89
UPF3B-204ENST00000619445 ISG20L2Q9H9L3 353 aaKnown RBP9.48□□□□□ -0.89
UPF3B-204ENST00000619445 SPACA1Q9HBV2 294 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 CKLFQ9UBR5 152 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 PSG11Q9UQ72 335 aa9.48□□□□□ -0.89
UPF3B-204ENST00000619445 TMEM30CPA0ZSE6 113 aa9.47□□□□□ -0.89
UPF3B-204ENST00000619445 CCRL2O00421 344 aa9.47□□□□□ -0.89
UPF3B-204ENST00000619445 GABRPO00591 440 aa9.47□□□□□ -0.89
UPF3B-204ENST00000619445 HSPB6O14558 160 aa9.47□□□□□ -0.89
UPF3B-204ENST00000619445 GAPDHP04406 335 aaKnown RBP9.47□□□□□ -0.89
UPF3B-204ENST00000619445 SNRNP70P08621 437 aaKnown RBP9.47□□□□□ -0.89
UPF3B-204ENST00000619445 ZSCAN26Q16670 478 aa9.47□□□□□ -0.89
UPF3B-204ENST00000619445 ZNF555Q8NEP9 628 aa9.47□□□□□ -0.89
UPF3B-204ENST00000619445 OR52I1Q8NGK6 324 aa9.47□□□□□ -0.89
UPF3B-204ENST00000619445 OR13A1Q8NGR1 328 aa9.47□□□□□ -0.89
UPF3B-204ENST00000619445 OR56B4Q8NH76 319 aa9.47□□□□□ -0.89
UPF3B-204ENST00000619445 TMEM106AQ96A25 262 aa9.47□□□□□ -0.89
UPF3B-204ENST00000619445 ZNF649Q9BS31 505 aa9.47□□□□□ -0.89
UPF3B-204ENST00000619445 DPCDQ9BVM2 203 aaPredicted RBP9.47□□□□□ -0.89
UPF3B-204ENST00000619445 FGF20Q9NP95 211 aaPredicted RBP9.47□□□□□ -0.89
UPF3B-204ENST00000619445 ST3GAL6Q9Y274 331 aa9.47□□□□□ -0.89
UPF3B-204ENST00000619445 DNAH3Q8TD57 4116 aa9.46□□□□□ -0.89
UPF3B-204ENST00000619445 A0A1W2PPI3 338 aa9.46□□□□□ -0.9
UPF3B-204ENST00000619445 SERPINE3A8MV23 424 aa9.46□□□□□ -0.9
UPF3B-204ENST00000619445 TXNL1O43396 289 aa9.46□□□□□ -0.9
UPF3B-204ENST00000619445 ORC5O43913 435 aa9.46□□□□□ -0.9
UPF3B-204ENST00000619445 OR7C1O76099 320 aaPredicted RBP9.46□□□□□ -0.9
UPF3B-204ENST00000619445 HTR3BO95264 441 aa9.46□□□□□ -0.9
UPF3B-204ENST00000619445 MYL12AP19105 171 aa9.46□□□□□ -0.9
UPF3B-204ENST00000619445 BDKRB2P30411 391 aa9.46□□□□□ -0.9
UPF3B-204ENST00000619445 ZNF93P35789 620 aaPredicted RBP9.46□□□□□ -0.9
UPF3B-204ENST00000619445 RBM11P57052 281 aaKnown RBP9.46□□□□□ -0.9
UPF3B-204ENST00000619445 ZNF816Q0VGE8 651 aaPredicted RBP9.46□□□□□ -0.9
UPF3B-204ENST00000619445 RNF144BQ7Z419 303 aa9.46□□□□□ -0.9
UPF3B-204ENST00000619445 STX19Q8N4C7 294 aa9.46□□□□□ -0.9
UPF3B-204ENST00000619445 LINC00311Q8N616 119 aa9.46□□□□□ -0.9
UPF3B-204ENST00000619445 DRAM1Q8N682 238 aa9.46□□□□□ -0.9
UPF3B-204ENST00000619445 C5orf56Q8N8D9 126 aa9.46□□□□□ -0.9
UPF3B-204ENST00000619445 OR8H1Q8NGG4 311 aa9.46□□□□□ -0.9
UPF3B-204ENST00000619445 OR51A2Q8NGJ7 313 aa9.46□□□□□ -0.9
UPF3B-204ENST00000619445 OR52N1Q8NH53 320 aa9.46□□□□□ -0.9
UPF3B-204ENST00000619445 MRGPRDQ8TDS7 321 aa9.46□□□□□ -0.9
UPF3B-204ENST00000619445 MRPS24Q96EL2 167 aaKnown RBP9.46□□□□□ -0.9
UPF3B-204ENST00000619445 AMBNQ9NP70 447 aa9.46□□□□□ -0.9
UPF3B-204ENST00000619445 CHCHD3Q9NX63 227 aaKnown RBP9.46□□□□□ -0.9
UPF3B-204ENST00000619445 E9PI62 339 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 AP4M1O00189 453 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 HSD17B6O14756 317 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 MPIG6BO95866 241 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 IGHG2P01859 326 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 LIMS3P0CW19 117 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 LIMS4P0CW20 117 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 GTF2F2P13984 249 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 SOX2P48431 317 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 RPL23AP62750 156 aaKnown RBP9.45□□□□□ -0.9
UPF3B-204ENST00000619445 EGFEM1PQ0D2K5 195 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 EBI3Q14213 229 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 PIGYQ3MUY2 71 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 DDI2Q5TDH0 399 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 TRAT1Q6PIZ9 186 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms