RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 ZNF485Q8NCK3 441 aa13.11□□□□□ -0.31
TUBE1-206ENST00000603722 OR9G1Q8NH87 305 aa13.11□□□□□ -0.31
TUBE1-206ENST00000603722 CAPSLQ8WWF8 208 aa13.11□□□□□ -0.31
TUBE1-206ENST00000603722 AKR1E2Q96JD6 320 aa13.11□□□□□ -0.31
TUBE1-206ENST00000603722 S100A13Q99584 98 aa13.11□□□□□ -0.31
TUBE1-206ENST00000603722 ZNF184Q99676 751 aaPredicted RBP13.11□□□□□ -0.31
TUBE1-206ENST00000603722 WNT10AQ9GZT5 417 aa13.11□□□□□ -0.31
TUBE1-206ENST00000603722 MMP28Q9H239 520 aa13.11□□□□□ -0.31
TUBE1-206ENST00000603722 LIN7BQ9HAP6 207 aa13.11□□□□□ -0.31
TUBE1-206ENST00000603722 IDI2-AS1Q9NZ38 188 aa13.11□□□□□ -0.31
TUBE1-206ENST00000603722 HSPE1-MOB4S4R3N1 261 aa13.11□□□□□ -0.31
TUBE1-206ENST00000603722 PRKDCP78527 4128 aaKnown RBP13.11□□□□□ -0.31
TUBE1-206ENST00000603722 TRAV8-7A0A075B6U6 113 aa13.1□□□□□ -0.31
TUBE1-206ENST00000603722 TRAV39A0A0B4J263 110 aa13.1□□□□□ -0.31
TUBE1-206ENST00000603722 A0A1W2PP11 408 aa13.1□□□□□ -0.31
TUBE1-206ENST00000603722 EFCAB10A6NFE3 127 aa13.1□□□□□ -0.31
TUBE1-206ENST00000603722 LY6LH3BQJ8 138 aa13.1□□□□□ -0.31
TUBE1-206ENST00000603722 GEMIN2O14893 280 aaKnown RBP13.1□□□□□ -0.31
TUBE1-206ENST00000603722 OPN1MWP04001 364 aa13.1□□□□□ -0.31
TUBE1-206ENST00000603722 OPN1MW2P0DN77 364 aa13.1□□□□□ -0.31
TUBE1-206ENST00000603722 OPN1MW3P0DN78 364 aa13.1□□□□□ -0.31
TUBE1-206ENST00000603722 PAX5Q02548 391 aa13.1□□□□□ -0.31
TUBE1-206ENST00000603722 NHLRC3Q5JS37 347 aa13.1□□□□□ -0.31
TUBE1-206ENST00000603722 OGFRL1Q5TC84 451 aaPredicted RBP13.1□□□□□ -0.31
TUBE1-206ENST00000603722 LAIR2Q6ISS4 152 aa13.1□□□□□ -0.31
TUBE1-206ENST00000603722 CCDC144NLQ6NUI1 221 aa13.1□□□□□ -0.31
TUBE1-206ENST00000603722 RFESDQ8TAC1 157 aa13.1□□□□□ -0.31
TUBE1-206ENST00000603722 WIPF2Q8TF74 440 aaPredicted RBP13.1□□□□□ -0.31
TUBE1-206ENST00000603722 OR14A2Q96R54 314 aa13.1□□□□□ -0.31
TUBE1-206ENST00000603722 CITED2Q99967 270 aaPredicted RBP13.1□□□□□ -0.31
TUBE1-206ENST00000603722 SLC25A33Q9BSK2 321 aa13.1□□□□□ -0.31
TUBE1-206ENST00000603722 NCOR1P1Q9H4R4 102 aa13.1□□□□□ -0.31
TUBE1-206ENST00000603722 A0A1W2PPK0 400 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 ANKRD65E5RJM6 399 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 MYL12BO14950 172 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 OR2F2O95006 317 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 FSTP19883 344 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 MNDAP41218 407 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 GNG10P50151 68 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 TAS2R43P59537 309 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 SLC22A6Q4U2R8 563 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 ABCA11PQ4W5N1 156 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 AHSA2Q719I0 299 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 NDUFA11Q86Y39 141 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 STX19Q8N4C7 294 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 TOMM40LQ969M1 308 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 RPEQ96AT9 228 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 OCSTAMPQ9BR26 566 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 IFT22Q9H7X7 185 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 LINC00574Q9H8X3 128 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 PAK1IP1Q9NWT1 392 aaPredicted RBP13.09□□□□□ -0.31
TUBE1-206ENST00000603722 CNOT2Q9NZN8 540 aaKnown RBP13.09□□□□□ -0.31
TUBE1-206ENST00000603722 PSORS1C1Q9UIG5 152 aa13.09□□□□□ -0.31
TUBE1-206ENST00000603722 AMMECR1Q9Y4X0 333 aaPredicted RBP13.09□□□□□ -0.31
TUBE1-206ENST00000603722 TRBV5-7A0A0A0MS05 114 aa13.08□□□□□ -0.32
TUBE1-206ENST00000603722 TMEM30CPA0ZSE6 113 aa13.08□□□□□ -0.32
TUBE1-206ENST00000603722 SH2D7A6NKC9 451 aaPredicted RBP13.08□□□□□ -0.32
TUBE1-206ENST00000603722 OOSP1A8MZH6 123 aa13.08□□□□□ -0.32
TUBE1-206ENST00000603722 NPIPB11E5RHQ5 1161 aa13.08□□□□□ -0.32
TUBE1-206ENST00000603722 G3V4G9 280 aa13.08□□□□□ -0.32
TUBE1-206ENST00000603722 J3QR06 171 aa13.08□□□□□ -0.32
TUBE1-206ENST00000603722 CASQ2O14958 399 aaPredicted RBP13.08□□□□□ -0.32
TUBE1-206ENST00000603722 ZNF780AO75290 641 aaPredicted RBP13.08□□□□□ -0.32
TUBE1-206ENST00000603722 GTF2F2P13984 249 aa13.08□□□□□ -0.32
TUBE1-206ENST00000603722 DOC2BQ14184 412 aa13.08□□□□□ -0.32
TUBE1-206ENST00000603722 MPV17LQ2QL34 196 aa13.08□□□□□ -0.32
TUBE1-206ENST00000603722 ATAD3CQ5T2N8 411 aa13.08□□□□□ -0.32
TUBE1-206ENST00000603722 LINC00596Q86U02 117 aa13.08□□□□□ -0.32
TUBE1-206ENST00000603722 JAGN1Q8N5M9 183 aa13.08□□□□□ -0.32
TUBE1-206ENST00000603722 BPIFB6Q8NFQ5 453 aa13.08□□□□□ -0.32
TUBE1-206ENST00000603722 MUL1Q969V5 352 aa13.08□□□□□ -0.32
TUBE1-206ENST00000603722 RBM14Q96PK6 669 aaKnown RBP13.08□□□□□ -0.32
TUBE1-206ENST00000603722 PSG11Q9UQ72 335 aa13.08□□□□□ -0.32
TUBE1-206ENST00000603722 GPX5O75715 221 aa13.07□□□□□ -0.32
TUBE1-206ENST00000603722 LPLP06858 475 aa13.07□□□□□ -0.32
TUBE1-206ENST00000603722 WNT4P56705 351 aa13.07□□□□□ -0.32
TUBE1-206ENST00000603722 GLIPR1L1Q6UWM5 242 aa13.07□□□□□ -0.32
TUBE1-206ENST00000603722 OR56B4Q8NH76 319 aa13.07□□□□□ -0.32
TUBE1-206ENST00000603722 NEK7Q8TDX7 302 aa13.07□□□□□ -0.32
TUBE1-206ENST00000603722 FBLIM1Q8WUP2 373 aa13.07□□□□□ -0.32
TUBE1-206ENST00000603722 R3HDM4Q96D70 268 aa13.07□□□□□ -0.32
TUBE1-206ENST00000603722 DERL3Q96Q80 235 aa13.07□□□□□ -0.32
TUBE1-206ENST00000603722 PCDHB16Q9NRJ7 776 aa13.07□□□□□ -0.32
TUBE1-206ENST00000603722 MRPS28Q9Y2Q9 187 aaKnown RBP13.07□□□□□ -0.32
TUBE1-206ENST00000603722 A0A1W2PPE3 182 aa13.06□□□□□ -0.32
TUBE1-206ENST00000603722 A0A1W2PRX2 142 aa13.06□□□□□ -0.32
TUBE1-206ENST00000603722 ADARB2-AS1A8MUL3 147 aa13.06□□□□□ -0.32
TUBE1-206ENST00000603722 MAS1P04201 325 aa13.06□□□□□ -0.32
TUBE1-206ENST00000603722 SNRNP70P08621 437 aaKnown RBP13.06□□□□□ -0.32
TUBE1-206ENST00000603722 FAM106CPP0CH98 169 aa13.06□□□□□ -0.32
TUBE1-206ENST00000603722 CELP19835 753 aa13.06□□□□□ -0.32
TUBE1-206ENST00000603722 MADCAM1Q13477 382 aa13.06□□□□□ -0.32
TUBE1-206ENST00000603722 DIAPH2-AS1Q14236 149 aa13.06□□□□□ -0.32
TUBE1-206ENST00000603722 AWAT2Q6E213 333 aa13.06□□□□□ -0.32
TUBE1-206ENST00000603722 OR5AU1Q8NGC0 362 aa13.06□□□□□ -0.32
TUBE1-206ENST00000603722 OR10A7Q8NGE5 316 aa13.06□□□□□ -0.32
TUBE1-206ENST00000603722 OR10X1Q8NGY0 326 aa13.06□□□□□ -0.32
TUBE1-206ENST00000603722 UBALD1Q8TB05 177 aa13.06□□□□□ -0.32
TUBE1-206ENST00000603722 CCDC107Q8WV48 283 aa13.06□□□□□ -0.32
TUBE1-206ENST00000603722 VCXQ9H320 206 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms