RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 IGHV3-7P01780 117 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 EIF4EP06730 217 aaKnown RBP7.67□□□□□ -1.18
ZNF548-206ENST00000597047 FCER2P06734 321 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 CD3GP09693 182 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 FAM90A15PP0C7V4 464 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 FAM90A13PP0C7W8 464 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 FAM90A14PP0C7W9 464 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 FAM90A24PP0C7X0 464 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 OMGP23515 440 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 COX7A1P24310 79 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 NFYBP25208 207 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 CHATP28329 748 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 TMEM50BP56557 158 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 FAM189A2Q15884 450 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 RNASE12Q5GAN4 147 aaKnown RBP7.67□□□□□ -1.18
ZNF548-206ENST00000597047 PLAC9Q5JTB6 97 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 UBE2NLQ5JXB2 153 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 C5orf24Q7Z6I8 188 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 LHX4Q969G2 390 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 COQ2Q96H96 371 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 C1orf159Q96HA4 380 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 ZNF714Q96N38 554 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 CMSS1Q9BQ75 279 aaKnown RBP7.67□□□□□ -1.18
ZNF548-206ENST00000597047 BEX2Q9BXY8 128 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 MMP27Q9H306 513 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 ELF5Q9UKW6 265 aaPredicted RBP7.67□□□□□ -1.18
ZNF548-206ENST00000597047 ETV7Q9Y603 341 aa7.67□□□□□ -1.18
ZNF548-206ENST00000597047 C2CD3Q4AC94 2353 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 TRBV23-1A0A0A0MS06 115 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 hCG_1809904A0A1W2PP81 198 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 A0A1W2PPE2 198 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 A0A1W2PR64 198 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 A0A1W2PRV1 198 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 INAFM1C9JVW0 142 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 CTDSP2O14595 271 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 AVPP01185 164 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 MT-ND4P03905 459 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 PTHLHP12272 177 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 ELK1P19419 428 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 CDK2P24941 298 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 S100A5P33763 92 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 MNDAP41218 407 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 GNG2P59768 71 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 MEF2CQ06413 473 aaPredicted RBP7.66□□□□□ -1.18
ZNF548-206ENST00000597047 KRTAP1-1Q07627 177 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 KLRD1Q13241 179 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 DYNC1I2Q13409 638 aaKnown RBP7.66□□□□□ -1.18
ZNF548-206ENST00000597047 TMEM69Q5SWH9 247 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 FAM120AOSQ5T036 256 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 PRAMEF5Q5TYX0 476 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 RSBN1Q5VWQ0 802 aaPredicted RBP7.66□□□□□ -1.18
ZNF548-206ENST00000597047 SLC35E4Q6ICL7 350 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 VMO1Q7Z5L0 202 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 FAM89BQ8N5H3 189 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 ZNF565Q8N9K5 539 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 LY6G5BQ8NDX9 201 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 OR13A1Q8NGR1 328 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 ACOT12Q8WYK0 555 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 MAFIPQ8WZ33 124 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 KCTD12Q96CX2 325 aaKnown RBP7.66□□□□□ -1.18
ZNF548-206ENST00000597047 SLC25A38Q96DW6 304 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 WDFY2Q96P53 400 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 SUCNR1Q9BXA5 334 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 TMPRSS13Q9BYE2 586 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 NXF2Q9GZY0 626 aaKnown RBP7.66□□□□□ -1.18
ZNF548-206ENST00000597047 SEBOXQ9HB31 216 aaPredicted RBP7.66□□□□□ -1.18
ZNF548-206ENST00000597047 KCNIP1Q9NZI2 227 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 RCC2Q9P258 522 aaKnown RBP7.66□□□□□ -1.18
ZNF548-206ENST00000597047 FBLN5Q9UBX5 448 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 ZNF469Q96JG9 3925 aaPredicted RBP7.66□□□□□ -1.18
ZNF548-206ENST00000597047 WNK2Q9Y3S1 2297 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 ACANP16112 2415 aa7.66□□□□□ -1.18
ZNF548-206ENST00000597047 IGHV3-43A0A0B4J1X8 118 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 MEIS3P1A6NDR6 274 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 TMEM235A6NFC5 223 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 RAB27BO00194 218 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 ABCA1O95477 2261 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 ZNF728P0DKX0 622 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 IGHV3-43DP0DP04 118 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 HIST1H1DP16402 221 aaKnown RBP7.65□□□□□ -1.18
ZNF548-206ENST00000597047 RCC1P18754 421 aaPredicted RBP7.65□□□□□ -1.18
ZNF548-206ENST00000597047 HNF1AP20823 631 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 ERP29P30040 261 aaKnown RBP7.65□□□□□ -1.18
ZNF548-206ENST00000597047 KCNJ3P48549 501 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 PAX2Q02962 417 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 PAX8Q06710 450 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 ZNF497Q6ZNH5 498 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 SNX29P2Q8IUI4 249 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 LAX1Q8IWV1 398 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 OR6Q1Q8NGQ2 317 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 NUDCD2Q8WVJ2 157 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 IL1F10Q8WWZ1 152 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 C22orf15Q8WYQ4 148 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 LEAP2Q969E1 77 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 ARL11Q969Q4 196 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 PTX4Q96A99 478 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 ST6GALNAC5Q9BVH7 336 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 GAL3ST2Q9H3Q3 398 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 IFT22Q9H7X7 185 aa7.65□□□□□ -1.18
ZNF548-206ENST00000597047 OR6C3Q9NZP0 311 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms