RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 PLA2G10O15496 165 aa12.19□□□□□ -0.46
VRK3-212ENST00000596814 LYRM1O43325 122 aa12.19□□□□□ -0.46
VRK3-212ENST00000596814 CD3DP04234 171 aa12.19□□□□□ -0.46
VRK3-212ENST00000596814 AKAIN1P0CW23 69 aa12.19□□□□□ -0.46
VRK3-212ENST00000596814 RPS2P15880 293 aaKnown RBP12.19□□□□□ -0.46
VRK3-212ENST00000596814 FAUP35544 74 aaKnown RBP12.19□□□□□ -0.46
VRK3-212ENST00000596814 P2RX3P56373 397 aa12.19□□□□□ -0.46
VRK3-212ENST00000596814 SRSF7Q16629 238 aaKnown RBP eCLIP12.19□□□□□ -0.46
VRK3-212ENST00000596814 ACTBL2Q562R1 376 aa12.19□□□□□ -0.46
VRK3-212ENST00000596814 LRRC10Q5BKY1 277 aa12.19□□□□□ -0.46
VRK3-212ENST00000596814 STEAP1BQ6NZ63 245 aa12.19□□□□□ -0.46
VRK3-212ENST00000596814 ZNF880Q6PDB4 577 aa12.19□□□□□ -0.46
VRK3-212ENST00000596814 CCDC107Q8WV48 283 aa12.19□□□□□ -0.46
VRK3-212ENST00000596814 C7orf50Q9BRJ6 194 aaKnown RBP12.19□□□□□ -0.46
VRK3-212ENST00000596814 CELSR2Q9HCU4 2923 aa12.19□□□□□ -0.46
VRK3-212ENST00000596814 TRAPPC2LQ9UL33 140 aa12.19□□□□□ -0.46
VRK3-212ENST00000596814 TACC2O95359 2948 aa12.19□□□□□ -0.46
VRK3-212ENST00000596814 MEIKINA0A087WXM9 373 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 FUOMA2VDF0 154 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 CENPXA8MT69 81 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 NDUFB3O43676 98 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 NDUFB7P17568 137 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 TBPP20226 339 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 GIFP27352 417 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 GLIPR1P48060 266 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 EDDM3BP56851 147 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 TAS2R46P59540 309 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 RGS21Q2M5E4 152 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 Q6ZS49 121 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 TPRX1Q8N7U7 411 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 OR4C16Q8NGL9 310 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 C11orf54Q9H0W9 315 aaPredicted RBP12.18□□□□□ -0.46
VRK3-212ENST00000596814 HRASLSQ9HDD0 168 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 MIOXQ9UGB7 285 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 ANXA10Q9UJ72 324 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 MGAT4AQ9UM21 535 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 ABCA12Q86UK0 2595 aa12.18□□□□□ -0.46
VRK3-212ENST00000596814 IGKV1D-8A0A087WSZ0 117 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 KIR2DS1A0A191URI9 304 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 ODAMA1E959 279 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 DVL1O14640 695 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 RAB3DO95716 219 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 CD74P04233 296 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 RCC1P18754 421 aaPredicted RBP12.17□□□□□ -0.46
VRK3-212ENST00000596814 DNASE1P24855 282 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 ERP29P30040 261 aaKnown RBP12.17□□□□□ -0.46
VRK3-212ENST00000596814 HRH1P35367 487 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 KIR2DS4P43632 304 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 ARPC4P59998 168 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 HLA-DRB3P79483 266 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 KIR2DS1Q14954 304 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 CHRFAM7AQ494W8 412 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 RNASE10Q5GAN6 216 aaKnown RBP12.17□□□□□ -0.46
VRK3-212ENST00000596814 FAAP20Q6NZ36 180 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 MZT2BQ6NZ67 158 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 CLEC2AQ6UVW9 174 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 NLRC3Q7RTR2 1065 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 FGFRL1Q8N441 504 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 OR8B3Q8NGG8 313 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 OR5H2Q8NGV7 314 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 OR8B2Q96RD0 313 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 MBNL3Q9NUK0 354 aaKnown RBP12.17□□□□□ -0.46
VRK3-212ENST00000596814 PCDHB10Q9UN67 800 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 DSCAML1Q8TD84 2053 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 ANKRD17O75179 2603 aaKnown RBP12.17□□□□□ -0.46
VRK3-212ENST00000596814 TRAV39A0A0B4J263 110 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 M0QYG6 137 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 GLP1RP43220 463 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 MEF2DQ14814 521 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 OR5AP2Q8NGF4 316 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 OR4D10Q8NGI6 311 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 FAM168AQ92567 244 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 NEIL1Q96FI4 390 aaPredicted RBP12.17□□□□□ -0.46
VRK3-212ENST00000596814 PIMREGQ9BSJ6 248 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 BPESC1Q9GZL8 116 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 NARFLQ9H6Q4 476 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 BEX4Q9NWD9 120 aaPredicted RBP12.17□□□□□ -0.46
VRK3-212ENST00000596814 MCUBQ9NWR8 336 aa12.17□□□□□ -0.46
VRK3-212ENST00000596814 KIAA2026Q5HYC2 2103 aa12.16□□□□□ -0.46
VRK3-212ENST00000596814 NAP1L6A6NFF2 107 aa12.16□□□□□ -0.46
VRK3-212ENST00000596814 TRDCB7Z8K6 153 aa12.16□□□□□ -0.46
VRK3-212ENST00000596814 NDUFS8O00217 210 aa12.16□□□□□ -0.46
VRK3-212ENST00000596814 FCN3O75636 299 aa12.16□□□□□ -0.46
VRK3-212ENST00000596814 PTTG1O95997 202 aa12.16□□□□□ -0.46
VRK3-212ENST00000596814 PMP2P02689 132 aa12.16□□□□□ -0.46
VRK3-212ENST00000596814 OR3A3P47888 321 aa12.16□□□□□ -0.46
VRK3-212ENST00000596814 C6orf183Q5T699 404 aa12.16□□□□□ -0.46
VRK3-212ENST00000596814 MRGPRDQ8TDS7 321 aa12.16□□□□□ -0.46
VRK3-212ENST00000596814 TINAGL1Q9GZM7 467 aaPredicted RBP12.16□□□□□ -0.46
VRK3-212ENST00000596814 NCOR1P1Q9H4R4 102 aa12.16□□□□□ -0.46
VRK3-212ENST00000596814 KCNIP1Q9NZI2 227 aa12.16□□□□□ -0.46
VRK3-212ENST00000596814 OR6C3Q9NZP0 311 aa12.16□□□□□ -0.46
VRK3-212ENST00000596814 FABP7O15540 132 aa12.15□□□□□ -0.46
VRK3-212ENST00000596814 AMY2AP04746 511 aa12.15□□□□□ -0.46
VRK3-212ENST00000596814 GSTT2P0CG29 244 aa12.15□□□□□ -0.46
VRK3-212ENST00000596814 CDK10Q15131 360 aa12.15□□□□□ -0.46
VRK3-212ENST00000596814 DEFB113Q30KQ7 82 aa12.15□□□□□ -0.46
VRK3-212ENST00000596814 VAX1Q5SQQ9 334 aa12.15□□□□□ -0.46
VRK3-212ENST00000596814 TRAT1Q6PIZ9 186 aa12.15□□□□□ -0.46
VRK3-212ENST00000596814 OR13A1Q8NGR1 328 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms