RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 IGHV4-34P06331 123 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 METTL15P1P0C7V9 234 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 C9orf135Q5VTT2 229 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 IL22RA1Q8N6P7 574 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 EXTL1Q92935 676 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 MSI2Q96DH6 328 aaKnown RBP11.4□□□□□ -0.58
MSH6-214ENST00000616033 HIST1H2AAQ96QV6 131 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 UCN2Q96RP3 112 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 ASCL3Q9NQ33 180 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 SLC7A10Q9NS82 523 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 DHRS3O75911 302 aa11.4□□□□□ -0.59
MSH6-214ENST00000616033 CEACAM8P31997 349 aaPredicted RBP11.4□□□□□ -0.59
MSH6-214ENST00000616033 TLE4Q04727 773 aa11.4□□□□□ -0.59
MSH6-214ENST00000616033 HERPUD1Q15011 391 aa11.4□□□□□ -0.59
MSH6-214ENST00000616033 TEX38Q6PEX7 206 aa11.4□□□□□ -0.59
MSH6-214ENST00000616033 FAM89BQ8N5H3 189 aa11.4□□□□□ -0.59
MSH6-214ENST00000616033 OR4X1Q8NH49 305 aa11.4□□□□□ -0.59
MSH6-214ENST00000616033 ZNF385AQ96PM9 386 aaKnown RBP11.4□□□□□ -0.59
MSH6-214ENST00000616033 PLEKHF2Q9H8W4 249 aa11.4□□□□□ -0.59
MSH6-214ENST00000616033 ZNF286AQ9HBT8 521 aa11.4□□□□□ -0.59
MSH6-214ENST00000616033 ALKBH4Q9NXW9 302 aa11.4□□□□□ -0.59
MSH6-214ENST00000616033 FUT9Q9Y231 359 aa11.4□□□□□ -0.59
MSH6-214ENST00000616033 RBM7Q9Y580 266 aaKnown RBP11.4□□□□□ -0.59
MSH6-214ENST00000616033 R4GN57 208 aa11.4□□□□□ -0.59
MSH6-214ENST00000616033 AMBPP02760 352 aa11.39□□□□□ -0.59
MSH6-214ENST00000616033 POU2F2P09086 479 aa11.39□□□□□ -0.59
MSH6-214ENST00000616033 DEFA4P12838 97 aa11.39□□□□□ -0.59
MSH6-214ENST00000616033 IRF2P14316 349 aa11.39□□□□□ -0.59
MSH6-214ENST00000616033 OR3A1P47881 315 aa11.39□□□□□ -0.59
MSH6-214ENST00000616033 PHYHD1Q5SRE7 291 aa11.39□□□□□ -0.59
MSH6-214ENST00000616033 SMIM7Q9BQ49 75 aa11.39□□□□□ -0.59
MSH6-214ENST00000616033 PAM16Q9Y3D7 125 aa11.39□□□□□ -0.59
MSH6-214ENST00000616033 MUC22E2RYF6 1773 aaPredicted RBP11.39□□□□□ -0.59
MSH6-214ENST00000616033 IFNA5P01569 189 aa11.39□□□□□ -0.59
MSH6-214ENST00000616033 TNFSF10P50591 281 aa11.39□□□□□ -0.59
MSH6-214ENST00000616033 PAX5Q02548 391 aa11.39□□□□□ -0.59
MSH6-214ENST00000616033 GAPTQ8N292 157 aa11.39□□□□□ -0.59
MSH6-214ENST00000616033 SCGB1C1Q8TD33 95 aa11.39□□□□□ -0.59
MSH6-214ENST00000616033 YPEL4Q96NS1 127 aa11.39□□□□□ -0.59
MSH6-214ENST00000616033 PCGF1Q9BSM1 259 aa11.39□□□□□ -0.59
MSH6-214ENST00000616033 CD207Q9UJ71 328 aa11.39□□□□□ -0.59
MSH6-214ENST00000616033 EML6Q6ZMW3 1958 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 C9J4A7 227 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 MPPED1O15442 326 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 IGHMP01871 453 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 TNFRSF4P43489 277 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 H3F3AP84243 136 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 ARL6IP1Q15041 203 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 CLDND2Q8NHS1 167 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 IL22RA2Q969J5 263 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 GABRG3Q99928 467 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 RPRMQ9NS64 109 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 CYB5R3P00387 301 aaPredicted RBP11.38□□□□□ -0.59
MSH6-214ENST00000616033 PPYP01298 95 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 RPLP1P05386 114 aaKnown RBP11.38□□□□□ -0.59
MSH6-214ENST00000616033 HLA-BQ31612 363 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 OR8G2PQ6IF36 304 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 M1APQ8TC57 530 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 SDSLQ96GA7 329 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 Q96M66 194 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 ARV1Q9H2C2 271 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 CCL28Q9NRJ3 127 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 IGKV1-27A0A075B6S5 117 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 ANKUB1A6NFN9 424 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 TLX3O43711 291 aaPredicted RBP11.38□□□□□ -0.59
MSH6-214ENST00000616033 TRAF3IP2O43734 574 aaPredicted RBP11.38□□□□□ -0.59
MSH6-214ENST00000616033 EGR1P18146 543 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 PTTG1IPP53801 180 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 CCDC71LQ8N9Z2 235 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 SGCZQ96LD1 299 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 MRPL13Q9BYD1 178 aaKnown RBP11.38□□□□□ -0.59
MSH6-214ENST00000616033 MOB1AQ9H8S9 216 aa11.38□□□□□ -0.59
MSH6-214ENST00000616033 TMEM131Q92545 1883 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 SCTP09683 121 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 NPBWR2P48146 333 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 BLKP51451 505 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 CARD18P57730 90 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 MALLQ13021 153 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 RAET1LQ5VY80 246 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 PLCXD3Q63HM9 321 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 ZNF774Q6NX45 483 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 C16orf82Q7Z2V1 217 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 CALHM1Q8IU99 346 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 OR1L6Q8NGR2 347 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 ZNF576Q9H609 170 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 PNRC2Q9NPJ4 139 aaKnown RBP11.37□□□□□ -0.59
MSH6-214ENST00000616033 FBLN5Q9UBX5 448 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 ANAPC10Q9UM13 185 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 DOCK10Q96BY6 2186 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 ELOA3CA0A087WX78 387 aaPredicted RBP11.37□□□□□ -0.59
MSH6-214ENST00000616033 A0A1W2PQD3 144 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 NPIPA2E9PIF3 369 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 NPIPA3F8WFD2 350 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 IGHEP01854 428 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 CHRNA7P36544 502 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 TDGF1P3P51864 188 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 SUCLG1P53597 346 aaKnown RBP11.37□□□□□ -0.59
MSH6-214ENST00000616033 FAM3BP58499 235 aaPredicted RBP11.37□□□□□ -0.59
MSH6-214ENST00000616033 AARDQ4LEZ3 155 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 CRIP3Q6Q6R5 217 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms