RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 JTBO76095 146 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 OR2F2O95006 317 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 MT-ND2P03891 347 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 FRMD6-AS1P0C7T7 363 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 LIMS3P0CW19 117 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 LIMS4P0CW20 117 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 ZNF728P0DKX0 622 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 ZNF44P15621 663 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 SLC6A1P30531 599 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 PPP3R1P63098 170 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 ST3GAL4Q11206 333 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 KISS1Q15726 138 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 SPIN3Q5JUX0 258 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 OR2G6Q5TZ20 316 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 ZNF695Q8IW36 515 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 OR8H2Q8N162 312 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 OR5M8Q8NGP6 311 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 RBM14Q96PK6 669 aaKnown RBP12.19□□□□□ -0.46
LIG1-214ENST00000597146 NR1H4Q96RI1 486 aaPredicted RBP12.19□□□□□ -0.46
LIG1-214ENST00000597146 CHST6Q9GZX3 395 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 DIMT1Q9UNQ2 313 aaKnown RBP12.19□□□□□ -0.46
LIG1-214ENST00000597146 IGHV2-26A0A0B4J1V2 119 aa12.18□□□□□ -0.46
LIG1-214ENST00000597146 SIRPB1O00241 398 aa12.18□□□□□ -0.46
LIG1-214ENST00000597146 ADARB1P78563 741 aaKnown RBP12.18□□□□□ -0.46
LIG1-214ENST00000597146 MEF2CQ06413 473 aaPredicted RBP12.18□□□□□ -0.46
LIG1-214ENST00000597146 TCF23Q7RTU1 214 aa12.18□□□□□ -0.46
LIG1-214ENST00000597146 SAXO1Q8IYX7 474 aa12.18□□□□□ -0.46
LIG1-214ENST00000597146 PARP16Q8N5Y8 322 aa12.18□□□□□ -0.46
LIG1-214ENST00000597146 BPIFB6Q8NFQ5 453 aa12.18□□□□□ -0.46
LIG1-214ENST00000597146 JAM3Q9BX67 310 aa12.18□□□□□ -0.46
LIG1-214ENST00000597146 FAM192AQ9GZU8 254 aa12.18□□□□□ -0.46
LIG1-214ENST00000597146 RHOFQ9HBH0 211 aa12.18□□□□□ -0.46
LIG1-214ENST00000597146 HMG20AQ9NP66 347 aa12.18□□□□□ -0.46
LIG1-214ENST00000597146 LINC00527Q9UJ94 153 aa12.18□□□□□ -0.46
LIG1-214ENST00000597146 ING4Q9UNL4 249 aa12.18□□□□□ -0.46
LIG1-214ENST00000597146 MGST3O14880 152 aa12.17□□□□□ -0.46
LIG1-214ENST00000597146 RBP4P02753 201 aa12.17□□□□□ -0.46
LIG1-214ENST00000597146 RSU1Q15404 277 aa12.17□□□□□ -0.46
LIG1-214ENST00000597146 OGFRL1Q5TC84 451 aaPredicted RBP12.17□□□□□ -0.46
LIG1-214ENST00000597146 OR4P4Q8NGL7 312 aa12.17□□□□□ -0.46
LIG1-214ENST00000597146 TNFAIP8L1Q8WVP5 186 aa12.17□□□□□ -0.46
LIG1-214ENST00000597146 GGHQ92820 318 aa12.17□□□□□ -0.46
LIG1-214ENST00000597146 RBMXL1Q96E39 390 aaKnown RBP12.17□□□□□ -0.46
LIG1-214ENST00000597146 ZNF714Q96N38 554 aa12.17□□□□□ -0.46
LIG1-214ENST00000597146 SEBOXQ9HB31 216 aaPredicted RBP12.17□□□□□ -0.46
LIG1-214ENST00000597146 ZFP57Q9NU63 452 aa12.17□□□□□ -0.46
LIG1-214ENST00000597146 ING3Q9NXR8 418 aa12.17□□□□□ -0.46
LIG1-214ENST00000597146 CKLFQ9UBR5 152 aa12.17□□□□□ -0.46
LIG1-214ENST00000597146 CLEC2DQ9UHP7 191 aa12.17□□□□□ -0.46
LIG1-214ENST00000597146 KIAA1109Q2LD37 5005 aa12.16□□□□□ -0.46
LIG1-214ENST00000597146 TMEM82A0PJX8 343 aa12.16□□□□□ -0.46
LIG1-214ENST00000597146 MYL12BO14950 172 aa12.16□□□□□ -0.46
LIG1-214ENST00000597146 ZNF737O75373 536 aa12.16□□□□□ -0.46
LIG1-214ENST00000597146 ZNF146Q15072 292 aa12.16□□□□□ -0.46
LIG1-214ENST00000597146 CDK5R1Q15078 307 aa12.16□□□□□ -0.46
LIG1-214ENST00000597146 ZNF260Q3ZCT1 412 aa12.16□□□□□ -0.46
LIG1-214ENST00000597146 GHSRQ92847 366 aa12.16□□□□□ -0.46
LIG1-214ENST00000597146 SCN3BQ9NY72 215 aa12.16□□□□□ -0.46
LIG1-214ENST00000597146 TAS2R4Q9NYW5 299 aa12.16□□□□□ -0.46
LIG1-214ENST00000597146 IL36RNQ9UBH0 155 aa12.16□□□□□ -0.46
LIG1-214ENST00000597146 TRGV10A0A0A0MS01 117 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 ERICH4A6NGS2 130 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 PTGES3LE9PB15 166 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 OGG1O15527 345 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 KDM4BO94953 1096 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 HTR3BO95264 441 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 OR2H2O95918 312 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 CSTBP04080 98 aaKnown RBP12.15□□□□□ -0.46
LIG1-214ENST00000597146 HTR1DP28221 377 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 MTNR1BP49286 362 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 TAS2R43P59537 309 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 AHSA2Q719I0 299 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 TPRX1Q8N7U7 411 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 OR52N4Q8NGI2 321 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 OR52N1Q8NH53 320 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 TMEM106AQ96A25 262 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 CLEC7AQ9BXN2 247 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 TMEM138Q9NPI0 162 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 PCDHB16Q9NRJ7 776 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 CNOT2Q9NZN8 540 aaKnown RBP12.15□□□□□ -0.46
LIG1-214ENST00000597146 ERGIC3Q9Y282 383 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 SESN1Q9Y6P5 492 aa12.15□□□□□ -0.46
LIG1-214ENST00000597146 IGKV1-12A0A0C4DH73 117 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 PNMA8CA0A1B0GUJ8 204 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 CASQ2O14958 399 aaPredicted RBP12.14□□□□□ -0.47
LIG1-214ENST00000597146 IGKV1D-12P01611 117 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 GNAO1P09471 354 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 BDKRB2P30411 391 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 BRS3P32247 399 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 GABPB1Q06547 395 aaPredicted RBP12.14□□□□□ -0.47
LIG1-214ENST00000597146 XAF1Q6GPH4 301 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 BAIAP2L2Q6UXY1 529 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 LCNL1Q6ZST4 164 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 ZFP41Q8N8Y5 198 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 CHST4Q8NCG5 386 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 OR8U1Q8NH10 309 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 CHPT1Q8WUD6 406 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 SMIM19Q96E16 107 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 TM2D3Q9BRN9 247 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 METTL9Q9H1A3 318 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms