RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 GAPTQ8N292 157 aa16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 OR13A1Q8NGR1 328 aa16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 OR4K15Q8NH41 348 aa16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 MCFD2Q8NI22 146 aa16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 MRPL30Q8TCC3 161 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 CCDC107Q8WV48 283 aa16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 CMTM3Q96MX0 182 aa16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 TMPRSS13Q9BYE2 586 aa16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 TRAV18A0A075B6X5 111 aa16.46■□□□□ 0.23
SHKBP1-222ENST00000600320 A0A0G2JMP0 313 aa16.46■□□□□ 0.23
SHKBP1-222ENST00000600320 A0A0X1KG70 313 aa16.46■□□□□ 0.23
SHKBP1-222ENST00000600320 hADV38S2A0JD32 116 aa16.46■□□□□ 0.23
SHKBP1-222ENST00000600320 APOA1P02647 267 aa16.46■□□□□ 0.23
SHKBP1-222ENST00000600320 DLX6P56179 175 aa16.46■□□□□ 0.23
SHKBP1-222ENST00000600320 ERVFRD-1P60508 538 aa16.46■□□□□ 0.23
SHKBP1-222ENST00000600320 ARF6P62330 175 aa16.46■□□□□ 0.23
SHKBP1-222ENST00000600320 ZNF260Q3ZCT1 412 aa16.46■□□□□ 0.23
SHKBP1-222ENST00000600320 LAX1Q8IWV1 398 aa16.46■□□□□ 0.23
SHKBP1-222ENST00000600320 OR4M2Q8NGB6 313 aa16.46■□□□□ 0.23
SHKBP1-222ENST00000600320 NCOR1P1Q9H4R4 102 aa16.46■□□□□ 0.23
SHKBP1-222ENST00000600320 YAE1D1Q9NRH1 226 aa16.46■□□□□ 0.23
SHKBP1-222ENST00000600320 ONECUT1Q9UBC0 465 aa16.46■□□□□ 0.23
SHKBP1-222ENST00000600320 SCGNO76038 276 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 AVPP01185 164 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 DLX1P56177 255 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 MADCAM1Q13477 382 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 CDNFQ49AH0 187 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 FAHD2BQ6P2I3 314 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 CLEC9AQ6UXN8 241 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 C11orf42Q8N5U0 333 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 Q8N7P7 452 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 MRGPRDQ8TDS7 321 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 CORO2AQ92828 525 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 S100A16Q96FQ6 103 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 FAHD2AQ96GK7 314 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 C6orf62Q9GZU0 229 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 SIRPDQ9H106 197 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 DIABLOQ9NR28 239 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 LPAR3Q9UBY5 353 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 OPN4Q9UHM6 478 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 KCNS2Q9ULS6 477 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 LINC00312Q9Y6C7 94 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 WNK2Q9Y3S1 2297 aa16.45■□□□□ 0.22
SHKBP1-222ENST00000600320 MAP1AP78559 2803 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 TRGV10A0A0A0MS01 117 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 A0A0A6YYH2 397 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 A6NJ64 397 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 FAM25AB3EWG3 89 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 FAM25CB3EWG5 89 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 FAM25GB3EWG6 89 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 CA11O75493 328 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 NAPSAO96009 420 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 CGB3P0DN86 165 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 CGB7P0DN87 165 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 PTHLHP12272 177 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 MMP9P14780 707 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 GATA3P23771 443 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 GLP1RP43220 463 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 C17orf58Q2M2W7 97 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 C5orf24Q7Z6I8 188 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 TRAPPC6BQ86SZ2 158 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 PHF21AQ96BD5 680 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 DMRTB1Q96MA1 342 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 CMSS1Q9BQ75 279 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 C7orf69Q9H7B7 122 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 OR6C3Q9NZP0 311 aa16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 UBE2J1Q9Y385 318 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-222ENST00000600320 KIAA2026Q5HYC2 2103 aa16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 TMEM235A6NFC5 223 aa16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 RGS5O15539 181 aa16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 XRCC3O43542 346 aa16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 ZNF728P0DKX0 622 aa16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 TAS2R20P59543 309 aa16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 PRB3Q04118 309 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 CR1LQ2VPA4 569 aa16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 CNPY1Q3B7I2 92 aa16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 C1orf229Q6ZS94 237 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 Q71RC1 249 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 KIR3DL3Q8N743 410 aa16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 ZNF714Q96N38 554 aa16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 WDFY2Q96P53 400 aa16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 TBX15Q96SF7 602 aa16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 AUNIPQ9H7T9 357 aa16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 EXTL2Q9UBQ6 330 aa16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 TRAPPC2LQ9UL33 140 aa16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 KPTNQ9Y664 436 aa16.43■□□□□ 0.22
SHKBP1-222ENST00000600320 SERPINE3A8MV23 424 aa16.42■□□□□ 0.22
SHKBP1-222ENST00000600320 C17orf98A8MV24 154 aa16.42■□□□□ 0.22
SHKBP1-222ENST00000600320 J3QLI3 93 aa16.42■□□□□ 0.22
SHKBP1-222ENST00000600320 MMP23AO75900 390 aa16.42■□□□□ 0.22
SHKBP1-222ENST00000600320 GSTP1P09211 210 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-222ENST00000600320 RCC1P18754 421 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-222ENST00000600320 GDNFP39905 211 aa16.42■□□□□ 0.22
SHKBP1-222ENST00000600320 ARFRP1Q13795 201 aa16.42■□□□□ 0.22
SHKBP1-222ENST00000600320 TMEM69Q5SWH9 247 aa16.42■□□□□ 0.22
SHKBP1-222ENST00000600320 ZNF880Q6PDB4 577 aa16.42■□□□□ 0.22
SHKBP1-222ENST00000600320 UBALD1Q8TB05 177 aa16.42■□□□□ 0.22
SHKBP1-222ENST00000600320 NUDCD2Q8WVJ2 157 aa16.42■□□□□ 0.22
SHKBP1-222ENST00000600320 CHMP1AQ9HD42 196 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms