RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 MDH2P40926 338 aaKnown RBP12.77□□□□□ -0.37
HIF3A-218ENST00000600383 ECI1P42126 302 aa12.77□□□□□ -0.37
HIF3A-218ENST00000600383 HERV-K104P61576 105 aa12.77□□□□□ -0.37
HIF3A-218ENST00000600383 SUPT4H1P63272 117 aaKnown RBP12.77□□□□□ -0.37
HIF3A-218ENST00000600383 DHODHQ02127 395 aa12.77□□□□□ -0.37
HIF3A-218ENST00000600383 HERPUD1Q15011 391 aa12.77□□□□□ -0.37
HIF3A-218ENST00000600383 ABCA11PQ4W5N1 156 aa12.77□□□□□ -0.37
HIF3A-218ENST00000600383 Q6ZS49 121 aa12.77□□□□□ -0.37
HIF3A-218ENST00000600383 UBALD1Q8TB05 177 aa12.77□□□□□ -0.37
HIF3A-218ENST00000600383 RNASE6Q93091 150 aaKnown RBP12.77□□□□□ -0.37
HIF3A-218ENST00000600383 TMEM246Q9BRR3 403 aa12.77□□□□□ -0.37
HIF3A-218ENST00000600383 METRNQ9UJH8 293 aa12.77□□□□□ -0.37
HIF3A-218ENST00000600383 PKDREJQ9NTG1 2253 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 SFT2D2O95562 160 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 PPYP01298 95 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 PIGPP57054 158 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 CCL8P80075 99 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 COL10A1Q03692 680 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 AESQ08117 197 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 SRSF7Q16629 238 aaKnown RBP eCLIP12.76□□□□□ -0.37
HIF3A-218ENST00000600383 PHLDA2Q53GA4 152 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 FAM201AQ5SY85 155 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 ZNF497Q6ZNH5 498 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 ASCC1Q8N9N2 400 aaKnown RBP12.76□□□□□ -0.37
HIF3A-218ENST00000600383 NEUROG1Q92886 237 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 KIRREL1Q96J84 757 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 KCNJ16Q9NPI9 418 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 DECR2Q9NUI1 292 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 OPN4Q9UHM6 478 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 ERRFI1Q9UJM3 462 aaPredicted RBP12.76□□□□□ -0.37
HIF3A-218ENST00000600383 IGKV1-6A0A0C4DH72 117 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 C13orf42A0A1B0GVH6 325 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 G3V3Q6 166 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 CTSDP07339 412 aaPredicted RBP12.76□□□□□ -0.37
HIF3A-218ENST00000600383 TNFSF4P23510 183 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 GABRA2P47869 451 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 LY6G6FQ5SQ64 297 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 NCMAPQ5T1S8 102 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 LAMTOR1Q6IAA8 161 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 GCSAMQ8N6F7 178 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 FXYD6Q9H0Q3 95 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 IL19Q9UHD0 177 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 ZDHHC8Q9ULC8 765 aa12.76□□□□□ -0.37
HIF3A-218ENST00000600383 VSTM5A8MXK1 200 aa12.75□□□□□ -0.37
HIF3A-218ENST00000600383 SRRM5B3KS81 715 aa12.75□□□□□ -0.37
HIF3A-218ENST00000600383 H7C1Q1 480 aa12.75□□□□□ -0.37
HIF3A-218ENST00000600383 DIRAS3O95661 229 aa12.75□□□□□ -0.37
HIF3A-218ENST00000600383 LMO1P25800 156 aa12.75□□□□□ -0.37
HIF3A-218ENST00000600383 PRDX2P32119 198 aa12.75□□□□□ -0.37
HIF3A-218ENST00000600383 SERPINF1P36955 418 aa12.75□□□□□ -0.37
HIF3A-218ENST00000600383 SGPP2Q8IWX5 399 aa12.75□□□□□ -0.37
HIF3A-218ENST00000600383 CD177Q8N6Q3 437 aa12.75□□□□□ -0.37
HIF3A-218ENST00000600383 MOB3AQ96BX8 217 aa12.75□□□□□ -0.37
HIF3A-218ENST00000600383 TRAF4Q9BUZ4 470 aaPredicted RBP12.75□□□□□ -0.37
HIF3A-218ENST00000600383 GCM1Q9NP62 436 aa12.75□□□□□ -0.37
HIF3A-218ENST00000600383 TRBV6-6A0A0A6YYG2 114 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.74□□□□□ -0.37
HIF3A-218ENST00000600383 MEX3AA1L020 520 aaKnown RBP12.74□□□□□ -0.37
HIF3A-218ENST00000600383 C5orf51A6NDU8 294 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 SHISA9B4DS77 424 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.74□□□□□ -0.37
HIF3A-218ENST00000600383 TSC22D2O75157 780 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 CTXN2P0C2S0 81 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 PSG2P11465 335 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 IFITM2Q01629 132 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 ANKRD55Q3KP44 614 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 C9orf62Q8N4C0 152 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 TPRX1Q8N7U7 411 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 OR5M8Q8NGP6 311 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 OR11L1Q8NGX0 322 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 OR10J5Q8NHC4 309 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 SECTM1Q8WVN6 248 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 RASL12Q9NYN1 266 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 WIPI2Q9Y4P8 454 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 TUBAL3A6NHL2 446 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 CD3EP07766 207 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 HLA-DRB3P79483 266 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 FBXL19-AS1Q494R0 122 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 LRRC37A5PQ49AS3 106 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 ZNF880Q6PDB4 577 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 OR10Z1Q8NGY1 313 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 COQ8AQ8NI60 647 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 RTN4IP1Q8WWV3 396 aaPredicted RBP12.74□□□□□ -0.37
HIF3A-218ENST00000600383 LRRC46Q96FV0 321 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 DHRS9Q9BPW9 319 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 METTL8Q9H825 291 aaKnown RBP12.74□□□□□ -0.37
HIF3A-218ENST00000600383 KIF25Q9UIL4 384 aa12.74□□□□□ -0.37
HIF3A-218ENST00000600383 E7EQL1 145 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 ADAP1O75689 374 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 CYB5R3P00387 301 aaPredicted RBP12.73□□□□□ -0.37
HIF3A-218ENST00000600383 IFNA2P01563 188 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 RPS2P15880 293 aaKnown RBP12.73□□□□□ -0.37
HIF3A-218ENST00000600383 SSTR2P30874 369 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 SORDQ00796 357 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 TLE1Q04724 770 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 SP6Q3SY56 376 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 SHEQ5VZ18 495 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 TGIF2LYQ8IUE0 185 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 SLC38A6Q8IZM9 456 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 ZNF565Q8N9K5 539 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms