RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 MT-ND4P03905 459 aa18.19■□□□□ 0.5
CHMP2A-204ENST00000597848 ZNF728P0DKX0 622 aa18.19■□□□□ 0.5
CHMP2A-204ENST00000597848 HNF1AP20823 631 aa18.19■□□□□ 0.5
CHMP2A-204ENST00000597848 GLP1RP43220 463 aa18.19■□□□□ 0.5
CHMP2A-204ENST00000597848 ZNF497Q6ZNH5 498 aa18.19■□□□□ 0.5
CHMP2A-204ENST00000597848 RTN4RL2Q86UN3 420 aa18.19■□□□□ 0.5
CHMP2A-204ENST00000597848 ZNF565Q8N9K5 539 aa18.19■□□□□ 0.5
CHMP2A-204ENST00000597848 DYNC2LI1Q8TCX1 351 aa18.19■□□□□ 0.5
CHMP2A-204ENST00000597848 CCDC107Q8WV48 283 aa18.19■□□□□ 0.5
CHMP2A-204ENST00000597848 SLC25A38Q96DW6 304 aa18.19■□□□□ 0.5
CHMP2A-204ENST00000597848 ZNF714Q96N38 554 aa18.19■□□□□ 0.5
CHMP2A-204ENST00000597848 SIRPDQ9H106 197 aa18.19■□□□□ 0.5
CHMP2A-204ENST00000597848 NCOR1P1Q9H4R4 102 aa18.19■□□□□ 0.5
CHMP2A-204ENST00000597848 TMEM160Q9NX00 188 aa18.19■□□□□ 0.5
CHMP2A-204ENST00000597848 UBE2J1Q9Y385 318 aaPredicted RBP18.19■□□□□ 0.5
CHMP2A-204ENST00000597848 hCG_1809904A0A1W2PP81 198 aa18.18■□□□□ 0.5
CHMP2A-204ENST00000597848 A0A1W2PPE2 198 aa18.18■□□□□ 0.5
CHMP2A-204ENST00000597848 A0A1W2PR64 198 aa18.18■□□□□ 0.5
CHMP2A-204ENST00000597848 A0A1W2PRV1 198 aa18.18■□□□□ 0.5
CHMP2A-204ENST00000597848 INAFM1C9JVW0 142 aa18.18■□□□□ 0.5
CHMP2A-204ENST00000597848 ZNF701M0R085 212 aaPredicted RBP18.18■□□□□ 0.5
CHMP2A-204ENST00000597848 M0R1W7 72 aa18.18■□□□□ 0.5
CHMP2A-204ENST00000597848 SCGNO76038 276 aa18.18■□□□□ 0.5
CHMP2A-204ENST00000597848 PAX5Q02548 391 aa18.18■□□□□ 0.5
CHMP2A-204ENST00000597848 PLAC9Q5JTB6 97 aa18.18■□□□□ 0.5
CHMP2A-204ENST00000597848 UBE2NLQ5JXB2 153 aa18.18■□□□□ 0.5
CHMP2A-204ENST00000597848 IL17RELQ6ZVW7 336 aa18.18■□□□□ 0.5
CHMP2A-204ENST00000597848 TCF23Q7RTU1 214 aa18.18■□□□□ 0.5
CHMP2A-204ENST00000597848 OR4K15Q8NH41 348 aa18.18■□□□□ 0.5
CHMP2A-204ENST00000597848 CORO2AQ92828 525 aa18.18■□□□□ 0.5
CHMP2A-204ENST00000597848 DIABLOQ9NR28 239 aa18.18■□□□□ 0.5
CHMP2A-204ENST00000597848 TRAPPC2LQ9UL33 140 aa18.18■□□□□ 0.5
CHMP2A-204ENST00000597848 GNB3P16520 340 aa18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 DYNC1I2Q13409 638 aaKnown RBP18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 C1orf229Q6ZS94 237 aaPredicted RBP18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 C1orf122Q6ZSJ8 110 aa18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 VMO1Q7Z5L0 202 aa18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 TEX29Q8N6K0 151 aa18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 OR13A1Q8NGR1 328 aa18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 MRGPRDQ8TDS7 321 aa18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 DGCR14Q96DF8 476 aaKnown RBP18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 S100A16Q96FQ6 103 aaKnown RBP18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 BEX2Q9BXY8 128 aa18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 GAL3ST2Q9H3Q3 398 aa18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 ZMAT3Q9HA38 289 aaKnown RBP18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 CHMP1AQ9HD42 196 aaPredicted RBP18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 SIRT7Q9NRC8 400 aa18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 TAS2R3Q9NYW6 316 aa18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 CCDC59Q9P031 241 aaKnown RBP18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 AK3Q9UIJ7 227 aa18.17■□□□□ 0.5
CHMP2A-204ENST00000597848 HIVEP2P31629 2446 aa18.16■□□□□ 0.5
CHMP2A-204ENST00000597848 MMP9P14780 707 aa18.16■□□□□ 0.5
CHMP2A-204ENST00000597848 HIST1H1DP16402 221 aaKnown RBP18.16■□□□□ 0.5
CHMP2A-204ENST00000597848 SRP14P37108 136 aaKnown RBP18.16■□□□□ 0.5
CHMP2A-204ENST00000597848 DLX6P56179 175 aa18.16■□□□□ 0.5
CHMP2A-204ENST00000597848 MRPS15P82914 257 aaKnown RBP18.16■□□□□ 0.5
CHMP2A-204ENST00000597848 CDNFQ49AH0 187 aa18.16■□□□□ 0.5
CHMP2A-204ENST00000597848 Q8N7P7 452 aa18.16■□□□□ 0.5
CHMP2A-204ENST00000597848 NANPQ8TBE9 248 aa18.16■□□□□ 0.5
CHMP2A-204ENST00000597848 UPRTQ96BW1 309 aa18.16■□□□□ 0.5
CHMP2A-204ENST00000597848 TBX15Q96SF7 602 aa18.16■□□□□ 0.5
CHMP2A-204ENST00000597848 ABCG5Q9H222 651 aa18.16■□□□□ 0.5
CHMP2A-204ENST00000597848 METTL8Q9H825 291 aaKnown RBP18.16■□□□□ 0.5
CHMP2A-204ENST00000597848 TRAV18A0A075B6X5 111 aa18.15■□□□□ 0.5
CHMP2A-204ENST00000597848 ZNF729A6NN14 1252 aaPredicted RBP18.15■□□□□ 0.5
CHMP2A-204ENST00000597848 C17orf98A8MV24 154 aa18.15■□□□□ 0.5
CHMP2A-204ENST00000597848 ERVFRD-1P60508 538 aa18.15■□□□□ 0.5
CHMP2A-204ENST00000597848 ARL6IP1Q15041 203 aa18.15■□□□□ 0.5
CHMP2A-204ENST00000597848 OLFML2AQ68BL7 652 aa18.15■□□□□ 0.5
CHMP2A-204ENST00000597848 SETD6Q8TBK2 473 aa18.15■□□□□ 0.5
CHMP2A-204ENST00000597848 MRPL30Q8TCC3 161 aaKnown RBP18.15■□□□□ 0.5
CHMP2A-204ENST00000597848 CMSS1Q9BQ75 279 aaKnown RBP18.15■□□□□ 0.5
CHMP2A-204ENST00000597848 DCUN1D5Q9BTE7 237 aa18.15■□□□□ 0.5
CHMP2A-204ENST00000597848 HPGDSO60760 199 aa18.14■□□□□ 0.49
CHMP2A-204ENST00000597848 CD3GP09693 182 aa18.14■□□□□ 0.49
CHMP2A-204ENST00000597848 GZMHP20718 246 aa18.14■□□□□ 0.49
CHMP2A-204ENST00000597848 PRTN3P24158 256 aa18.14■□□□□ 0.49
CHMP2A-204ENST00000597848 DLX1P56177 255 aa18.14■□□□□ 0.49
CHMP2A-204ENST00000597848 PRB3Q04118 309 aaPredicted RBP18.14■□□□□ 0.49
CHMP2A-204ENST00000597848 ARFRP1Q13795 201 aa18.14■□□□□ 0.49
CHMP2A-204ENST00000597848 GAPTQ8N292 157 aa18.14■□□□□ 0.49
CHMP2A-204ENST00000597848 C11orf42Q8N5U0 333 aa18.14■□□□□ 0.49
CHMP2A-204ENST00000597848 DTX3Q8N9I9 347 aa18.14■□□□□ 0.49
CHMP2A-204ENST00000597848 LHX4Q969G2 390 aa18.14■□□□□ 0.49
CHMP2A-204ENST00000597848 CMTM3Q96MX0 182 aa18.14■□□□□ 0.49
CHMP2A-204ENST00000597848 HDHD3Q9BSH5 251 aaPredicted RBP18.14■□□□□ 0.49
CHMP2A-204ENST00000597848 RIMS4Q9H426 269 aaPredicted RBP18.14■□□□□ 0.49
CHMP2A-204ENST00000597848 CALYQ9NYX4 217 aa18.14■□□□□ 0.49
CHMP2A-204ENST00000597848 CDC42EP3Q9UKI2 254 aa18.14■□□□□ 0.49
CHMP2A-204ENST00000597848 KCNK7Q9Y2U2 307 aa18.14■□□□□ 0.49
CHMP2A-204ENST00000597848 IGHV3OR16-10A0A075B7F0 116 aa18.13■□□□□ 0.49
CHMP2A-204ENST00000597848 A0A0A6YYH2 397 aa18.13■□□□□ 0.49
CHMP2A-204ENST00000597848 KBTBD11-OT1A0A1B0GTJ5 212 aa18.13■□□□□ 0.49
CHMP2A-204ENST00000597848 A6NJ64 397 aa18.13■□□□□ 0.49
CHMP2A-204ENST00000597848 SERPINE3A8MV23 424 aa18.13■□□□□ 0.49
CHMP2A-204ENST00000597848 FAM25AB3EWG3 89 aa18.13■□□□□ 0.49
CHMP2A-204ENST00000597848 FAM25CB3EWG5 89 aa18.13■□□□□ 0.49
CHMP2A-204ENST00000597848 FAM25GB3EWG6 89 aa18.13■□□□□ 0.49
CHMP2A-204ENST00000597848 MFNGO00587 321 aa18.13■□□□□ 0.49
CHMP2A-204ENST00000597848 APOA1P02647 267 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms