RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 PPP1R3CQ9UQK1 317 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 MPC1Q9Y5U8 109 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 AUP1Q9Y679 476 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 RPL12P30050 165 aaKnown RBP13.5□□□□□ -0.25
CTSA-214ENST00000606788 OR2B11Q5JQS5 317 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 FAM209AQ5JX71 171 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 MRPL30Q8TCC3 161 aaKnown RBP13.5□□□□□ -0.25
CTSA-214ENST00000606788 CNTNAP3BQ96NU0 1288 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 RTL8AQ9BWD3 113 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 CNTNAP3Q9BZ76 1288 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 KCNS2Q9ULS6 477 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 C3orf85A0A1B0GTC6 90 aa13.49□□□□□ -0.25
CTSA-214ENST00000606788 MLNRO43193 412 aa13.49□□□□□ -0.25
CTSA-214ENST00000606788 CNOT4O95628 575 aaKnown RBP13.49□□□□□ -0.25
CTSA-214ENST00000606788 PLEKHN1Q494U1 663 aaPredicted RBP13.49□□□□□ -0.25
CTSA-214ENST00000606788 ASCL5Q7RTU5 278 aa13.49□□□□□ -0.25
CTSA-214ENST00000606788 BAP18Q8IXM2 172 aa13.49□□□□□ -0.25
CTSA-214ENST00000606788 BCL2L14Q9BZR8 327 aa13.49□□□□□ -0.25
CTSA-214ENST00000606788 CHD3Q12873 2000 aaKnown RBP13.49□□□□□ -0.25
CTSA-214ENST00000606788 MPPED1O15442 326 aa13.49□□□□□ -0.25
CTSA-214ENST00000606788 NAPSAO96009 420 aa13.49□□□□□ -0.25
CTSA-214ENST00000606788 SRSF3P84103 164 aaKnown RBP13.49□□□□□ -0.25
CTSA-214ENST00000606788 DEFA5Q01523 94 aa13.49□□□□□ -0.25
CTSA-214ENST00000606788 SMCO1Q147U7 214 aa13.49□□□□□ -0.25
CTSA-214ENST00000606788 FBXL17Q9UF56 701 aa13.49□□□□□ -0.25
CTSA-214ENST00000606788 MEMO1Q9Y316 297 aa13.49□□□□□ -0.25
CTSA-214ENST00000606788 HKR1P10072 659 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 BMP5P22003 454 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 EIF2S3P41091 472 aaKnown RBP13.48□□□□□ -0.25
CTSA-214ENST00000606788 NHLH2Q02577 135 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 LIAT1Q6ZQX7 453 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 RFESDQ8TAC1 157 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 SNIP1Q8TAD8 396 aaKnown RBP13.48□□□□□ -0.25
CTSA-214ENST00000606788 SUN5Q8TC36 379 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 STARD4Q96DR4 205 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 PROCRQ9UNN8 238 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 SPTAN1Q13813 2472 aaKnown RBP13.48□□□□□ -0.25
CTSA-214ENST00000606788 OR5B21A6NL26 309 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 ZNF705EA8MWA4 302 aaPredicted RBP13.48□□□□□ -0.25
CTSA-214ENST00000606788 PRR33A8MZF0 331 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 H3BP45 60 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 J3QT63 122 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 M0R1B8 84 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 TNFSF13O75888 250 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 TMEM33P57088 247 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 POLR2GP62487 172 aaKnown RBP eCLIP13.48□□□□□ -0.25
CTSA-214ENST00000606788 ATRAIDQ6UW56 229 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 ZNF695Q8IW36 515 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 ASB13Q8WXK3 278 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 MSI2Q96DH6 328 aaKnown RBP13.48□□□□□ -0.25
CTSA-214ENST00000606788 SYT3Q9BQG1 590 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 METRNQ9UJH8 293 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 SESN1Q9Y6P5 492 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 TRDCB7Z8K6 153 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 AQP7O14520 342 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 TPT1P13693 172 aaKnown RBP13.48□□□□□ -0.25
CTSA-214ENST00000606788 AESQ08117 197 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 CLINT1Q14677 625 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 SLC38A6Q8IZM9 456 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 BVESQ8NE79 360 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 PRRX2Q99811 253 aa13.48□□□□□ -0.25
CTSA-214ENST00000606788 PSPNO60542 156 aa13.47□□□□□ -0.25
CTSA-214ENST00000606788 OR8U9P0C7N5 309 aa13.47□□□□□ -0.25
CTSA-214ENST00000606788 CAV2P51636 162 aa13.47□□□□□ -0.25
CTSA-214ENST00000606788 CXorf66Q5JRM2 361 aaPredicted RBP13.47□□□□□ -0.25
CTSA-214ENST00000606788 OR8U1Q8NH10 309 aa13.47□□□□□ -0.25
CTSA-214ENST00000606788 DCTN5Q9BTE1 182 aa13.47□□□□□ -0.25
CTSA-214ENST00000606788 FAM96BQ9Y3D0 163 aa13.47□□□□□ -0.25
CTSA-214ENST00000606788 SPTBN1Q01082 2364 aaKnown RBP13.47□□□□□ -0.25
CTSA-214ENST00000606788 IGHV3-43A0A0B4J1X8 118 aa13.47□□□□□ -0.25
CTSA-214ENST00000606788 TSPAN4O14817 238 aa13.47□□□□□ -0.25
CTSA-214ENST00000606788 ADAM20O43506 726 aa13.47□□□□□ -0.25
CTSA-214ENST00000606788 F12P00748 615 aaPredicted RBP13.47□□□□□ -0.25
CTSA-214ENST00000606788 IGHV3-43DP0DP04 118 aa13.47□□□□□ -0.25
CTSA-214ENST00000606788 CEACAM1P13688 526 aa13.47□□□□□ -0.25
CTSA-214ENST00000606788 SPRNQ5BIV9 151 aa13.47□□□□□ -0.25
CTSA-214ENST00000606788 C22orf34Q6ZV56 151 aa13.47□□□□□ -0.25
CTSA-214ENST00000606788 HSD17B11Q8NBQ5 300 aa13.47□□□□□ -0.25
CTSA-214ENST00000606788 OR10J5Q8NHC4 309 aa13.47□□□□□ -0.25
CTSA-214ENST00000606788 USB1Q9BQ65 265 aaKnown RBP13.47□□□□□ -0.25
CTSA-214ENST00000606788 RYDENQ9NUL5 291 aaKnown RBP13.47□□□□□ -0.25
CTSA-214ENST00000606788 RCL1Q9Y2P8 373 aaKnown RBP13.47□□□□□ -0.25
CTSA-214ENST00000606788 DEFB108AA8MXU0 73 aa13.46□□□□□ -0.25
CTSA-214ENST00000606788 C1QL1O75973 258 aa13.46□□□□□ -0.25
CTSA-214ENST00000606788 LINC00205P59089 165 aa13.46□□□□□ -0.25
CTSA-214ENST00000606788 IL15RAQ13261 267 aa13.46□□□□□ -0.25
CTSA-214ENST00000606788 EDDM3AQ14507 147 aa13.46□□□□□ -0.25
CTSA-214ENST00000606788 HNF4GQ14541 408 aa13.46□□□□□ -0.25
CTSA-214ENST00000606788 MSMPQ1L6U9 139 aa13.46□□□□□ -0.25
CTSA-214ENST00000606788 FAM201AQ5SY85 155 aa13.46□□□□□ -0.25
CTSA-214ENST00000606788 IGFL2Q6UWQ7 119 aa13.46□□□□□ -0.25
CTSA-214ENST00000606788 Q6ZR03 302 aa13.46□□□□□ -0.25
CTSA-214ENST00000606788 TMEM217Q8N7C4 229 aa13.46□□□□□ -0.25
CTSA-214ENST00000606788 LRFN3Q9BTN0 628 aa13.46□□□□□ -0.25
CTSA-214ENST00000606788 TMEM100Q9NV29 134 aa13.46□□□□□ -0.25
CTSA-214ENST00000606788 ATP23Q9Y6H3 246 aa13.46□□□□□ -0.25
CTSA-214ENST00000606788 IL24Q13007 206 aa13.46□□□□□ -0.25
CTSA-214ENST00000606788 MPV17LQ2QL34 196 aa13.46□□□□□ -0.25
CTSA-214ENST00000606788 LGI3Q8N145 548 aa13.46□□□□□ -0.25
CTSA-214ENST00000606788 BPIFCQ8NFQ6 507 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms