RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 RIMS4Q9H426 269 aaPredicted RBP12.77□□□□□ -0.37
CCDC12-211ENST00000604367 AMDHD2Q9Y303 409 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 MEMO1Q9Y316 297 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 TRBV6-7A0A0A0MS04 114 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.76□□□□□ -0.37
CCDC12-211ENST00000604367 SLC33A1O00400 549 aaPredicted RBP12.76□□□□□ -0.37
CCDC12-211ENST00000604367 WNT9BO14905 357 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 SCGB1D2O95969 90 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 BMP5P22003 454 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 NAAAQ02083 359 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 IL15RAQ13261 267 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 KIAA2026Q5HYC2 2103 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 CCDC71LQ8N9Z2 235 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 UBALD1Q8TB05 177 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 PLPPR1Q8TBJ4 325 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 KIRREL1Q96J84 757 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 TP53RKQ96S44 253 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 DMRTA2Q96SC8 542 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 KIF25Q9UIL4 384 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 AUP1Q9Y679 476 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 TMEM210A6NLX4 147 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 HSD17B6O14756 317 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 RRASP10301 218 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 TIMP3P35625 211 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 NHLH1Q02575 133 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 LIAT1Q6ZQX7 453 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 ZNF818PQ6ZRF7 136 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 GAPTQ8N292 157 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 OR1S1Q8NH92 325 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 GTF3AQ92664 365 aaKnown RBP12.76□□□□□ -0.37
CCDC12-211ENST00000604367 IFT22Q9H7X7 185 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 RHOFQ9HBH0 211 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 DUSP13Q9UII6 198 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 SH3BGRL2Q9UJC5 107 aa12.76□□□□□ -0.37
CCDC12-211ENST00000604367 MPPED1O15442 326 aa12.75□□□□□ -0.37
CCDC12-211ENST00000604367 C11orf53Q8IXP5 236 aa12.75□□□□□ -0.37
CCDC12-211ENST00000604367 MSI2Q96DH6 328 aaKnown RBP12.75□□□□□ -0.37
CCDC12-211ENST00000604367 SUCNR1Q9BXA5 334 aa12.75□□□□□ -0.37
CCDC12-211ENST00000604367 SLC5A7Q9GZV3 580 aa12.75□□□□□ -0.37
CCDC12-211ENST00000604367 DCAF16Q9NXF7 216 aa12.75□□□□□ -0.37
CCDC12-211ENST00000604367 C3orf85A0A1B0GTC6 90 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 I3L521 148 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 KITLGP21583 273 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 FAM27E3Q08E93 113 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 ZNF146Q15072 292 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 TIMM23BQ5SRD1 257 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 VHLLQ6RSH7 139 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 PCSK4Q6UW60 755 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 TBC1D26Q86UD7 250 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 GALNT11Q8NCW6 608 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 LHFPL5Q8TAF8 219 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 CXXC4Q9H2H0 198 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 CCL28Q9NRJ3 127 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 TRAPPC2LQ9UL33 140 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 LSM5Q9Y4Y9 91 aaKnown RBP12.74□□□□□ -0.37
CCDC12-211ENST00000604367 ICE1Q9Y2F5 2266 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 LOC105371267A0A1B0GV96 52 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 hCG_1807616A0A1W2PRN6 198 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 TUBAL3A6NHL2 446 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 SH2D1BO14796 132 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 TNFSF12O43508 249 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 TFF1P04155 84 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 GLAP06280 429 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 CTXN2P0C2S0 81 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 PET100P0DJ07 73 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 NUP62P37198 522 aaPredicted RBP12.74□□□□□ -0.37
CCDC12-211ENST00000604367 KCNJ3P48549 501 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 HLA-DRB3P79483 266 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 TOR2AQ5JU69 321 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 RGS7BPQ6MZT1 257 aaPredicted RBP12.74□□□□□ -0.37
CCDC12-211ENST00000604367 LRP11Q86VZ4 500 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 OR10J5Q8NHC4 309 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 MUCL1Q96DR8 90 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 PCNX1Q96RV3 2341 aa12.74□□□□□ -0.37
CCDC12-211ENST00000604367 TUSC2O75896 110 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 HAND1O96004 215 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 MSMPQ1L6U9 139 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 EIF2S3LQ2VIR3 472 aaKnown RBP12.73□□□□□ -0.37
CCDC12-211ENST00000604367 Q8NA96 180 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 OR4A4PQ8NGN8 299 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 CNTNAP3BQ96NU0 1288 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 SFXN3Q9BWM7 321 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 CNTNAP3Q9BZ76 1288 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 OR1A1Q9P1Q5 309 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 NBEAQ8NFP9 2946 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 TRBV6-6A0A0A6YYG2 114 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 LYL1P12980 280 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 MBNL2Q5VZF2 373 aaKnown RBP12.73□□□□□ -0.37
CCDC12-211ENST00000604367 TMEM268Q5VZI3 342 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 ZNF324BQ6AW86 544 aaPredicted RBP12.73□□□□□ -0.37
CCDC12-211ENST00000604367 ZNF880Q6PDB4 577 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 WDR82Q6UXN9 313 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 LGI3Q8N145 548 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 SLC35G3Q8N808 338 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 OR2Z1Q8NG97 314 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 C18orf12Q96KH6 178 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 SSUH2Q9Y2M2 353 aa12.73□□□□□ -0.37
CCDC12-211ENST00000604367 PTPRQQ9UMZ3 2332 aa12.72□□□□□ -0.37
CCDC12-211ENST00000604367 GPR31O00270 319 aa12.72□□□□□ -0.37
CCDC12-211ENST00000604367 PSPNO60542 156 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms