RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 TENM4Q6N022 2769 aa11.5□□□□□ -0.57
TMEM254-213ENST00000613758 HELZ2Q9BYK8 2649 aaKnown RBP11.49□□□□□ -0.57
TMEM254-213ENST00000613758 DOPEY2Q9Y3R5 2298 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 UTP20O75691 2785 aaKnown RBP11.49□□□□□ -0.57
TMEM254-213ENST00000613758 DISC1C4P0D8 188 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 PRAF2O60831 178 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 ZNF737O75373 536 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 IL5P05113 134 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 CBX3Q13185 183 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 FCN2Q15485 313 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 ATPAF1Q5TC12 328 aaPredicted RBP11.49□□□□□ -0.57
TMEM254-213ENST00000613758 SHEQ5VZ18 495 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 ZNF787Q6DD87 383 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 GLDNQ6ZMI3 551 aaPredicted RBP11.49□□□□□ -0.57
TMEM254-213ENST00000613758 ZNF788Q6ZQV5 615 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 ZNF561Q8N587 486 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 PLPPR1Q8TBJ4 325 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 NRGNQ92686 78 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 SNX22Q96L94 193 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 FYTTD1Q96QD9 318 aaKnown RBP11.49□□□□□ -0.57
TMEM254-213ENST00000613758 SHARPINQ9H0F6 387 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 ZNF665Q9H7R5 613 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 CHMP1AQ9HD42 196 aaPredicted RBP11.49□□□□□ -0.57
TMEM254-213ENST00000613758 RANGRFQ9HD47 186 aaPredicted RBP11.49□□□□□ -0.57
TMEM254-213ENST00000613758 MYOZ1Q9NP98 299 aaPredicted RBP11.49□□□□□ -0.57
TMEM254-213ENST00000613758 C12orf4Q9NQ89 552 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 ING3Q9NXR8 418 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 SCP2D1Q9UJQ7 156 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 MAB21L2Q9Y586 359 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 USF3Q68DE3 2245 aa11.49□□□□□ -0.57
TMEM254-213ENST00000613758 DTYMKP23919 212 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 MDH2P40926 338 aaKnown RBP11.48□□□□□ -0.57
TMEM254-213ENST00000613758 OR3A1P47881 315 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 EIF2B2P49770 351 aaKnown RBP11.48□□□□□ -0.57
TMEM254-213ENST00000613758 ATXN7L3Q14CW9 347 aaPredicted RBP11.48□□□□□ -0.57
TMEM254-213ENST00000613758 VAX1Q5SQQ9 334 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 HIST2H2BCQ6DN03 193 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 ZNRF1Q8ND25 227 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 GAFA1Q96PS6 74 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 SLC25A21Q9BQT8 299 aaPredicted RBP11.48□□□□□ -0.57
TMEM254-213ENST00000613758 SEC22CQ9BRL7 303 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 RIMS4Q9H426 269 aaPredicted RBP11.48□□□□□ -0.57
TMEM254-213ENST00000613758 CHODLQ9H9P2 273 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 ZNF701Q9NV72 531 aaPredicted RBP11.48□□□□□ -0.57
TMEM254-213ENST00000613758 TNFRSF13BO14836 293 aaPredicted RBP11.48□□□□□ -0.57
TMEM254-213ENST00000613758 FSTL3O95633 263 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 NAPSAO96009 420 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 FCGR3AP08637 254 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 TMEM33P57088 247 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 CD83Q01151 205 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 GRK1Q15835 563 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 KCNJ8Q15842 424 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 SCGB2B2Q4G0G5 96 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 Q6ZPA2 131 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 OR11H7Q8NGC8 314 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 PPP1R35Q8TAP8 253 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 RAB1CQ92928 201 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 MED30Q96HR3 178 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 PRRT1Q99946 306 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 TMEM246Q9BRR3 403 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 DNTTIP1Q9H147 329 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 LRBAP50851 2863 aa11.48□□□□□ -0.57
TMEM254-213ENST00000613758 A0A1B0GW55 424 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 NKX6-3A6NJ46 265 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 K7N7A8 449 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 SIGLEC5O15389 551 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 PPIHO43447 177 aaKnown RBP11.47□□□□□ -0.57
TMEM254-213ENST00000613758 NDUFA2O43678 99 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 IGHV2-70P01814 119 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 IGHV4-39P01824 125 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 TK1P04183 234 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 DUX4L2P0CJ85 424 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 DUX4L3P0CJ86 424 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 DUX4L4P0CJ87 422 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 DUX4L5P0CJ88 424 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 DUX4L6P0CJ89 424 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 DUX4L7P0CJ90 424 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 KCNJ3P48549 501 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 KRTAP10-9P60411 292 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 IL13RA1P78552 427 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 ACTBL2Q562R1 376 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 AVPI1Q5T686 147 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 METTL11BQ5VVY1 283 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 CD276Q5ZPR3 534 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 DUX4L9Q6RFH8 374 aaPredicted RBP11.47□□□□□ -0.57
TMEM254-213ENST00000613758 ZNF497Q6ZNH5 498 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 DRAXINQ8NBI3 349 aaPredicted RBP11.47□□□□□ -0.57
TMEM254-213ENST00000613758 TIMD4Q96H15 378 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 MED28Q9H204 178 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 DUX4Q9UBX2 424 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 VSIG4Q9Y279 399 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 AKAP6Q13023 2319 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 TMPRSS2O15393 492 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 SELLP14151 372 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 AESQ08117 197 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 LYPD2Q6UXB3 125 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 FAM216BQ8N7L0 139 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 OR52B4Q8NGK2 314 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 OR5D13Q8NGL4 314 aa11.47□□□□□ -0.57
TMEM254-213ENST00000613758 MRPL30Q8TCC3 161 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms