RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ARR3P36575 388 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 SOX8P57073 446 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 RNPS1Q15287 305 aaKnown RBP12□□□□□ -0.49
PCDHGA3-202ENST00000612467 FBXW9Q5XUX1 488 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 LINC00518Q8N0U6 118 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 OR10Z1Q8NGY1 313 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 KIRREL1Q96J84 757 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 TECTBQ96PL2 329 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 E5RGE8 158 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 SSSCA1O60232 199 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 TK1P04183 234 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 KCNJ3P48549 501 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 ZNF616Q08AN1 781 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 ZNF565Q8N9K5 539 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 Q8NFD4 153 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 OR51H1Q8NH63 302 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 SYT3Q9BQG1 590 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 RCC2Q9P258 522 aaKnown RBP11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 GLS2Q9UI32 602 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 FZR1Q9UM11 496 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 NSG2Q9Y328 171 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 ATMQ13315 3056 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 ZFHX2Q9C0A1 2572 aaPredicted RBP11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 A0A0G2JRQ6 117 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 GLAP06280 429 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 EPHA1P21709 976 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 SULT1A2P50226 295 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 CAV2P51636 162 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 UQCC3Q6UW78 93 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 P4HA3Q7Z4N8 544 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 FDCSPQ8NFU4 85 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 OR5A2Q8NGI9 324 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 NRIP2Q9BQI9 281 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 ABHD14AQ9BUJ0 271 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 TMEM222Q9H0R3 208 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 PCDHB16Q9NRJ7 776 aa11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 INTS1Q8N201 2190 aaKnown RBP11.99□□□□□ -0.49
PCDHGA3-202ENST00000612467 PROB1E7EW31 1015 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 PCSK4Q6UW60 755 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 BTNL8Q6UX41 500 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 ZNF695Q8IW36 515 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 SELENOHQ8IZQ5 122 aaKnown RBP11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 OR4D5Q8NGN0 318 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 DLL3Q9NYJ7 618 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 ATPIF1Q9UII2 106 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 IGSF23A1L1A6 192 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 CDIPTO14735 213 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 ST8SIA3O43173 380 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 CST7O76096 145 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 TMEM50AO95807 157 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 SFTA3P0C7M3 94 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 IGHV1-2P23083 117 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 UCP3P55916 312 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 B2MP61769 119 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 FAM58AQ8N1B3 248 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 TMEM217Q8N7C4 229 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 LRTM2Q8N967 370 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 CNEP1R1Q8N9A8 125 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 CCDC71LQ8N9Z2 235 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 TRIB1Q96RU8 372 aa11.98□□□□□ -0.49
PCDHGA3-202ENST00000612467 TRDCB7Z8K6 153 aa11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 RNASEK-C17orf49H0YIS7 233 aa11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 H3BP45 60 aa11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 TAAR5O14804 337 aa11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 JTBO76095 146 aa11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 COX5BP10606 129 aa11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 MIDNQ504T8 468 aa11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 ALKBH2Q6NS38 261 aa11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 PLPPR1Q8TBJ4 325 aa11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 GRPP07492 148 aa11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 ZNF806P0C7X5 589 aa11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 TMEM182Q6ZP80 229 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 ZNF826PQ6ZT77 177 aa11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 AKR1E2Q96JD6 320 aa11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 OR51I2Q9H344 312 aa11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 PARD6AQ9NPB6 346 aa11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 ERRFI1Q9UJM3 462 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 ATP23Q9Y6H3 246 aa11.97□□□□□ -0.49
PCDHGA3-202ENST00000612467 GPR137BO60478 399 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 SLC34A2O95436 690 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 TNFSF10P50591 281 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 PPT1P50897 306 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 GNG3P63215 75 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 EWSR1Q01844 656 aaKnown RBP eCLIP11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 SVBPQ8N300 66 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 TMEM171Q8WVE6 324 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 SAV1Q9H4B6 383 aaPredicted RBP11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 GP6Q9HCN6 339 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 HEATR1Q9H583 2144 aaKnown RBP11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 MPV17P39210 176 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 PLA2G5P39877 138 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 SWI5Q1ZZU3 235 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 VWA1Q6PCB0 445 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 ODF3L1Q8IXM7 274 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 SCCPDHQ8NBX0 429 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 CLRN3Q8NCR9 226 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 SLC25A40Q8TBP6 338 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 LOXL4Q96JB6 756 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 RNF122Q9H9V4 155 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 PLEKHA2Q9HB19 425 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms