RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 MALSU1Q96EH3 234 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 SSX3Q99909 188 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 CLEC7AQ9BXN2 247 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 SELENOIQ9C0D9 397 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 SLITRK2Q9H156 845 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 C1RLQ9NZP8 487 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 RCC2Q9P258 522 aaKnown RBP13.56□□□□□ -0.24
SSBP4-204ENST00000597724 VPREB3Q9UKI3 123 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 LRRC42Q9Y546 428 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 FAM90A10PA6NDY2 464 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 FAM90A18PA6NE21 464 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 FAM90A16PA6NEW6 464 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 FAM90A20PA6NIJ5 464 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 FAM90A7PA6NKC0 464 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 FAM90A22PA8MWA6 464 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 FAM90A12PA8MX19 464 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 FAM90A5PA8MXJ8 464 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 FAM90A23PA8MXZ1 464 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 H3BUX3 64 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 SLC22A1O15245 554 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 FAM90A15PP0C7V4 464 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 FAM90A13PP0C7W8 464 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 FAM90A14PP0C7W9 464 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 FAM90A24PP0C7X0 464 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 UBBP0CG47 229 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 CFPP27918 469 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 RELBQ01201 579 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 LRRC75BQ2VPJ9 315 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 UBE2UQ5VVX9 321 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 BRICD5Q6PL45 260 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 ABHD12Q8N2K0 398 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 C3orf56Q8N813 242 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 Q96M66 194 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 LINC00574Q9H8X3 128 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 SPACA1Q9HBV2 294 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 CALYQ9NYX4 217 aa13.55□□□□□ -0.24
SSBP4-204ENST00000597724 A0A087X0M5 115 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 A0A1B0GX30 115 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 VSIG8P0DPA2 414 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 HTR2CP28335 458 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 CD34P28906 385 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 GLP1RP43220 463 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 SSX2Q16385 188 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 MINOS1Q5TGZ0 78 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 RTN4RL2Q86UN3 420 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 PIFOQ8TCI5 191 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 MRGPRDQ8TDS7 321 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 NEK7Q8TDX7 302 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 FAM46BQ96A09 425 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 KIRREL1Q96J84 757 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 GFI1Q99684 422 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 CST11Q9H112 138 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 NDUFB11Q9NX14 153 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 MMP24Q9Y5R2 645 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 MINOS1-NBL1R4GNA1 71 aa13.54□□□□□ -0.24
SSBP4-204ENST00000597724 TMEM30CPA0ZSE6 113 aa13.53□□□□□ -0.24
SSBP4-204ENST00000597724 VGLL3A8MV65 326 aa13.53□□□□□ -0.24
SSBP4-204ENST00000597724 MCRIP1C9JLW8 97 aa13.53□□□□□ -0.24
SSBP4-204ENST00000597724 NPIPB11E5RHQ5 1161 aa13.53□□□□□ -0.24
SSBP4-204ENST00000597724 NDUFA7O95182 113 aa13.53□□□□□ -0.24
SSBP4-204ENST00000597724 IGLV1-47P01700 117 aa13.53□□□□□ -0.24
SSBP4-204ENST00000597724 MDKP21741 143 aaPredicted RBP13.53□□□□□ -0.24
SSBP4-204ENST00000597724 CALRP27797 417 aaKnown RBP13.53□□□□□ -0.24
SSBP4-204ENST00000597724 RAG2P55895 527 aa13.53□□□□□ -0.24
SSBP4-204ENST00000597724 RBM39Q14498 530 aaKnown RBP13.53□□□□□ -0.24
SSBP4-204ENST00000597724 SIGIRRQ6IA17 410 aa13.53□□□□□ -0.24
SSBP4-204ENST00000597724 RAB12Q6IQ22 244 aa13.53□□□□□ -0.24
SSBP4-204ENST00000597724 CD200R1LQ6Q8B3 271 aa13.53□□□□□ -0.24
SSBP4-204ENST00000597724 ZNF497Q6ZNH5 498 aa13.53□□□□□ -0.24
SSBP4-204ENST00000597724 OR4P4Q8NGL7 312 aa13.53□□□□□ -0.24
SSBP4-204ENST00000597724 OR6M1Q8NGM8 313 aa13.53□□□□□ -0.24
SSBP4-204ENST00000597724 ZNF286AQ9HBT8 521 aa13.53□□□□□ -0.24
SSBP4-204ENST00000597724 AK6Q9Y3D8 172 aaKnown RBP13.53□□□□□ -0.24
SSBP4-204ENST00000597724 PEX16Q9Y5Y5 336 aa13.53□□□□□ -0.24
SSBP4-204ENST00000597724 TRAV39A0A0B4J263 110 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 FAM172BPA6NC97 362 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 POM121CA8CG34 1229 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 SLC17A2O00624 439 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 MPIG6BO95866 241 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 IL1AP01583 271 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 MT-ND4P03905 459 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 GLAP06280 429 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 GZMHP20718 246 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 FUT3P21217 361 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 RPS27AP62979 156 aaKnown RBP13.52□□□□□ -0.25
SSBP4-204ENST00000597724 QRFPP83859 136 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 OR10K2Q6IF99 312 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 OR4F5Q8NH21 305 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 RFESDQ8TAC1 157 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 KCNG3Q8TAE7 436 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 NDNFQ8TB73 568 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 ZNF596Q8TC21 504 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 ZNF747Q9BV97 191 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 IDI2-AS1Q9NZ38 188 aa13.52□□□□□ -0.25
SSBP4-204ENST00000597724 A0A1B0GUS0 222 aa13.51□□□□□ -0.25
SSBP4-204ENST00000597724 TMEM14DPA8MWL7 114 aa13.51□□□□□ -0.25
SSBP4-204ENST00000597724 H3BUI4 141 aa13.51□□□□□ -0.25
SSBP4-204ENST00000597724 CCRL2O00421 344 aa13.51□□□□□ -0.25
SSBP4-204ENST00000597724 BPNT1O95861 308 aa13.51□□□□□ -0.25
SSBP4-204ENST00000597724 NFYBP25208 207 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms