RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 IGHV2-70P01814 119 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 PAX1P15863 534 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 AMY2BP19961 511 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 COL8A2P25067 703 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 RBMXP38159 391 aaKnown RBP9.52□□□□□ -0.89
SLIRP-212ENST00000613856 TAS2R19P59542 299 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 ANK2Q01484 3957 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 ZMYND11Q15326 602 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 ZNF57Q68EA5 555 aaPredicted RBP9.52□□□□□ -0.89
SLIRP-212ENST00000613856 SFRP4Q6FHJ7 346 aaPredicted RBP9.52□□□□□ -0.89
SLIRP-212ENST00000613856 BRICD5Q6PL45 260 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 ZNF497Q6ZNH5 498 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 C17orf107Q6ZR85 190 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 MOB1BQ7L9L4 216 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 NEK7Q8TDX7 302 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 TMEM158Q8WZ71 300 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 DYRK2Q92630 601 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 GAFA1Q96PS6 74 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 HDHD3Q9BSH5 251 aaPredicted RBP9.52□□□□□ -0.89
SLIRP-212ENST00000613856 FAM234AQ9H0X4 552 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 PPA2Q9H2U2 334 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 ZNF665Q9H7R5 613 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 TMEM165Q9HC07 324 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 YAE1D1Q9NRH1 226 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 ZNF701Q9NV72 531 aaPredicted RBP9.52□□□□□ -0.89
SLIRP-212ENST00000613856 KAAG1Q9UBP8 84 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 METRNQ9UJH8 293 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 MEIS3P1A6NDR6 274 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 NAP1L6A6NFF2 107 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 K7N7A8 449 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 HSPB6O14558 160 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 MGST3O14880 152 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 PLA2G10O15496 165 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 PTTG1O95997 202 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 GYPAP02724 150 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 CD74P04233 296 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 GABRA2P47869 451 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 ATP5J2P56134 94 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 IL13RA1P78552 427 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 RGS21Q2M5E4 152 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 ACTBL2Q562R1 376 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 RSBN1Q5VWQ0 802 aaPredicted RBP9.51□□□□□ -0.89
SLIRP-212ENST00000613856 SLC35E4Q6ICL7 350 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 ZNF880Q6PDB4 577 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 Q6ZPA2 131 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 DCDC5Q6ZRR9 648 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 PEG10Q86TG7 708 aaKnown RBP9.51□□□□□ -0.89
SLIRP-212ENST00000613856 MUC20Q8N307 709 aaPredicted RBP9.51□□□□□ -0.89
SLIRP-212ENST00000613856 BPIFB2Q8N4F0 458 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 GVQW1Q8N7I0 195 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 ASCC1Q8N9N2 400 aaKnown RBP9.51□□□□□ -0.89
SLIRP-212ENST00000613856 OR4S1Q8NGB4 309 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 OR5T2Q8NGG2 359 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 PLPPR1Q8TBJ4 325 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 MRPL30Q8TCC3 161 aaKnown RBP9.51□□□□□ -0.89
SLIRP-212ENST00000613856 SNAPC3Q92966 411 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 TIMD4Q96H15 378 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 SHARPINQ9H0F6 387 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 NCOR1P1Q9H4R4 102 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 MGAT4AQ9UM21 535 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 MAB21L2Q9Y586 359 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.51□□□□□ -0.894e-15■■■■■ 30.4
SLIRP-212ENST00000613856 SVEP1Q4LDE5 3571 aa9.51□□□□□ -0.89
SLIRP-212ENST00000613856 TMEM30CPA0ZSE6 113 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 CENPXA8MT69 81 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 ZNF736B4DX44 427 aaPredicted RBP9.5□□□□□ -0.89
SLIRP-212ENST00000613856 LYNX1G3V0Z9 82 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 LYRM1O43325 122 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 ZNF205O95201 554 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 TFF1P04155 84 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 TK1P04183 234 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 AKAIN1P0CW23 69 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 LYNX1P0DP58 116 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 ERP29P30040 261 aaKnown RBP9.5□□□□□ -0.89
SLIRP-212ENST00000613856 FAUP35544 74 aaKnown RBP9.5□□□□□ -0.89
SLIRP-212ENST00000613856 TMEM33P57088 247 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 TAS2R46P59540 309 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 ATXN7L3Q14CW9 347 aaPredicted RBP9.5□□□□□ -0.89
SLIRP-212ENST00000613856 GRK1Q15835 563 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 TMEM155Q4W5P6 130 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 MZT2BQ6NZ67 158 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 SLC36A1Q7Z2H8 476 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 POC5Q8NA72 575 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 MINDY2Q8NBR6 621 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 DEFB108BQ8NET1 73 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 BEST4Q8NFU0 473 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 OR5D13Q8NGL4 314 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 RAB1CQ92928 201 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 COQ2Q96H96 371 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 MED30Q96HR3 178 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 TMEM246Q9BRR3 403 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 C11orf54Q9H0W9 315 aaPredicted RBP9.5□□□□□ -0.89
SLIRP-212ENST00000613856 ZNF286AQ9HBT8 521 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 BARX1Q9HBU1 254 aaPredicted RBP9.5□□□□□ -0.89
SLIRP-212ENST00000613856 CHMP1AQ9HD42 196 aaPredicted RBP9.5□□□□□ -0.89
SLIRP-212ENST00000613856 Q9N2K0 584 aa9.5□□□□□ -0.89
SLIRP-212ENST00000613856 MBNL3Q9NUK0 354 aaKnown RBP9.5□□□□□ -0.89
SLIRP-212ENST00000613856 DOCK11Q5JSL3 2073 aa9.49□□□□□ -0.89
SLIRP-212ENST00000613856 KIR2DS1A0A191URI9 304 aa9.49□□□□□ -0.89
SLIRP-212ENST00000613856 FUOMA2VDF0 154 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms