RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 OR4A4PQ8NGN8 299 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 RPEQ96AT9 228 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 FAM210BQ96KR6 192 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 HES4Q9HCC6 221 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 SERTM2A0A1B0GWG4 89 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 FAM90A10PA6NDY2 464 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 FAM90A18PA6NE21 464 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 FAM90A16PA6NEW6 464 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 FAM90A20PA6NIJ5 464 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 FAM90A8PA6NJQ4 464 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 FAM90A7PA6NKC0 464 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 FAM90A22PA8MWA6 464 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 FAM90A12PA8MX19 464 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 FAM90A5PA8MXJ8 464 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 FAM90A23PA8MXZ1 464 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 J3QT63 122 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 HSBP1O75506 76 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 FAM90A15PP0C7V4 464 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 SEC11BP0C7V7 166 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 FAM90A13PP0C7W8 464 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 FAM90A14PP0C7W9 464 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 FAM90A24PP0C7X0 464 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 MMP9P14780 707 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 USF1P22415 310 aaPredicted RBP12.88□□□□□ -0.35
SNPH-203ENST00000614659 ALKBH6Q3KRA9 238 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 FAM24AA6NFZ4 105 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 OOEPA6NGQ2 149 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 ATXN7O15265 892 aaPredicted RBP12.87□□□□□ -0.35
SNPH-203ENST00000614659 OVCH2Q7RTZ1 564 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 ZNF519Q8TB69 540 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 CCL17Q92583 94 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 TMEM56Q96MV1 263 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 WFDC6Q9BQY6 131 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 BARX1Q9HBU1 254 aaPredicted RBP12.87□□□□□ -0.35
SNPH-203ENST00000614659 OR6C3Q9NZP0 311 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 CACNG5Q9UF02 275 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 MRPS18BQ9Y676 258 aaKnown RBP12.87□□□□□ -0.35
SNPH-203ENST00000614659 MAP1LC3B2A6NCE7 125 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 M0R1X1 148 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 RPS4XP62701 263 aaKnown RBP12.87□□□□□ -0.35
SNPH-203ENST00000614659 TMEM37Q8WXS4 190 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 MAP1LC3BQ9GZQ8 125 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 DHRS7CA6NNS2 312 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 ADAP1O75689 374 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 PPYP01298 95 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 CTSSP25774 331 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 ETFRF1Q6IPR1 90 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 SLC25A47Q6Q0C1 308 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 RFLNBQ8N5W9 214 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 PDCD11Q14690 1871 aaKnown RBP12.87□□□□□ -0.35
SNPH-203ENST00000614659 PMCHP20382 165 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 TMEM267Q0VDI3 215 aaPredicted RBP12.87□□□□□ -0.35
SNPH-203ENST00000614659 SMUG1Q53HV7 270 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 FFAR4Q5NUL3 377 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 CLEC2AQ6UVW9 174 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 SEZ6L2Q6UXD5 910 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 ABHD14BQ96IU4 210 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 KCNE5Q9UJ90 142 aa12.87□□□□□ -0.35
SNPH-203ENST00000614659 A0A1B0GU03 582 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 COX7A2P2O60397 106 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 CNN1P51911 297 aaKnown RBP12.86□□□□□ -0.35
SNPH-203ENST00000614659 TMEM241Q24JQ0 296 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 TCTEX1D1Q8N7M0 179 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 LRRC29Q8WV35 223 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 RNF2Q99496 336 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 WDR13Q9H1Z4 485 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 ERVFC1-1P60608 527 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 RPL11P62913 178 aaKnown RBP12.86□□□□□ -0.35
SNPH-203ENST00000614659 HLA-DRB3P79483 266 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 HEXA-AS1Q9H8Q6 139 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 TMEM74BQ9NUR3 256 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 RBFOX3A6NFN3 312 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 MFNGO00587 321 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 FBP1P09467 338 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 PGA4P0DJD7 388 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 ZNF260Q3ZCT1 412 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 MOB3BQ86TA1 216 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 TMEM104Q8NE00 496 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 LHFPL5Q8TAF8 219 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 AQP3Q92482 292 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 MARVELD3Q96A59 401 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 SLC25A38Q96DW6 304 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 MS4A10Q96PG2 267 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 SLC45A2Q9UMX9 530 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 PRR19A6NJB7 356 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 VSIG10L2P0DP72 767 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 Q3ZCU0 254 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 FAM219AQ8IW50 185 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 SAP30LQ9HAJ7 183 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 KCNMB2Q9Y691 235 aa12.86□□□□□ -0.35
SNPH-203ENST00000614659 TRPM6Q9BX84 2022 aa12.85□□□□□ -0.35
SNPH-203ENST00000614659 SH2D7A6NKC9 451 aaPredicted RBP12.85□□□□□ -0.35
SNPH-203ENST00000614659 DBX1A6NMT0 343 aa12.85□□□□□ -0.35
SNPH-203ENST00000614659 GAPDHP04406 335 aaKnown RBP12.85□□□□□ -0.35
SNPH-203ENST00000614659 GABRA6Q16445 453 aa12.85□□□□□ -0.35
SNPH-203ENST00000614659 NOL4LQ96MY1 436 aaPredicted RBP12.85□□□□□ -0.35
SNPH-203ENST00000614659 M0R143 59 aa12.85□□□□□ -0.35
SNPH-203ENST00000614659 GEMIN2O14893 280 aaKnown RBP12.85□□□□□ -0.35
SNPH-203ENST00000614659 NAT2P11245 290 aa12.85□□□□□ -0.35
SNPH-203ENST00000614659 TMEM11P17152 192 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms