RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 MRGPRDQ8TDS7 321 aa12.74□□□□□ -0.37
SMCO4-206ENST00000596676 RAB3CQ96E17 227 aa12.74□□□□□ -0.37
SMCO4-206ENST00000596676 TBX15Q96SF7 602 aa12.74□□□□□ -0.37
SMCO4-206ENST00000596676 PCGF1Q9BSM1 259 aa12.74□□□□□ -0.37
SMCO4-206ENST00000596676 MRI1Q9BV20 369 aa12.74□□□□□ -0.37
SMCO4-206ENST00000596676 SLIRPQ9GZT3 109 aaKnown RBP12.74□□□□□ -0.37
SMCO4-206ENST00000596676 SIRPDQ9H106 197 aa12.74□□□□□ -0.37
SMCO4-206ENST00000596676 MIXL1Q9H2W2 232 aa12.74□□□□□ -0.37
SMCO4-206ENST00000596676 SPACA1Q9HBV2 294 aa12.74□□□□□ -0.37
SMCO4-206ENST00000596676 ETV7Q9Y603 341 aa12.74□□□□□ -0.37
SMCO4-206ENST00000596676 TRBV23-1A0A0A0MS06 115 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 METTL21EPA6NDL7 271 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 INAFM1C9JVW0 142 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 MMP9P14780 707 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 RCC1P18754 421 aaPredicted RBP12.73□□□□□ -0.37
SMCO4-206ENST00000596676 ELK1P19419 428 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 CDK2P24941 298 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 GLP1RP43220 463 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 MEF2CQ06413 473 aaPredicted RBP12.73□□□□□ -0.37
SMCO4-206ENST00000596676 KLRD1Q13241 179 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 CDNFQ49AH0 187 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 SLC35E4Q6ICL7 350 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 BTNL3Q6UXE8 466 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 TRAPPC6BQ86SZ2 158 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 PDZD9Q8IXQ8 264 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 MRPL30Q8TCC3 161 aaKnown RBP12.73□□□□□ -0.37
SMCO4-206ENST00000596676 KCTD12Q96CX2 325 aaKnown RBP12.73□□□□□ -0.37
SMCO4-206ENST00000596676 DGCR14Q96DF8 476 aaKnown RBP12.73□□□□□ -0.37
SMCO4-206ENST00000596676 POM121Q96HA1 1249 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 WDFY2Q96P53 400 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 SIRT7Q9NRC8 400 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 CCDC59Q9P031 241 aaKnown RBP12.73□□□□□ -0.37
SMCO4-206ENST00000596676 SOX21Q9Y651 276 aaPredicted RBP12.73□□□□□ -0.37
SMCO4-206ENST00000596676 AUP1Q9Y679 476 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 SVEP1Q4LDE5 3571 aa12.73□□□□□ -0.37
SMCO4-206ENST00000596676 TRAV18A0A075B6X5 111 aa12.72□□□□□ -0.37
SMCO4-206ENST00000596676 hADV38S2A0JD32 116 aa12.72□□□□□ -0.37
SMCO4-206ENST00000596676 TMEM30CPA0ZSE6 113 aa12.72□□□□□ -0.37
SMCO4-206ENST00000596676 MFNGO00587 321 aa12.72□□□□□ -0.37
SMCO4-206ENST00000596676 CGB3P0DN86 165 aa12.72□□□□□ -0.37
SMCO4-206ENST00000596676 CGB7P0DN87 165 aa12.72□□□□□ -0.37
SMCO4-206ENST00000596676 HIST1H1DP16402 221 aaKnown RBP12.72□□□□□ -0.37
SMCO4-206ENST00000596676 OMGP23515 440 aa12.72□□□□□ -0.37
SMCO4-206ENST00000596676 RANBP1P43487 201 aa12.72□□□□□ -0.37
SMCO4-206ENST00000596676 SCAND1P57086 179 aa12.72□□□□□ -0.37
SMCO4-206ENST00000596676 RBM39Q14498 530 aaKnown RBP12.72□□□□□ -0.37
SMCO4-206ENST00000596676 C17orf58Q2M2W7 97 aa12.72□□□□□ -0.37
SMCO4-206ENST00000596676 KLF17Q5JT82 389 aaPredicted RBP12.72□□□□□ -0.37
SMCO4-206ENST00000596676 UBE2NLQ5JXB2 153 aa12.72□□□□□ -0.37
SMCO4-206ENST00000596676 FAM120AOSQ5T036 256 aa12.72□□□□□ -0.37
SMCO4-206ENST00000596676 ZNF782Q6ZMW2 699 aaPredicted RBP12.72□□□□□ -0.37
SMCO4-206ENST00000596676 VMO1Q7Z5L0 202 aa12.72□□□□□ -0.37
SMCO4-206ENST00000596676 RFESDQ8TAC1 157 aa12.72□□□□□ -0.37
SMCO4-206ENST00000596676 ABCG5Q9H222 651 aa12.72□□□□□ -0.37
SMCO4-206ENST00000596676 HSF4Q9ULV5 492 aa12.72□□□□□ -0.37
SMCO4-206ENST00000596676 LINC00312Q9Y6C7 94 aa12.72□□□□□ -0.37
SMCO4-206ENST00000596676 A0A1W2PRD5 423 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 A0A1W2PRF3 423 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 A0A1W2PRM7 423 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 ZNF701M0R085 212 aaPredicted RBP12.71□□□□□ -0.37
SMCO4-206ENST00000596676 TOX4O94842 621 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 GLAP06280 429 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 ZNF728P0DKX0 622 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 IGHV4-38-2P0DP08 117 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 SSTR5P35346 364 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 SOX6P35712 828 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 KCNJ3P48549 501 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 LTC4SQ16873 150 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 C11orf91Q3C1V1 193 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 ZNF260Q3ZCT1 412 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 PRAMEF5Q5TYX0 476 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 GAPTQ8N292 157 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 PNKDQ8N490 385 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 ACOT12Q8WYK0 555 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 CORO2AQ92828 525 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 GCDHQ92947 438 aaPredicted RBP12.71□□□□□ -0.37
SMCO4-206ENST00000596676 ZNF714Q96N38 554 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 NDUFA13Q9P0J0 144 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 TRAPPC2LQ9UL33 140 aa12.71□□□□□ -0.37
SMCO4-206ENST00000596676 TRGV10A0A0A0MS01 117 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 FUOMA2VDF0 154 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 FAM172BPA6NC97 362 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 TMEM235A6NFC5 223 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 C17orf98A8MV24 154 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 TMEM127O75204 238 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 GATA3P23771 443 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 PAX5Q02548 391 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 METTL11BQ5VVY1 283 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 HCP5Q6MZN7 132 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 LAX1Q8IWV1 398 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 MCFD2Q8NI22 146 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 SETD6Q8TBK2 473 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 MAFIPQ8WZ33 124 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 TNFRSF14Q92956 283 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 LHX4Q969G2 390 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 CMSS1Q9BQ75 279 aaKnown RBP12.7□□□□□ -0.38
SMCO4-206ENST00000596676 CHMP1AQ9HD42 196 aaPredicted RBP12.7□□□□□ -0.38
SMCO4-206ENST00000596676 ZNF230Q9UIE0 474 aaPredicted RBP12.7□□□□□ -0.38
SMCO4-206ENST00000596676 UBE2J1Q9Y385 318 aaPredicted RBP12.7□□□□□ -0.38
SMCO4-206ENST00000596676 KPTNQ9Y664 436 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms