RNA–Protein interactions for RNA: ENST00000612223.4

SYNRG-217, Transcript of synergin gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNRG, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-217ENST00000612223 LAMTOR1Q6IAA8 161 aa12.59□□□□□ -0.39
SYNRG-217ENST00000612223 C19orf35Q6ZS72 473 aa12.59□□□□□ -0.39
SYNRG-217ENST00000612223 OR51B2Q9Y5P1 312 aa12.59□□□□□ -0.39
SYNRG-217ENST00000612223 MIDNQ504T8 468 aa12.59□□□□□ -0.39
SYNRG-217ENST00000612223 ZDHHC22Q8N966 263 aa12.59□□□□□ -0.39
SYNRG-217ENST00000612223 DYNLT3P51808 116 aa12.58□□□□□ -0.39
SYNRG-217ENST00000612223 C11orf87Q6NUJ2 197 aa12.58□□□□□ -0.39
SYNRG-217ENST00000612223 OR4B1Q8NGF8 309 aa12.58□□□□□ -0.39
SYNRG-217ENST00000612223 UPK3AO75631 287 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 BHLHA9Q7RTU4 235 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 OR1L8Q8NGR8 309 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 SMIM4Q8WVI0 70 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 NXF2Q9GZY0 626 aaKnown RBP12.58□□□□□ -0.4
SYNRG-217ENST00000612223 SIRT7Q9NRC8 400 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 SYNGR1O43759 233 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 CTAG2O75638 210 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 ARF6P62330 175 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 FAM78BQ5VT40 261 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 AMMECR1LQ6DCA0 310 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 GAPTQ8N292 157 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 CCL28Q9NRJ3 127 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 ECM29Q5VYK3 1845 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 C1QBP02746 253 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 DCAF12L2Q5VW00 463 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 EIF4E3Q8N5X7 224 aaKnown RBP12.58□□□□□ -0.4
SYNRG-217ENST00000612223 RNF122Q9H9V4 155 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 TTC3P53804 2025 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 OR5A2Q8NGI9 324 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 K7N7A8 449 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 POLR2GP62487 172 aaKnown RBP eCLIP12.58□□□□□ -0.4
SYNRG-217ENST00000612223 PPP1R1AQ13522 171 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 VAMP3Q15836 100 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 DTD1Q8TEA8 209 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 NTNG2Q96CW9 530 aa12.58□□□□□ -0.4
SYNRG-217ENST00000612223 MOSPD3O75425 235 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 FCARP24071 287 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 LGALSLQ3ZCW2 172 aaPredicted RBP12.57□□□□□ -0.4
SYNRG-217ENST00000612223 CDCP2Q5VXM1 449 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 SLC25A45Q8N413 288 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 ZNF738Q8NE65 137 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 SAP25Q8TEE9 199 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 SNX22Q96L94 193 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 SLC17A5Q9NRA2 495 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 A0A0J9YW62 118 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 LOC105371242A0A075B767 164 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 SOCS1O15524 211 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 RAB32Q13637 225 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 CSRP2Q16527 193 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 C19orf54Q5BKX5 351 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 SPANXN1Q5VSR9 72 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 TMEM18Q96B42 140 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 SRD5A3Q9H8P0 318 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 TNRC6CQ9HCJ0 1690 aaKnown RBP12.57□□□□□ -0.4
SYNRG-217ENST00000612223 FOXJ2Q9P0K8 574 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 STXBP6Q8NFX7 210 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 OR10J6PQ8NGY7 276 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 ZNF831Q5JPB2 1677 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 C9orf170A2RU37 121 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 CDC42EP2O14613 210 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 P2RY6Q15077 328 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 ATP6V1FQ16864 119 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 SLC25A53Q5H9E4 307 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 VWA1Q6PCB0 445 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 ZNF841Q6ZN19 808 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 DOCK1Q14185 1865 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 TMEM229AB2RXF0 380 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 ICMTO60725 284 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 PEBP1P30086 187 aaKnown RBP12.57□□□□□ -0.4
SYNRG-217ENST00000612223 HLA-DRB3P79483 266 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 MS4A3Q96HJ5 214 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 TIMP4Q99727 224 aa12.57□□□□□ -0.4
SYNRG-217ENST00000612223 TMEFF2Q9UIK5 374 aaPredicted RBP12.57□□□□□ -0.4
SYNRG-217ENST00000612223 TCL1AP56279 114 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 TMEM167BQ9NRX6 74 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 TMEM74BQ9NUR3 256 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 MRM2Q9UI43 246 aaKnown RBP12.56□□□□□ -0.4
SYNRG-217ENST00000612223 EXOGQ9Y2C4 368 aaKnown RBP12.56□□□□□ -0.4
SYNRG-217ENST00000612223 P01737 135 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 RAXQ9Y2V3 346 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 A0A1W2PRX2 142 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 FOXS1O43638 330 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 COL8A1P27658 744 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 SNRNP40Q96DI7 357 aaKnown RBP12.56□□□□□ -0.4
SYNRG-217ENST00000612223 RTN4RQ9BZR6 473 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 TMEM140Q9NV12 185 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 HIGD1AQ9Y241 93 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 LOC101059948A0A1B0GTJ6 334 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 ANKRD55Q3KP44 614 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 ZAR1Q86SH2 424 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 J3QR06 171 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 SNRPCP09234 159 aaKnown RBP12.56□□□□□ -0.4
SYNRG-217ENST00000612223 SULT1A1P50225 295 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 RAX2Q96IS3 184 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 MMP24Q9Y5R2 645 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 BVESQ8NE79 360 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 PITPNC1Q9UKF7 332 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 U3KQ87 197 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 CDK5RAP2Q96SN8 1893 aa12.56□□□□□ -0.4
SYNRG-217ENST00000612223 FCN1O00602 326 aa12.55□□□□□ -0.4
SYNRG-217ENST00000612223 ADRB1P08588 477 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms