RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 S100A16Q96FQ6 103 aaKnown RBP18.67■□□□□ 0.58
CBWD3-213ENST00000618217 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.67■□□□□ 0.58
CBWD3-213ENST00000618217 LPAR3Q9UBY5 353 aa18.67■□□□□ 0.58
CBWD3-213ENST00000618217 LINC00312Q9Y6C7 94 aa18.67■□□□□ 0.58
CBWD3-213ENST00000618217 TMEM30CPA0ZSE6 113 aa18.66■□□□□ 0.58
CBWD3-213ENST00000618217 MEX3AA1L020 520 aaKnown RBP18.66■□□□□ 0.58
CBWD3-213ENST00000618217 GNB3P16520 340 aa18.66■□□□□ 0.58
CBWD3-213ENST00000618217 GATA3P23771 443 aa18.66■□□□□ 0.58
CBWD3-213ENST00000618217 DLX6P56179 175 aa18.66■□□□□ 0.58
CBWD3-213ENST00000618217 CR1LQ2VPA4 569 aa18.66■□□□□ 0.58
CBWD3-213ENST00000618217 DCAF12L2Q5VW00 463 aa18.66■□□□□ 0.58
CBWD3-213ENST00000618217 FAM185AQ8N0U4 392 aa18.66■□□□□ 0.58
CBWD3-213ENST00000618217 C6orf62Q9GZU0 229 aaPredicted RBP18.66■□□□□ 0.58
CBWD3-213ENST00000618217 ZMAT3Q9HA38 289 aaKnown RBP18.66■□□□□ 0.58
CBWD3-213ENST00000618217 AK3Q9UIJ7 227 aa18.66■□□□□ 0.58
CBWD3-213ENST00000618217 MEIKINA0A087WXM9 373 aa18.65■□□□□ 0.58
CBWD3-213ENST00000618217 A0A0G2JMP0 313 aa18.65■□□□□ 0.58
CBWD3-213ENST00000618217 A0A0X1KG70 313 aa18.65■□□□□ 0.58
CBWD3-213ENST00000618217 A0A1W2PQ09 198 aa18.65■□□□□ 0.58
CBWD3-213ENST00000618217 hADV38S2A0JD32 116 aa18.65■□□□□ 0.58
CBWD3-213ENST00000618217 XRCC3O43542 346 aa18.65■□□□□ 0.58
CBWD3-213ENST00000618217 NAPSAO96009 420 aa18.65■□□□□ 0.58
CBWD3-213ENST00000618217 CGB3P0DN86 165 aa18.65■□□□□ 0.58
CBWD3-213ENST00000618217 CGB7P0DN87 165 aa18.65■□□□□ 0.58
CBWD3-213ENST00000618217 CDNFQ49AH0 187 aa18.65■□□□□ 0.58
CBWD3-213ENST00000618217 Q6ZPA2 131 aa18.65■□□□□ 0.58
CBWD3-213ENST00000618217 C11orf42Q8N5U0 333 aa18.65■□□□□ 0.58
CBWD3-213ENST00000618217 OR4M2Q8NGB6 313 aa18.65■□□□□ 0.58
CBWD3-213ENST00000618217 DIABLOQ9NR28 239 aa18.65■□□□□ 0.58
CBWD3-213ENST00000618217 A3GALT2U3KPV4 340 aa18.65■□□□□ 0.58
CBWD3-213ENST00000618217 VGLL3A8MV65 326 aa18.64■□□□□ 0.57
CBWD3-213ENST00000618217 ZNF260Q3ZCT1 412 aa18.64■□□□□ 0.57
CBWD3-213ENST00000618217 BTNL3Q6UXE8 466 aa18.64■□□□□ 0.57
CBWD3-213ENST00000618217 KIR3DL3Q8N743 410 aa18.64■□□□□ 0.57
CBWD3-213ENST00000618217 OR13A1Q8NGR1 328 aa18.64■□□□□ 0.57
CBWD3-213ENST00000618217 MRPL30Q8TCC3 161 aaKnown RBP18.64■□□□□ 0.57
CBWD3-213ENST00000618217 TMPRSS13Q9BYE2 586 aa18.64■□□□□ 0.57
CBWD3-213ENST00000618217 MMP27Q9H306 513 aa18.64■□□□□ 0.57
CBWD3-213ENST00000618217 ELF5Q9UKW6 265 aaPredicted RBP18.64■□□□□ 0.57
CBWD3-213ENST00000618217 UBE2J1Q9Y385 318 aaPredicted RBP18.64■□□□□ 0.57
CBWD3-213ENST00000618217 TRAV18A0A075B6X5 111 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 TRAV39A0A0B4J263 110 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 SERPINE3A8MV23 424 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 CCL3L1P16619 93 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 ARF6P62330 175 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 LAX1Q8IWV1 398 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 Q8N7P7 452 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 OR6Q1Q8NGQ2 317 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 PHF21AQ96BD5 680 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 HDHD3Q9BSH5 251 aaPredicted RBP18.63■□□□□ 0.57
CBWD3-213ENST00000618217 SIRPDQ9H106 197 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 OR6C3Q9NZP0 311 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 OPN4Q9UHM6 478 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 J3QLI3 93 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 AVPP01185 164 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 GSTP1P09211 210 aaKnown RBP18.63■□□□□ 0.57
CBWD3-213ENST00000618217 ZNF728P0DKX0 622 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 MMP9P14780 707 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 ARL6IP1Q15041 203 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 FAHD2BQ6P2I3 314 aaPredicted RBP18.63■□□□□ 0.57
CBWD3-213ENST00000618217 C1orf122Q6ZSJ8 110 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 DTX3Q8N9I9 347 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 FAHD2AQ96GK7 314 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 GSX1Q9H4S2 264 aaPredicted RBP18.63■□□□□ 0.57
CBWD3-213ENST00000618217 KPTNQ9Y664 436 aa18.63■□□□□ 0.57
CBWD3-213ENST00000618217 SONP18583 2426 aaKnown RBP18.63■□□□□ 0.57
CBWD3-213ENST00000618217 TRGV10A0A0A0MS01 117 aa18.62■□□□□ 0.57
CBWD3-213ENST00000618217 TRBV6-6A0A0A6YYG2 114 aa18.62■□□□□ 0.57
CBWD3-213ENST00000618217 RGS5O15539 181 aa18.62■□□□□ 0.57
CBWD3-213ENST00000618217 MELTFP08582 738 aa18.62■□□□□ 0.57
CBWD3-213ENST00000618217 HACD4Q5VWC8 232 aa18.62■□□□□ 0.57
CBWD3-213ENST00000618217 ZNF880Q6PDB4 577 aa18.62■□□□□ 0.57
CBWD3-213ENST00000618217 C1orf229Q6ZS94 237 aaPredicted RBP18.62■□□□□ 0.57
CBWD3-213ENST00000618217 IZUMO1Q8IYV9 350 aa18.62■□□□□ 0.57
CBWD3-213ENST00000618217 OR4K15Q8NH41 348 aa18.62■□□□□ 0.57
CBWD3-213ENST00000618217 CCDC107Q8WV48 283 aa18.62■□□□□ 0.57
CBWD3-213ENST00000618217 ZNF714Q96N38 554 aa18.62■□□□□ 0.57
CBWD3-213ENST00000618217 C7orf69Q9H7B7 122 aa18.62■□□□□ 0.57
CBWD3-213ENST00000618217 LINC00574Q9H8X3 128 aa18.62■□□□□ 0.57
CBWD3-213ENST00000618217 MBNL3Q9NUK0 354 aaKnown RBP18.62■□□□□ 0.57
CBWD3-213ENST00000618217 TAS2R3Q9NYW6 316 aa18.62■□□□□ 0.57
CBWD3-213ENST00000618217 ONECUT1Q9UBC0 465 aa18.62■□□□□ 0.57
CBWD3-213ENST00000618217 TMEM235A6NFC5 223 aa18.61■□□□□ 0.57
CBWD3-213ENST00000618217 C17orf98A8MV24 154 aa18.61■□□□□ 0.57
CBWD3-213ENST00000618217 M0R1W7 72 aa18.61■□□□□ 0.57
CBWD3-213ENST00000618217 RCC1P18754 421 aaPredicted RBP18.61■□□□□ 0.57
CBWD3-213ENST00000618217 CLEC9AQ6UXN8 241 aa18.61■□□□□ 0.57
CBWD3-213ENST00000618217 LINC00299Q6ZSB3 139 aa18.61■□□□□ 0.57
CBWD3-213ENST00000618217 ZNF565Q8N9K5 539 aa18.61■□□□□ 0.57
CBWD3-213ENST00000618217 ZFAND2BQ8WV99 257 aa18.61■□□□□ 0.57
CBWD3-213ENST00000618217 WDFY2Q96P53 400 aa18.61■□□□□ 0.57
CBWD3-213ENST00000618217 RIMS4Q9H426 269 aaPredicted RBP18.61■□□□□ 0.57
CBWD3-213ENST00000618217 AUNIPQ9H7T9 357 aa18.61■□□□□ 0.57
CBWD3-213ENST00000618217 KCNS2Q9ULS6 477 aa18.61■□□□□ 0.57
CBWD3-213ENST00000618217 ERVFRD-1P60508 538 aa18.6■□□□□ 0.57
CBWD3-213ENST00000618217 C17orf58Q2M2W7 97 aa18.6■□□□□ 0.57
CBWD3-213ENST00000618217 TMEM69Q5SWH9 247 aa18.6■□□□□ 0.57
CBWD3-213ENST00000618217 TRAPPC6BQ86SZ2 158 aa18.6■□□□□ 0.57
CBWD3-213ENST00000618217 MRGPRDQ8TDS7 321 aa18.6■□□□□ 0.57
CBWD3-213ENST00000618217 CMSS1Q9BQ75 279 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms