RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 AQP4P55087 323 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 C17orf58Q2M2W7 97 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 MPV17LQ2QL34 196 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 HLA-DRB5Q30154 266 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 ATAD3CQ5T2N8 411 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 RSBN1Q5VWQ0 802 aaPredicted RBP11.78□□□□□ -0.52
XRCC1-208ENST00000598422 CCDC144NLQ6NUI1 221 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 NANOGP1Q8N7R0 232 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 NKAIN3Q8N8D7 197 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 MRGPRDQ8TDS7 321 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 AKR1E2Q96JD6 320 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 PRSS22Q9GZN4 317 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 VCX3BQ9H321 246 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 NCOR1P1Q9H4R4 102 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 IFT22Q9H7X7 185 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 FKBP14Q9NWM8 211 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 FOXJ3Q9UPW0 622 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 AMMECR1Q9Y4X0 333 aaPredicted RBP11.78□□□□□ -0.52
XRCC1-208ENST00000598422 CD1AP06126 327 aa11.77□□□□□ -0.53
XRCC1-208ENST00000598422 MNDAP41218 407 aa11.77□□□□□ -0.53
XRCC1-208ENST00000598422 PAX5Q02548 391 aa11.77□□□□□ -0.53
XRCC1-208ENST00000598422 GABPB1Q06547 395 aaPredicted RBP11.77□□□□□ -0.53
XRCC1-208ENST00000598422 DOC2BQ14184 412 aa11.77□□□□□ -0.53
XRCC1-208ENST00000598422 LTC4SQ16873 150 aa11.77□□□□□ -0.53
XRCC1-208ENST00000598422 C6orf141Q5SZD1 244 aa11.77□□□□□ -0.53
XRCC1-208ENST00000598422 GLIPR1L1Q6UWM5 242 aa11.77□□□□□ -0.53
XRCC1-208ENST00000598422 CCBE1Q6UXH8 406 aaPredicted RBP11.77□□□□□ -0.53
XRCC1-208ENST00000598422 OR9G1Q8NH87 305 aa11.77□□□□□ -0.53
XRCC1-208ENST00000598422 PLPPR1Q8TBJ4 325 aa11.77□□□□□ -0.53
XRCC1-208ENST00000598422 KIRREL1Q96J84 757 aa11.77□□□□□ -0.53
XRCC1-208ENST00000598422 ZNF702PQ9H963 129 aa11.77□□□□□ -0.53
XRCC1-208ENST00000598422 SPACA1Q9HBV2 294 aa11.77□□□□□ -0.53
XRCC1-208ENST00000598422 IDI2-AS1Q9NZ38 188 aa11.77□□□□□ -0.53
XRCC1-208ENST00000598422 A0A087X0M5 115 aa11.76□□□□□ -0.53
XRCC1-208ENST00000598422 A0A1B0GX30 115 aa11.76□□□□□ -0.53
XRCC1-208ENST00000598422 ERICH4A6NGS2 130 aa11.76□□□□□ -0.53
XRCC1-208ENST00000598422 BUB1B-PAK6H3BSN5 160 aa11.76□□□□□ -0.53
XRCC1-208ENST00000598422 IGLV1-47P01700 117 aa11.76□□□□□ -0.53
XRCC1-208ENST00000598422 CSF1P09603 554 aa11.76□□□□□ -0.53
XRCC1-208ENST00000598422 SSTR5P35346 364 aa11.76□□□□□ -0.53
XRCC1-208ENST00000598422 TPTE2P1Q5T6R2 138 aa11.76□□□□□ -0.53
XRCC1-208ENST00000598422 CDH26Q8IXH8 852 aa11.76□□□□□ -0.53
XRCC1-208ENST00000598422 C11orf44Q8N8P7 122 aa11.76□□□□□ -0.53
XRCC1-208ENST00000598422 TOMM40LQ969M1 308 aa11.76□□□□□ -0.53
XRCC1-208ENST00000598422 RPEQ96AT9 228 aa11.76□□□□□ -0.53
XRCC1-208ENST00000598422 MRPS24Q96EL2 167 aaKnown RBP11.76□□□□□ -0.53
XRCC1-208ENST00000598422 MMP28Q9H239 520 aa11.76□□□□□ -0.53
XRCC1-208ENST00000598422 ZNF581Q9P0T4 197 aa11.76□□□□□ -0.53
XRCC1-208ENST00000598422 A0A1W2PP11 408 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 FAM90A22PA8MWA6 464 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 OOSP1A8MZH6 123 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 H0YHG0 523 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 TSPAN15O95858 294 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 VDAC2P45880 294 aaPredicted RBP11.75□□□□□ -0.53
XRCC1-208ENST00000598422 GNG10P50151 68 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 HABP2Q14520 560 aaPredicted RBP11.75□□□□□ -0.53
XRCC1-208ENST00000598422 SPHARQ15513 63 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 MED22Q15528 200 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 RNLSQ5VYX0 342 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 C16orf82Q7Z2V1 217 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 Q8N2B8 174 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 MS4A15Q8N5U1 240 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 OR10X1Q8NGY0 326 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 RFESDQ8TAC1 157 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 NRG4Q8WWG1 115 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 UQCC2Q9BRT2 126 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 TMED9Q9BVK6 235 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 TPRKBQ9Y3C4 175 aa11.75□□□□□ -0.53
XRCC1-208ENST00000598422 TRAV39A0A0B4J263 110 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 MEGF11A6BM72 1044 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 MCRIP1C9JLW8 97 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 NPIPB11E5RHQ5 1161 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 AIPO00170 330 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 PIN1P1O15428 100 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 FBXO24O75426 580 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 CRTAPO75718 401 aaPredicted RBP11.74□□□□□ -0.53
XRCC1-208ENST00000598422 IGHV3-7P01780 117 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 GZMHP20718 246 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 CD24P25063 80 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 MADCAM1Q13477 382 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 GPR50Q13585 617 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 ACSM3Q53FZ2 586 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 RBM48Q5RL73 367 aaKnown RBP11.74□□□□□ -0.53
XRCC1-208ENST00000598422 OR10A7Q8NGE5 316 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 FAM110DQ8TAY7 271 aaPredicted RBP11.74□□□□□ -0.53
XRCC1-208ENST00000598422 UFD1Q92890 307 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 LEAP2Q969E1 77 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 OR5M11Q96RB7 305 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 BANF2Q9H503 90 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 LINC00574Q9H8X3 128 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 LIN7BQ9HAP6 207 aa11.74□□□□□ -0.53
XRCC1-208ENST00000598422 J3QR06 171 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 CGB3P0DN86 165 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 CGB7P0DN87 165 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 MGMTP16455 207 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 HSPA13P48723 471 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 BLCAPP62952 87 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 RAB12Q6IQ22 244 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 SLC16A12Q6ZSM3 486 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 CCDC107Q8WV48 283 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms